RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 TESK2Q96S53 571 aa19.28■□□□□ 0.68
TRAF4-215ENST00000584944 RGPD8O14715 1765 aaPredicted RBP19.27■□□□□ 0.68
TRAF4-215ENST00000584944 GJD4Q96KN9 370 aaPredicted RBP19.26■□□□□ 0.67
TRAF4-215ENST00000584944 PRR36Q9H6K5 1346 aa19.25■□□□□ 0.67
TRAF4-215ENST00000584944 PPIP5K1Q6PFW1 1433 aa19.25■□□□□ 0.67
TRAF4-215ENST00000584944 ATP7BP35670 1465 aa19.25■□□□□ 0.67
TRAF4-215ENST00000584944 ITSN1Q15811 1721 aa19.25■□□□□ 0.67
TRAF4-215ENST00000584944 UNC5CLQ8IV45 518 aa19.24■□□□□ 0.67
TRAF4-215ENST00000584944 PUS7Q96PZ0 661 aaKnown RBP19.24■□□□□ 0.67
TRAF4-215ENST00000584944 CABP1Q9NZU7 370 aa19.24■□□□□ 0.67
TRAF4-215ENST00000584944 SLIT2O94813 1529 aa19.24■□□□□ 0.67
TRAF4-215ENST00000584944 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.23■□□□□ 0.67
TRAF4-215ENST00000584944 PAK3O75914 559 aaPredicted RBP19.23■□□□□ 0.67
TRAF4-215ENST00000584944 LMOD2Q6P5Q4 547 aa19.23■□□□□ 0.67
TRAF4-215ENST00000584944 EP400Q96L91 3159 aa19.22■□□□□ 0.67
TRAF4-215ENST00000584944 HDGFL2Q7Z4V5 671 aaPredicted RBP19.22■□□□□ 0.67
TRAF4-215ENST00000584944 TERF2IPQ9NYB0 399 aa19.22■□□□□ 0.67
TRAF4-215ENST00000584944 TNS3Q68CZ2 1445 aa19.22■□□□□ 0.67
TRAF4-215ENST00000584944 SBNO1A3KN83 1393 aa19.21■□□□□ 0.67
TRAF4-215ENST00000584944 USP32Q8NFA0 1604 aa19.21■□□□□ 0.67
TRAF4-215ENST00000584944 ACEP12821 1306 aa19.21■□□□□ 0.67
TRAF4-215ENST00000584944 PLEKHG3A1L390 1219 aa19.2■□□□□ 0.66
TRAF4-215ENST00000584944 NINLQ9Y2I6 1382 aa19.19■□□□□ 0.66
TRAF4-215ENST00000584944 CABLES1Q8TDN4 633 aa19.19■□□□□ 0.66
TRAF4-215ENST00000584944 GLI3P10071 1580 aa19.19■□□□□ 0.66
TRAF4-215ENST00000584944 ZNF692Q9BU19 519 aaPredicted RBP19.18■□□□□ 0.66
TRAF4-215ENST00000584944 HAP1P54257 671 aaPredicted RBP19.17■□□□□ 0.66
TRAF4-215ENST00000584944 CCDC125Q86Z20 511 aa19.17■□□□□ 0.66
TRAF4-215ENST00000584944 ARHGEF10O15013 1369 aa19.17■□□□□ 0.66
TRAF4-215ENST00000584944 SLC12A5Q9H2X9 1139 aa19.16■□□□□ 0.66
TRAF4-215ENST00000584944 VPS72Q15906 364 aa19.15■□□□□ 0.66
TRAF4-215ENST00000584944 KTN1Q86UP2 1357 aaKnown RBP19.15■□□□□ 0.66
TRAF4-215ENST00000584944 SRCAPQ6ZRS2 3230 aa19.15■□□□□ 0.66
TRAF4-215ENST00000584944 TOPAZ1Q8N9V7 1692 aa19.14■□□□□ 0.66
TRAF4-215ENST00000584944 PLEKHG5O94827 1062 aa19.14■□□□□ 0.65
TRAF4-215ENST00000584944 POLR3AO14802 1390 aaPredicted RBP19.14■□□□□ 0.65
TRAF4-215ENST00000584944 ABCA3Q99758 1704 aa19.14■□□□□ 0.65
TRAF4-215ENST00000584944 NWD2Q9ULI1 1742 aa19.13■□□□□ 0.65
TRAF4-215ENST00000584944 FAM83GA6ND36 823 aa19.12■□□□□ 0.65
TRAF4-215ENST00000584944 TRPM3Q9HCF6 1732 aaPredicted RBP19.11■□□□□ 0.65
TRAF4-215ENST00000584944 PLCH1Q4KWH8 1693 aa19.11■□□□□ 0.65
TRAF4-215ENST00000584944 ONECUT3O60422 494 aaPredicted RBP19.11■□□□□ 0.65
TRAF4-215ENST00000584944 SEPT12Q8IYM1 358 aa19.11■□□□□ 0.65
TRAF4-215ENST00000584944 ABTB2Q8N961 1025 aa19.11■□□□□ 0.65
TRAF4-215ENST00000584944 BRWD3Q6RI45 1802 aa19.11■□□□□ 0.65
TRAF4-215ENST00000584944 BRD4O60885 1362 aaPredicted RBP19.1■□□□□ 0.65
TRAF4-215ENST00000584944 ZRANB1Q9UGI0 708 aa19.1■□□□□ 0.65
TRAF4-215ENST00000584944 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.09■□□□□ 0.65
TRAF4-215ENST00000584944 USP6P35125 1406 aa19.08■□□□□ 0.65
TRAF4-215ENST00000584944 ALS2Q96Q42 1657 aa19.08■□□□□ 0.65
TRAF4-215ENST00000584944 KIF7Q2M1P5 1343 aa19.08■□□□□ 0.65
TRAF4-215ENST00000584944 BLMP54132 1417 aaPredicted RBP19.08■□□□□ 0.64
TRAF4-215ENST00000584944 A0A1W2PP64 1363 aa19.07■□□□□ 0.64
TRAF4-215ENST00000584944 ANKRD36BQ8N2N9 1353 aa19.07■□□□□ 0.64
TRAF4-215ENST00000584944 CCDC9Q9Y3X0 531 aaKnown RBP19.07■□□□□ 0.64
TRAF4-215ENST00000584944 TTC21AQ8NDW8 1320 aa19.06■□□□□ 0.64
TRAF4-215ENST00000584944 NUTM2GQ5VZR2 741 aa19.06■□□□□ 0.64
TRAF4-215ENST00000584944 CPSF1Q10570 1443 aaKnown RBP19.06■□□□□ 0.64
TRAF4-215ENST00000584944 C11orf95C9JLR9 678 aaPredicted RBP19.05■□□□□ 0.64
TRAF4-215ENST00000584944 NLRP6P59044 892 aa19.05■□□□□ 0.64
TRAF4-215ENST00000584944 NLRP13Q86W25 1043 aa19.05■□□□□ 0.64
TRAF4-215ENST00000584944 EDC4Q6P2E9 1401 aaKnown RBP19.05■□□□□ 0.64
TRAF4-215ENST00000584944 TTC21BQ7Z4L5 1316 aa19.04■□□□□ 0.64
TRAF4-215ENST00000584944 NRAPQ86VF7 1730 aa19.04■□□□□ 0.64
TRAF4-215ENST00000584944 BTG4Q9NY30 223 aa19.04■□□□□ 0.64
TRAF4-215ENST00000584944 CCDC7Q96M83 1385 aa19.04■□□□□ 0.64
TRAF4-215ENST00000584944 KRT27Q7Z3Y8 459 aa19.03■□□□□ 0.64
TRAF4-215ENST00000584944 COL14A1Q05707 1796 aaKnown RBP19.02■□□□□ 0.64
TRAF4-215ENST00000584944 DEFB132Q7Z7B7 95 aa19.02■□□□□ 0.64
TRAF4-215ENST00000584944 PANK3Q9H999 370 aa19.02■□□□□ 0.64
TRAF4-215ENST00000584944 KNSTRNQ9Y448 316 aa19.02■□□□□ 0.64
TRAF4-215ENST00000584944 WASHC2AQ641Q2 1341 aa19.01■□□□□ 0.63
TRAF4-215ENST00000584944 CRYBG1Q9Y4K1 1723 aa19.01■□□□□ 0.63
TRAF4-215ENST00000584944 CGNL1Q0VF96 1302 aa19■□□□□ 0.63
TRAF4-215ENST00000584944 FAM98CQ17RN3 349 aaKnown RBP19■□□□□ 0.63
TRAF4-215ENST00000584944 AKAP12Q02952 1782 aa19■□□□□ 0.63
TRAF4-215ENST00000584944 CD163L1Q9NR16 1453 aa18.99■□□□□ 0.63
TRAF4-215ENST00000584944 SF3B2Q13435 895 aaKnown RBP18.99■□□□□ 0.63
TRAF4-215ENST00000584944 COG3Q96JB2 828 aa18.99■□□□□ 0.63
TRAF4-215ENST00000584944 NSD3Q9BZ95 1437 aa18.99■□□□□ 0.63
TRAF4-215ENST00000584944 NME9Q86XW9 330 aa18.98■□□□□ 0.63
TRAF4-215ENST00000584944 SPATA31A5Q5VU36 1347 aa18.98■□□□□ 0.63
TRAF4-215ENST00000584944 SPATA31A7Q8IWB4 1347 aa18.98■□□□□ 0.63
TRAF4-215ENST00000584944 MON2Q7Z3U7 1717 aa18.97■□□□□ 0.63
TRAF4-215ENST00000584944 A0A0G2JS52 829 aa18.97■□□□□ 0.63
TRAF4-215ENST00000584944 ZBTB7CA1YPR0 619 aa18.97■□□□□ 0.63
TRAF4-215ENST00000584944 SOX12O15370 315 aa18.97■□□□□ 0.63
TRAF4-215ENST00000584944 MYT1Q01538 1121 aa18.97■□□□□ 0.63
TRAF4-215ENST00000584944 PRDM11Q9NQV5 511 aa18.97■□□□□ 0.63
TRAF4-215ENST00000584944 MYOM1P52179 1685 aa18.96■□□□□ 0.63
TRAF4-215ENST00000584944 KCNH5Q8NCM2 988 aa18.96■□□□□ 0.63
TRAF4-215ENST00000584944 SSH2Q76I76 1423 aa18.94■□□□□ 0.62
TRAF4-215ENST00000584944 ZNF316A6NFI3 1004 aaPredicted RBP18.94■□□□□ 0.62
TRAF4-215ENST00000584944 CARD14Q9BXL6 1004 aa18.94■□□□□ 0.62
TRAF4-215ENST00000584944 KIAA0232Q92628 1395 aa18.93■□□□□ 0.62
TRAF4-215ENST00000584944 GGNBP2Q9H3C7 697 aa18.93■□□□□ 0.62
TRAF4-215ENST00000584944 GCP02774 474 aa18.92■□□□□ 0.62
TRAF4-215ENST00000584944 ZC3H6P61129 1189 aaKnown RBP18.92■□□□□ 0.62
TRAF4-215ENST00000584944 CHRNA2Q15822 529 aa18.92■□□□□ 0.62
TRAF4-215ENST00000584944 NRKQ7Z2Y5 1582 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms