RNA–Protein interactions for RNA: ENST00000584099.1

ERBB2-217, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 4

Gene ERBB2, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-217ENST00000584099 ITSN1Q15811 1721 aa18.62■□□□□ 0.57
ERBB2-217ENST00000584099 GLI3P10071 1580 aa18.61■□□□□ 0.57
ERBB2-217ENST00000584099 EP400Q96L91 3159 aa18.61■□□□□ 0.57
ERBB2-217ENST00000584099 SEPT12Q8IYM1 358 aa18.6■□□□□ 0.57
ERBB2-217ENST00000584099 BTG4Q9NY30 223 aa18.6■□□□□ 0.57
ERBB2-217ENST00000584099 SRPK2P78362 688 aaKnown RBP18.59■□□□□ 0.57
ERBB2-217ENST00000584099 ABCA3Q99758 1704 aa18.59■□□□□ 0.57
ERBB2-217ENST00000584099 SIN3AQ96ST3 1273 aa18.58■□□□□ 0.56
ERBB2-217ENST00000584099 PRDM11Q9NQV5 511 aa18.58■□□□□ 0.56
ERBB2-217ENST00000584099 CCDC9Q9Y3X0 531 aaKnown RBP18.57■□□□□ 0.56
ERBB2-217ENST00000584099 COL14A1Q05707 1796 aaKnown RBP18.57■□□□□ 0.56
ERBB2-217ENST00000584099 BLMP54132 1417 aaPredicted RBP18.57■□□□□ 0.56
ERBB2-217ENST00000584099 TOPAZ1Q8N9V7 1692 aa18.57■□□□□ 0.56
ERBB2-217ENST00000584099 EVC2Q86UK5 1308 aa18.56■□□□□ 0.56
ERBB2-217ENST00000584099 PPIP5K1Q6PFW1 1433 aa18.56■□□□□ 0.56
ERBB2-217ENST00000584099 ROCK2O75116 1388 aaKnown RBP18.55■□□□□ 0.56
ERBB2-217ENST00000584099 CPDO75976 1380 aa18.55■□□□□ 0.56
ERBB2-217ENST00000584099 USP19O94966 1318 aa18.55■□□□□ 0.56
ERBB2-217ENST00000584099 SPATA31A5Q5VU36 1347 aa18.55■□□□□ 0.56
ERBB2-217ENST00000584099 SPATA31A7Q8IWB4 1347 aa18.55■□□□□ 0.56
ERBB2-217ENST00000584099 PLCH1Q4KWH8 1693 aa18.55■□□□□ 0.56
ERBB2-217ENST00000584099 KRT27Q7Z3Y8 459 aa18.55■□□□□ 0.56
ERBB2-217ENST00000584099 NLRP13Q86W25 1043 aa18.55■□□□□ 0.56
ERBB2-217ENST00000584099 ABTB2Q8N961 1025 aa18.54■□□□□ 0.56
ERBB2-217ENST00000584099 KIAA0232Q92628 1395 aa18.54■□□□□ 0.56
ERBB2-217ENST00000584099 SBNO2Q9Y2G9 1366 aa18.54■□□□□ 0.56
ERBB2-217ENST00000584099 PLEKHG5O94827 1062 aa18.53■□□□□ 0.56
ERBB2-217ENST00000584099 NEUROD1Q13562 356 aa18.53■□□□□ 0.56
ERBB2-217ENST00000584099 CABP2Q9NPB3 220 aa18.53■□□□□ 0.56
ERBB2-217ENST00000584099 ZNF692Q9BU19 519 aaPredicted RBP18.52■□□□□ 0.56
ERBB2-217ENST00000584099 CRYBG1Q9Y4K1 1723 aa18.52■□□□□ 0.55
ERBB2-217ENST00000584099 CABP1Q9NZU7 370 aa18.51■□□□□ 0.55
ERBB2-217ENST00000584099 TRPM1Q7Z4N2 1603 aa18.51■□□□□ 0.55
ERBB2-217ENST00000584099 USP6P35125 1406 aa18.5■□□□□ 0.55
ERBB2-217ENST00000584099 NRAPQ86VF7 1730 aa18.5■□□□□ 0.55
ERBB2-217ENST00000584099 FAM98CQ17RN3 349 aaKnown RBP18.5■□□□□ 0.55
ERBB2-217ENST00000584099 ZRANB1Q9UGI0 708 aa18.5■□□□□ 0.55
ERBB2-217ENST00000584099 SPATA31A1Q5TZJ5 1347 aa18.49■□□□□ 0.55
ERBB2-217ENST00000584099 GCP02774 474 aa18.49■□□□□ 0.55
ERBB2-217ENST00000584099 SF3B2Q13435 895 aaKnown RBP18.49■□□□□ 0.55
ERBB2-217ENST00000584099 SSH2Q76I76 1423 aa18.49■□□□□ 0.55
ERBB2-217ENST00000584099 SRCAPQ6ZRS2 3230 aa18.47■□□□□ 0.55
ERBB2-217ENST00000584099 SLC24A1O60721 1099 aa18.47■□□□□ 0.55
ERBB2-217ENST00000584099 ZC3H6P61129 1189 aaKnown RBP18.47■□□□□ 0.55
ERBB2-217ENST00000584099 BARGINQ6ZT62 677 aa18.47■□□□□ 0.55
ERBB2-217ENST00000584099 QRICH2Q9H0J4 1663 aa18.47■□□□□ 0.55
ERBB2-217ENST00000584099 TONSLQ96HA7 1378 aa18.46■□□□□ 0.55
ERBB2-217ENST00000584099 TRIM26Q12899 539 aaPredicted RBP18.46■□□□□ 0.55
ERBB2-217ENST00000584099 PUS7Q96PZ0 661 aaKnown RBP18.46■□□□□ 0.55
ERBB2-217ENST00000584099 THRAP3Q9Y2W1 955 aaKnown RBP18.46■□□□□ 0.55
ERBB2-217ENST00000584099 A0A0G2JS52 829 aa18.45■□□□□ 0.54
ERBB2-217ENST00000584099 MYT1Q01538 1121 aa18.45■□□□□ 0.54
ERBB2-217ENST00000584099 NUTM2GQ5VZR2 741 aa18.45■□□□□ 0.54
ERBB2-217ENST00000584099 PHRF1Q9P1Y6 1649 aaKnown RBP18.45■□□□□ 0.54
ERBB2-217ENST00000584099 NRKQ7Z2Y5 1582 aa18.44■□□□□ 0.54
ERBB2-217ENST00000584099 EVA1CP58658 441 aa18.44■□□□□ 0.54
ERBB2-217ENST00000584099 NLRP6P59044 892 aa18.44■□□□□ 0.54
ERBB2-217ENST00000584099 CHRNA2Q15822 529 aa18.44■□□□□ 0.54
ERBB2-217ENST00000584099 CARD11Q9BXL7 1154 aa18.44■□□□□ 0.54
ERBB2-217ENST00000584099 TTC21AQ8NDW8 1320 aa18.44■□□□□ 0.54
ERBB2-217ENST00000584099 AATKQ6ZMQ8 1374 aa18.43■□□□□ 0.54
ERBB2-217ENST00000584099 CPSF1Q10570 1443 aaKnown RBP18.43■□□□□ 0.54
ERBB2-217ENST00000584099 C11orf95C9JLR9 678 aaPredicted RBP18.42■□□□□ 0.54
ERBB2-217ENST00000584099 KCNH5Q8NCM2 988 aa18.42■□□□□ 0.54
ERBB2-217ENST00000584099 THSD7AQ9UPZ6 1657 aa18.41■□□□□ 0.54
ERBB2-217ENST00000584099 SLIT3O75094 1523 aa18.41■□□□□ 0.54
ERBB2-217ENST00000584099 BAG6P46379 1132 aa18.41■□□□□ 0.54
ERBB2-217ENST00000584099 TCP11L2Q8N4U5 519 aa18.41■□□□□ 0.54
ERBB2-217ENST00000584099 STRN4Q9NRL3 753 aa18.41■□□□□ 0.54
ERBB2-217ENST00000584099 FAM196AQ6ZSG2 479 aa18.4■□□□□ 0.54
ERBB2-217ENST00000584099 TTC21BQ7Z4L5 1316 aa18.4■□□□□ 0.54
ERBB2-217ENST00000584099 CAMTA1Q9Y6Y1 1673 aa18.4■□□□□ 0.54
ERBB2-217ENST00000584099 DISP2A7MBM2 1401 aa18.4■□□□□ 0.54
ERBB2-217ENST00000584099 LMO7Q8WWI1 1683 aa18.38■□□□□ 0.53
ERBB2-217ENST00000584099 BRWD3Q6RI45 1802 aa18.38■□□□□ 0.53
ERBB2-217ENST00000584099 COL5A2P05997 1499 aaPredicted RBP18.38■□□□□ 0.53
ERBB2-217ENST00000584099 LARP1Q6PKG0 1096 aaKnown RBP18.37■□□□□ 0.53
ERBB2-217ENST00000584099 DEFB132Q7Z7B7 95 aa18.37■□□□□ 0.53
ERBB2-217ENST00000584099 CRB1P82279 1406 aa18.36■□□□□ 0.53
ERBB2-217ENST00000584099 KTN1Q86UP2 1357 aaKnown RBP18.36■□□□□ 0.53
ERBB2-217ENST00000584099 USP31Q70CQ4 1352 aa18.35■□□□□ 0.53
ERBB2-217ENST00000584099 PARD3Q8TEW0 1356 aa18.35■□□□□ 0.53
ERBB2-217ENST00000584099 NINLQ9Y2I6 1382 aa18.35■□□□□ 0.53
ERBB2-217ENST00000584099 PDE3BQ13370 1112 aa18.35■□□□□ 0.53
ERBB2-217ENST00000584099 ARHGEF25Q86VW2 580 aa18.35■□□□□ 0.53
ERBB2-217ENST00000584099 CDCA7Q9BWT1 371 aaPredicted RBP18.35■□□□□ 0.53
ERBB2-217ENST00000584099 TIMELESSQ9UNS1 1208 aa18.34■□□□□ 0.53
ERBB2-217ENST00000584099 TERF2IPQ9NYB0 399 aa18.33■□□□□ 0.52
ERBB2-217ENST00000584099 USP35Q9P2H5 1018 aa18.33■□□□□ 0.52
ERBB2-217ENST00000584099 ABCC6O95255 1503 aa18.33■□□□□ 0.52
ERBB2-217ENST00000584099 WDR17Q8IZU2 1322 aa18.32■□□□□ 0.52
ERBB2-217ENST00000584099 HDGFL2Q7Z4V5 671 aaPredicted RBP18.32■□□□□ 0.52
ERBB2-217ENST00000584099 PIK3C2AO00443 1686 aa18.31■□□□□ 0.52
ERBB2-217ENST00000584099 CLSPNQ9HAW4 1339 aa18.3■□□□□ 0.52
ERBB2-217ENST00000584099 TESK2Q96S53 571 aa18.3■□□□□ 0.52
ERBB2-217ENST00000584099 EDC4Q6P2E9 1401 aaKnown RBP18.29■□□□□ 0.52
ERBB2-217ENST00000584099 CD163L1Q9NR16 1453 aa18.28■□□□□ 0.52
ERBB2-217ENST00000584099 TOM1L2Q6ZVM7 507 aa18.28■□□□□ 0.52
ERBB2-217ENST00000584099 CARD10Q9BWT7 1032 aa18.28■□□□□ 0.52
ERBB2-217ENST00000584099 AXIN2Q9Y2T1 843 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms