RNA–Protein interactions for RNA: ENST00000585600.5

LAMA3-204, Transcript of laminin subunit alpha 3, humanhuman

TSL 1 (best)

Gene LAMA3, Length 1,815 nt, Biotype non stop decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-204ENST00000585600 MON2Q7Z3U7 1717 aa30.56■■■□□ 2.48
LAMA3-204ENST00000585600 PSME1Q06323 249 aa30.55■■■□□ 2.48
LAMA3-204ENST00000585600 DDX17Q92841 729 aaKnown RBP30.54■■■□□ 2.48
LAMA3-204ENST00000585600 GGNBP2Q9H3C7 697 aa30.54■■■□□ 2.48
LAMA3-204ENST00000585600 PARD3Q8TEW0 1356 aa30.53■■■□□ 2.48
LAMA3-204ENST00000585600 NME9Q86XW9 330 aa30.53■■■□□ 2.48
LAMA3-204ENST00000585600 XPCQ01831 940 aaPredicted RBP30.52■■■□□ 2.48
LAMA3-204ENST00000585600 CERKQ8TCT0 537 aa30.52■■■□□ 2.48
LAMA3-204ENST00000585600 KIF1AQ12756 1690 aa30.51■■■□□ 2.48
LAMA3-204ENST00000585600 NRKQ7Z2Y5 1582 aa30.51■■■□□ 2.47
LAMA3-204ENST00000585600 RALBP1Q15311 655 aa30.51■■■□□ 2.47
LAMA3-204ENST00000585600 KRT28Q7Z3Y7 464 aa30.5■■■□□ 2.47
LAMA3-204ENST00000585600 ZRANB1Q9UGI0 708 aa30.5■■■□□ 2.47
LAMA3-204ENST00000585600 NSD2O96028 1365 aa30.5■■■□□ 2.47
LAMA3-204ENST00000585600 TTC21AQ8NDW8 1320 aa30.49■■■□□ 2.47
LAMA3-204ENST00000585600 BRD4O60885 1362 aaPredicted RBP30.48■■■□□ 2.47
LAMA3-204ENST00000585600 NPHP3Q7Z494 1330 aa30.47■■■□□ 2.47
LAMA3-204ENST00000585600 IQSEC2Q5JU85 1478 aa30.47■■■□□ 2.47
LAMA3-204ENST00000585600 TOM1O60784 492 aa30.46■■■□□ 2.47
LAMA3-204ENST00000585600 PAK3O75914 559 aaPredicted RBP30.46■■■□□ 2.47
LAMA3-204ENST00000585600 MORC1Q86VD1 984 aa30.45■■■□□ 2.47
LAMA3-204ENST00000585600 PXDNQ92626 1479 aa30.41■■■□□ 2.46
LAMA3-204ENST00000585600 UBAP1LF5GYI3 381 aa30.41■■■□□ 2.46
LAMA3-204ENST00000585600 ABTB2Q8N961 1025 aa30.4■■■□□ 2.46
LAMA3-204ENST00000585600 SUPT16HQ9Y5B9 1047 aaKnown RBP30.4■■■□□ 2.46
LAMA3-204ENST00000585600 MYBBP1AQ9BQG0 1328 aaKnown RBP30.4■■■□□ 2.46
LAMA3-204ENST00000585600 SOS2Q07890 1332 aaPredicted RBP30.39■■■□□ 2.46
LAMA3-204ENST00000585600 TNNT2P45379 298 aaPredicted RBP30.39■■■□□ 2.46
LAMA3-204ENST00000585600 COG3Q96JB2 828 aa30.39■■■□□ 2.46
LAMA3-204ENST00000585600 USP31Q70CQ4 1352 aa30.39■■■□□ 2.46
LAMA3-204ENST00000585600 PPP2R1AP30153 589 aa30.38■■■□□ 2.45
LAMA3-204ENST00000585600 OVOS2A0A0J9YW53 1432 aa30.38■■■□□ 2.45
LAMA3-204ENST00000585600 OVOS2Q6IE36 1432 aa30.38■■■□□ 2.45
LAMA3-204ENST00000585600 NUTM2GQ5VZR2 741 aa30.38■■■□□ 2.45
LAMA3-204ENST00000585600 SBNO1A3KN83 1393 aa30.37■■■□□ 2.45
LAMA3-204ENST00000585600 NLRP6P59044 892 aa30.37■■■□□ 2.45
LAMA3-204ENST00000585600 CCDC184Q52MB2 194 aa30.37■■■□□ 2.45
LAMA3-204ENST00000585600 KIF20BQ96Q89 1820 aa30.36■■■□□ 2.45
LAMA3-204ENST00000585600 TRPM3Q9HCF6 1732 aaPredicted RBP30.36■■■□□ 2.45
LAMA3-204ENST00000585600 PIP4K2BP78356 416 aa30.36■■■□□ 2.45
LAMA3-204ENST00000585600 PIK3C2AO00443 1686 aa30.36■■■□□ 2.45
LAMA3-204ENST00000585600 ROBO1Q9Y6N7 1651 aa30.35■■■□□ 2.45
LAMA3-204ENST00000585600 FBLN1P23142 703 aa30.35■■■□□ 2.45
LAMA3-204ENST00000585600 SPATA31A3Q5VYP0 1347 aa30.33■■■□□ 2.45
LAMA3-204ENST00000585600 LMOD2Q6P5Q4 547 aa30.31■■■□□ 2.44
LAMA3-204ENST00000585600 NLRP13Q86W25 1043 aa30.31■■■□□ 2.44
LAMA3-204ENST00000585600 NHSL1Q5SYE7 1610 aa30.31■■■□□ 2.44
LAMA3-204ENST00000585600 ANKRD26Q9UPS8 1709 aa30.31■■■□□ 2.44
LAMA3-204ENST00000585600 TNS3Q68CZ2 1445 aa30.3■■■□□ 2.44
LAMA3-204ENST00000585600 AHDC1Q5TGY3 1603 aaPredicted RBP30.26■■■□□ 2.44
LAMA3-204ENST00000585600 ALS2Q96Q42 1657 aa30.26■■■□□ 2.43
LAMA3-204ENST00000585600 AATKQ6ZMQ8 1374 aa30.25■■■□□ 2.43
LAMA3-204ENST00000585600 SOX12O15370 315 aa30.24■■■□□ 2.43
LAMA3-204ENST00000585600 MTHFSP49914 203 aa30.24■■■□□ 2.43
LAMA3-204ENST00000585600 MRS2Q9HD23 443 aa30.24■■■□□ 2.43
LAMA3-204ENST00000585600 POLKQ9UBT6 870 aa30.24■■■□□ 2.43
LAMA3-204ENST00000585600 MARF1Q9Y4F3 1742 aaKnown RBP30.23■■■□□ 2.43
LAMA3-204ENST00000585600 USP54Q70EL1 1684 aa30.23■■■□□ 2.43
LAMA3-204ENST00000585600 USP19O94966 1318 aa30.23■■■□□ 2.43
LAMA3-204ENST00000585600 RRS1Q15050 365 aaKnown RBP30.22■■■□□ 2.43
LAMA3-204ENST00000585600 ARHGEF10O15013 1369 aa30.22■■■□□ 2.43
LAMA3-204ENST00000585600 PLEKHG5O94827 1062 aa30.22■■■□□ 2.43
LAMA3-204ENST00000585600 LRRC59Q96AG4 307 aaKnown RBP30.2■■■□□ 2.43
LAMA3-204ENST00000585600 EMILIN1Q9Y6C2 1016 aa30.2■■■□□ 2.43
LAMA3-204ENST00000585600 GCP02774 474 aa30.19■■■□□ 2.42
LAMA3-204ENST00000585600 CABLES1Q8TDN4 633 aa30.18■■■□□ 2.42
LAMA3-204ENST00000585600 MED1Q15648 1581 aaPredicted RBP30.17■■■□□ 2.42
LAMA3-204ENST00000585600 SLIT3O75094 1523 aa30.17■■■□□ 2.42
LAMA3-204ENST00000585600 KCNH5Q8NCM2 988 aa30.17■■■□□ 2.42
LAMA3-204ENST00000585600 HNRNPUQ00839 825 aaKnown RBP eCLIP30.16■■■□□ 2.42
LAMA3-204ENST00000585600 MAP3K19Q56UN5 1328 aa30.15■■■□□ 2.42
LAMA3-204ENST00000585600 SMG6Q86US8 1419 aaKnown RBP30.14■■■□□ 2.42
LAMA3-204ENST00000585600 PPM1GO15355 546 aaPredicted RBP30.14■■■□□ 2.42
LAMA3-204ENST00000585600 NFAT5O94916 1531 aa30.13■■■□□ 2.41
LAMA3-204ENST00000585600 COL16A1Q07092 1604 aaPredicted RBP30.13■■■□□ 2.41
LAMA3-204ENST00000585600 PNISRQ8TF01 805 aaKnown RBP30.12■■■□□ 2.41
LAMA3-204ENST00000585600 PNPLA6Q8IY17 1366 aa30.12■■■□□ 2.41
LAMA3-204ENST00000585600 PHLPP1O60346 1717 aa30.1■■■□□ 2.41
LAMA3-204ENST00000585600 ARHGEF25Q86VW2 580 aa30.09■■■□□ 2.41
LAMA3-204ENST00000585600 INSRP06213 1382 aa30.08■■■□□ 2.41
LAMA3-204ENST00000585600 CFAP53Q96M91 514 aa30.08■■■□□ 2.41
LAMA3-204ENST00000585600 NEFLP07196 543 aa30.07■■■□□ 2.4
LAMA3-204ENST00000585600 MAP2P11137 1827 aaKnown RBP30.07■■■□□ 2.4
LAMA3-204ENST00000585600 ZC3H6P61129 1189 aaKnown RBP30.06■■■□□ 2.4
LAMA3-204ENST00000585600 FKBP8Q14318 412 aa30.06■■■□□ 2.4
LAMA3-204ENST00000585600 COL3A1P02461 1466 aaPredicted RBP30.06■■■□□ 2.4
LAMA3-204ENST00000585600 CDK12Q9NYV4 1490 aaPredicted RBP30.05■■■□□ 2.4
LAMA3-204ENST00000585600 AMPHP49418 695 aa30.05■■■□□ 2.4
LAMA3-204ENST00000585600 HSP90AB2PQ58FF8 381 aa30.05■■■□□ 2.4
LAMA3-204ENST00000585600 FAM9BQ8IZU0 186 aa30.05■■■□□ 2.4
LAMA3-204ENST00000585600 CRYBG1Q9Y4K1 1723 aa30.05■■■□□ 2.4
LAMA3-204ENST00000585600 PEAK1Q9H792 1746 aa30.04■■■□□ 2.4
LAMA3-204ENST00000585600 HOXC9P31274 260 aa30.03■■■□□ 2.4
LAMA3-204ENST00000585600 PHRF1Q9P1Y6 1649 aaKnown RBP30.03■■■□□ 2.4
LAMA3-204ENST00000585600 FLT4P35916 1363 aa30.03■■■□□ 2.4
LAMA3-204ENST00000585600 KIF24Q5T7B8 1368 aa30.02■■■□□ 2.4
LAMA3-204ENST00000585600 HSPA1LP34931 641 aa30.01■■■□□ 2.4
LAMA3-204ENST00000585600 ZBTB7CA1YPR0 619 aa30.01■■■□□ 2.39
LAMA3-204ENST00000585600 IP6K1Q92551 441 aa30.01■■■□□ 2.39
LAMA3-204ENST00000585600 DIAPH1O60610 1272 aaKnown RBP30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms