RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 C8orf37Q96NL8 207 aa11.8□□□□□ -0.52
SMCHD1-210ENST00000583800 PRAG1Q86YV5 1406 aa11.78□□□□□ -0.52
SMCHD1-210ENST00000583800 COL22A1Q8NFW1 1626 aaPredicted RBP11.78□□□□□ -0.52
SMCHD1-210ENST00000583800 HFM1A2PYH4 1435 aa11.77□□□□□ -0.52
SMCHD1-210ENST00000583800 IFT172Q9UG01 1749 aa11.77□□□□□ -0.52
SMCHD1-210ENST00000583800 ORAI2Q96SN7 254 aa11.77□□□□□ -0.53
SMCHD1-210ENST00000583800 SGIP1Q9BQI5 828 aa11.77□□□□□ -0.53
SMCHD1-210ENST00000583800 TRIM35Q9UPQ4 493 aa11.77□□□□□ -0.53
SMCHD1-210ENST00000583800 MARF1Q9Y4F3 1742 aaKnown RBP11.77□□□□□ -0.53
SMCHD1-210ENST00000583800 CDC42BPGQ6DT37 1551 aa11.76□□□□□ -0.53
SMCHD1-210ENST00000583800 VGFO15240 615 aaPredicted RBP11.76□□□□□ -0.53
SMCHD1-210ENST00000583800 ADAMTS2O95450 1211 aa11.76□□□□□ -0.53
SMCHD1-210ENST00000583800 IER5LQ5T953 404 aa11.76□□□□□ -0.53
SMCHD1-210ENST00000583800 QTRT2Q9H974 415 aaKnown RBP11.76□□□□□ -0.53
SMCHD1-210ENST00000583800 RBM6P78332 1123 aaKnown RBP11.75□□□□□ -0.53
SMCHD1-210ENST00000583800 SOS2Q07890 1332 aaPredicted RBP11.75□□□□□ -0.53
SMCHD1-210ENST00000583800 KNDC1Q76NI1 1749 aa11.74□□□□□ -0.53
SMCHD1-210ENST00000583800 TPRNQ4KMQ1 711 aa11.74□□□□□ -0.53
SMCHD1-210ENST00000583800 NGLY1Q96IV0 654 aa11.74□□□□□ -0.53
SMCHD1-210ENST00000583800 PCDHB13Q9Y5F0 798 aa11.74□□□□□ -0.53
SMCHD1-210ENST00000583800 RPGRIP1LQ68CZ1 1315 aa11.74□□□□□ -0.53
SMCHD1-210ENST00000583800 CDAN1Q8IWY9 1227 aa11.73□□□□□ -0.53
SMCHD1-210ENST00000583800 PXDNQ92626 1479 aa11.72□□□□□ -0.53
SMCHD1-210ENST00000583800 MYOM2P54296 1465 aa11.71□□□□□ -0.53
SMCHD1-210ENST00000583800 ADGRF5Q8IZF2 1346 aa11.71□□□□□ -0.53
SMCHD1-210ENST00000583800 VASPP50552 380 aaPredicted RBP11.71□□□□□ -0.53
SMCHD1-210ENST00000583800 PLCD3Q8N3E9 789 aa11.71□□□□□ -0.53
SMCHD1-210ENST00000583800 USP21Q9UK80 565 aa11.71□□□□□ -0.53
SMCHD1-210ENST00000583800 FMN2Q9NZ56 1722 aa11.71□□□□□ -0.54
SMCHD1-210ENST00000583800 CCDC144AA2RUR9 1427 aa11.7□□□□□ -0.54
SMCHD1-210ENST00000583800 ATRNO75882 1429 aa11.7□□□□□ -0.54
SMCHD1-210ENST00000583800 RGPD8O14715 1765 aaPredicted RBP11.7□□□□□ -0.54
SMCHD1-210ENST00000583800 TECPR2O15040 1411 aa11.69□□□□□ -0.54
SMCHD1-210ENST00000583800 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.69□□□□□ -0.54
SMCHD1-210ENST00000583800 NPHP3Q7Z494 1330 aa11.69□□□□□ -0.54
SMCHD1-210ENST00000583800 XPCQ01831 940 aaPredicted RBP11.69□□□□□ -0.54
SMCHD1-210ENST00000583800 ESCO1Q5FWF5 840 aa11.69□□□□□ -0.54
SMCHD1-210ENST00000583800 TRPC5Q9UL62 973 aaPredicted RBP11.69□□□□□ -0.54
SMCHD1-210ENST00000583800 SPATA31E1Q6ZUB1 1445 aa11.69□□□□□ -0.54
SMCHD1-210ENST00000583800 KIF1AQ12756 1690 aa11.68□□□□□ -0.54
SMCHD1-210ENST00000583800 ATAD2Q6PL18 1390 aa11.68□□□□□ -0.54
SMCHD1-210ENST00000583800 PLEKHH1Q9ULM0 1364 aa11.68□□□□□ -0.54
SMCHD1-210ENST00000583800 NUTM2FA1L443 756 aa11.68□□□□□ -0.54
SMCHD1-210ENST00000583800 NUBP1P53384 320 aa11.68□□□□□ -0.54
SMCHD1-210ENST00000583800 FNBP4Q8N3X1 1017 aaPredicted RBP11.68□□□□□ -0.54
SMCHD1-210ENST00000583800 STK26Q9P289 416 aa11.68□□□□□ -0.54
SMCHD1-210ENST00000583800 KDM2AQ9Y2K7 1162 aa11.68□□□□□ -0.54
SMCHD1-210ENST00000583800 FOXO3O43524 673 aa11.67□□□□□ -0.54
SMCHD1-210ENST00000583800 RGL3Q3MIN7 710 aa11.67□□□□□ -0.54
SMCHD1-210ENST00000583800 WAPLQ7Z5K2 1190 aa11.67□□□□□ -0.54
SMCHD1-210ENST00000583800 IFNL1Q8IU54 200 aa11.67□□□□□ -0.54
SMCHD1-210ENST00000583800 SLAIN1Q8ND83 568 aa11.67□□□□□ -0.54
SMCHD1-210ENST00000583800 PIK3C2GO75747 1445 aa11.67□□□□□ -0.54
SMCHD1-210ENST00000583800 LRPPRCP42704 1394 aaKnown RBP11.67□□□□□ -0.54
SMCHD1-210ENST00000583800 BCL9LQ86UU0 1499 aa11.66□□□□□ -0.54
SMCHD1-210ENST00000583800 IFNLR1Q8IU57 520 aaPredicted RBP11.66□□□□□ -0.54
SMCHD1-210ENST00000583800 ANKRD30BQ9BXX2 1392 aa11.66□□□□□ -0.54
SMCHD1-210ENST00000583800 BRWD3Q6RI45 1802 aa11.65□□□□□ -0.54
SMCHD1-210ENST00000583800 USP32Q8NFA0 1604 aa11.65□□□□□ -0.54
SMCHD1-210ENST00000583800 ST18O60284 1047 aa11.65□□□□□ -0.54
SMCHD1-210ENST00000583800 TMEM132EQ6IEE7 984 aa11.65□□□□□ -0.54
SMCHD1-210ENST00000583800 ZBTB47Q9UFB7 747 aaPredicted RBP11.65□□□□□ -0.54
SMCHD1-210ENST00000583800 GLI3P10071 1580 aa11.65□□□□□ -0.54
SMCHD1-210ENST00000583800 ABCA3Q99758 1704 aa11.65□□□□□ -0.54
SMCHD1-210ENST00000583800 YTHDC2Q9H6S0 1430 aaKnown RBP11.64□□□□□ -0.55
SMCHD1-210ENST00000583800 TMEM106CQ9BVX2 250 aa11.64□□□□□ -0.55
SMCHD1-210ENST00000583800 PLCH1Q4KWH8 1693 aa11.64□□□□□ -0.55
SMCHD1-210ENST00000583800 EP400Q96L91 3159 aa11.64□□□□□ -0.55
SMCHD1-210ENST00000583800 ABCC11Q96J66 1382 aa11.64□□□□□ -0.55
SMCHD1-210ENST00000583800 MPHOSPH9Q99550 1183 aa11.63□□□□□ -0.55
SMCHD1-210ENST00000583800 SLIT2O94813 1529 aa11.62□□□□□ -0.55
SMCHD1-210ENST00000583800 SPATA31A3Q5VYP0 1347 aa11.61□□□□□ -0.55
SMCHD1-210ENST00000583800 PLCG2P16885 1265 aa11.61□□□□□ -0.55
SMCHD1-210ENST00000583800 GJD4Q96KN9 370 aaPredicted RBP11.61□□□□□ -0.55
SMCHD1-210ENST00000583800 RALGAPBQ86X10 1494 aa11.61□□□□□ -0.55
SMCHD1-210ENST00000583800 NWD2Q9ULI1 1742 aa11.6□□□□□ -0.55
SMCHD1-210ENST00000583800 NRXN1Q9ULB1 1477 aa11.6□□□□□ -0.55
SMCHD1-210ENST00000583800 TNS3Q68CZ2 1445 aa11.6□□□□□ -0.55
SMCHD1-210ENST00000583800 KRT28Q7Z3Y7 464 aa11.59□□□□□ -0.55
SMCHD1-210ENST00000583800 IRX5P78411 483 aaPredicted RBP11.58□□□□□ -0.56
SMCHD1-210ENST00000583800 UNC5CLQ8IV45 518 aa11.58□□□□□ -0.56
SMCHD1-210ENST00000583800 FAM212AQ96EL1 285 aa11.58□□□□□ -0.56
SMCHD1-210ENST00000583800 TRPM3Q9HCF6 1732 aaPredicted RBP11.57□□□□□ -0.56
SMCHD1-210ENST00000583800 SAFB2Q14151 953 aaKnown RBP eCLIP11.57□□□□□ -0.56
SMCHD1-210ENST00000583800 CFAP70Q5T0N1 1121 aa11.57□□□□□ -0.56
SMCHD1-210ENST00000583800 BBXQ8WY36 941 aaPredicted RBP11.57□□□□□ -0.56
SMCHD1-210ENST00000583800 C14orf93Q9H972 538 aaKnown RBP11.57□□□□□ -0.56
SMCHD1-210ENST00000583800 PHF8Q9UPP1 1060 aa11.57□□□□□ -0.56
SMCHD1-210ENST00000583800 ADGRB2O60241 1585 aa11.57□□□□□ -0.56
SMCHD1-210ENST00000583800 NRAPQ86VF7 1730 aa11.57□□□□□ -0.56
SMCHD1-210ENST00000583800 DHX57Q6P158 1386 aaKnown RBP11.56□□□□□ -0.56
SMCHD1-210ENST00000583800 DLC1Q96QB1 1528 aa11.56□□□□□ -0.56
SMCHD1-210ENST00000583800 CABLES1Q8TDN4 633 aa11.56□□□□□ -0.56
SMCHD1-210ENST00000583800 SIRT1Q96EB6 747 aa11.56□□□□□ -0.56
SMCHD1-210ENST00000583800 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.56□□□□□ -0.56
SMCHD1-210ENST00000583800 SRCAPQ6ZRS2 3230 aa11.56□□□□□ -0.56
SMCHD1-210ENST00000583800 ALS2Q96Q42 1657 aa11.55□□□□□ -0.56
SMCHD1-210ENST00000583800 ADGRB1O14514 1584 aa11.55□□□□□ -0.56
SMCHD1-210ENST00000583800 BLMP54132 1417 aaPredicted RBP11.55□□□□□ -0.56
SMCHD1-210ENST00000583800 CCDC125Q86Z20 511 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms