RNA–Protein interactions for RNA: ENST00000583796.1

IFT20-213, Transcript of intraflagellar transport 20, humanhuman

Gene IFT20, Length 1,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-213ENST00000583796 AMOTL2Q9Y2J4 779 aa13.62□□□□□ -0.23
IFT20-213ENST00000583796 ANKARQ7Z5J8 1434 aa13.62□□□□□ -0.23
IFT20-213ENST00000583796 CFAP53Q96M91 514 aa13.61□□□□□ -0.23
IFT20-213ENST00000583796 NUDT16Q96DE0 195 aaKnown RBP13.61□□□□□ -0.23
IFT20-213ENST00000583796 NUDCQ9Y266 331 aa13.61□□□□□ -0.23
IFT20-213ENST00000583796 SHPRHQ149N8 1683 aa13.6□□□□□ -0.23
IFT20-213ENST00000583796 NPHP4O75161 1426 aaPredicted RBP13.6□□□□□ -0.23
IFT20-213ENST00000583796 NRKQ7Z2Y5 1582 aa13.59□□□□□ -0.23
IFT20-213ENST00000583796 FYB1O15117 783 aa13.59□□□□□ -0.23
IFT20-213ENST00000583796 ADAMTS8Q9UP79 889 aa13.59□□□□□ -0.23
IFT20-213ENST00000583796 NWD1Q149M9 1564 aa13.58□□□□□ -0.24
IFT20-213ENST00000583796 PLEKHG3A1L390 1219 aa13.58□□□□□ -0.24
IFT20-213ENST00000583796 ERICH6BQ5W0A0 696 aa13.58□□□□□ -0.24
IFT20-213ENST00000583796 FMN2Q9NZ56 1722 aa13.56□□□□□ -0.24
IFT20-213ENST00000583796 AATKQ6ZMQ8 1374 aa13.56□□□□□ -0.24
IFT20-213ENST00000583796 PRR36Q9H6K5 1346 aa13.56□□□□□ -0.24
IFT20-213ENST00000583796 SUPT16HQ9Y5B9 1047 aaKnown RBP13.55□□□□□ -0.24
IFT20-213ENST00000583796 PNPLA6Q8IY17 1366 aa13.55□□□□□ -0.24
IFT20-213ENST00000583796 MTHFSP49914 203 aa13.55□□□□□ -0.24
IFT20-213ENST00000583796 USP6P35125 1406 aa13.54□□□□□ -0.24
IFT20-213ENST00000583796 COL3A1P02461 1466 aaPredicted RBP13.54□□□□□ -0.24
IFT20-213ENST00000583796 NKTRP30414 1462 aaKnown RBP13.54□□□□□ -0.24
IFT20-213ENST00000583796 KCNA6P17658 529 aa13.54□□□□□ -0.24
IFT20-213ENST00000583796 GGNBP2Q9H3C7 697 aa13.54□□□□□ -0.24
IFT20-213ENST00000583796 LRRC7Q96NW7 1537 aa13.53□□□□□ -0.24
IFT20-213ENST00000583796 ADGRL3Q9HAR2 1447 aa13.53□□□□□ -0.24
IFT20-213ENST00000583796 NALCNQ8IZF0 1738 aa13.53□□□□□ -0.24
IFT20-213ENST00000583796 CDK12Q9NYV4 1490 aaPredicted RBP13.52□□□□□ -0.24
IFT20-213ENST00000583796 TTC21AQ8NDW8 1320 aa13.52□□□□□ -0.25
IFT20-213ENST00000583796 ZNF521Q96K83 1311 aa13.52□□□□□ -0.25
IFT20-213ENST00000583796 SSH2Q76I76 1423 aa13.51□□□□□ -0.25
IFT20-213ENST00000583796 IQSEC2Q5JU85 1478 aa13.51□□□□□ -0.25
IFT20-213ENST00000583796 RNF123Q5XPI4 1314 aa13.51□□□□□ -0.25
IFT20-213ENST00000583796 USP54Q70EL1 1684 aa13.5□□□□□ -0.25
IFT20-213ENST00000583796 ACEP12821 1306 aa13.5□□□□□ -0.25
IFT20-213ENST00000583796 OVOS2A0A0J9YW53 1432 aa13.5□□□□□ -0.25
IFT20-213ENST00000583796 OVOS2Q6IE36 1432 aa13.5□□□□□ -0.25
IFT20-213ENST00000583796 TNNT2P45379 298 aaPredicted RBP13.49□□□□□ -0.25
IFT20-213ENST00000583796 FKBP8Q14318 412 aa13.49□□□□□ -0.25
IFT20-213ENST00000583796 RUNDC1Q96C34 613 aa13.49□□□□□ -0.25
IFT20-213ENST00000583796 COG3Q96JB2 828 aa13.49□□□□□ -0.25
IFT20-213ENST00000583796 PNNQ9H307 717 aaKnown RBP13.49□□□□□ -0.25
IFT20-213ENST00000583796 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.48□□□□□ -0.25
IFT20-213ENST00000583796 NCOA3Q9Y6Q9 1424 aa13.48□□□□□ -0.25
IFT20-213ENST00000583796 POLA2Q14181 598 aa13.48□□□□□ -0.25
IFT20-213ENST00000583796 CCDC27Q2M243 656 aa13.48□□□□□ -0.25
IFT20-213ENST00000583796 PELP1Q8IZL8 1130 aaKnown RBP13.48□□□□□ -0.25
IFT20-213ENST00000583796 TTC21BQ7Z4L5 1316 aa13.48□□□□□ -0.25
IFT20-213ENST00000583796 USP31Q70CQ4 1352 aa13.47□□□□□ -0.25
IFT20-213ENST00000583796 MAP2P11137 1827 aaKnown RBP13.47□□□□□ -0.25
IFT20-213ENST00000583796 GOLGA2Q08379 1002 aa13.47□□□□□ -0.25
IFT20-213ENST00000583796 RGPD8O14715 1765 aaPredicted RBP13.46□□□□□ -0.26
IFT20-213ENST00000583796 APAF1O14727 1248 aa13.45□□□□□ -0.26
IFT20-213ENST00000583796 DIAPH1O60610 1272 aaKnown RBP13.45□□□□□ -0.26
IFT20-213ENST00000583796 NME9Q86XW9 330 aa13.45□□□□□ -0.26
IFT20-213ENST00000583796 POLKQ9UBT6 870 aa13.45□□□□□ -0.26
IFT20-213ENST00000583796 NCKAP5LQ9HCH0 1330 aa13.45□□□□□ -0.26
IFT20-213ENST00000583796 DCCP43146 1447 aa13.44□□□□□ -0.26
IFT20-213ENST00000583796 E9PSI1 815 aa13.44□□□□□ -0.26
IFT20-213ENST00000583796 U2AF1L5P0DN76 240 aaPredicted RBP13.44□□□□□ -0.26
IFT20-213ENST00000583796 U2AF1Q01081 240 aaKnown RBP eCLIP13.44□□□□□ -0.263e-7■■■■■ 27.9
IFT20-213ENST00000583796 KIF24Q5T7B8 1368 aa13.43□□□□□ -0.26
IFT20-213ENST00000583796 NGDNQ8NEJ9 315 aaKnown RBP13.43□□□□□ -0.26
IFT20-213ENST00000583796 RCAN3Q9UKA8 241 aa13.43□□□□□ -0.26
IFT20-213ENST00000583796 CCDC146Q8IYE0 955 aa13.42□□□□□ -0.26
IFT20-213ENST00000583796 TRMT2AQ8IZ69 625 aaKnown RBP13.42□□□□□ -0.26
IFT20-213ENST00000583796 PIK3C2AO00443 1686 aa13.42□□□□□ -0.26
IFT20-213ENST00000583796 KIF1AQ12756 1690 aa13.42□□□□□ -0.26
IFT20-213ENST00000583796 FCHSD2O94868 740 aa13.42□□□□□ -0.26
IFT20-213ENST00000583796 SLFN5Q08AF3 891 aa13.42□□□□□ -0.26
IFT20-213ENST00000583796 SALL2Q9Y467 1007 aaPredicted RBP13.42□□□□□ -0.26
IFT20-213ENST00000583796 WDR63Q8IWG1 891 aa13.41□□□□□ -0.26
IFT20-213ENST00000583796 TCP11L2Q8N4U5 519 aa13.41□□□□□ -0.26
IFT20-213ENST00000583796 LMTK3Q96Q04 1460 aa13.4□□□□□ -0.26
IFT20-213ENST00000583796 MAPK8IP3Q9UPT6 1336 aa13.4□□□□□ -0.26
IFT20-213ENST00000583796 ZBTB22O15209 634 aa13.4□□□□□ -0.26
IFT20-213ENST00000583796 DUSP27Q5VZP5 1158 aa13.4□□□□□ -0.26
IFT20-213ENST00000583796 WWC1Q8IX03 1113 aa13.4□□□□□ -0.26
IFT20-213ENST00000583796 CDCA7LQ96GN5 454 aa13.4□□□□□ -0.26
IFT20-213ENST00000583796 PLEKHF1Q96S99 279 aa13.4□□□□□ -0.26
IFT20-213ENST00000583796 NUTM2FA1L443 756 aa13.39□□□□□ -0.27
IFT20-213ENST00000583796 U2SURPO15042 1029 aaKnown RBP13.39□□□□□ -0.27
IFT20-213ENST00000583796 NEFMP07197 916 aa13.39□□□□□ -0.27
IFT20-213ENST00000583796 RBM42Q9BTD8 480 aaKnown RBP13.39□□□□□ -0.27
IFT20-213ENST00000583796 PHF8Q9UPP1 1060 aa13.39□□□□□ -0.27
IFT20-213ENST00000583796 PMFBP1Q8TBY8 1022 aa13.38□□□□□ -0.27
IFT20-213ENST00000583796 RRP1P56182 461 aaKnown RBP13.37□□□□□ -0.27
IFT20-213ENST00000583796 C19orf44Q9H6X5 657 aa13.37□□□□□ -0.27
IFT20-213ENST00000583796 PPP4R2Q9NY27 417 aa13.37□□□□□ -0.27
IFT20-213ENST00000583796 SBNO1A3KN83 1393 aa13.37□□□□□ -0.27
IFT20-213ENST00000583796 IL16Q14005 1332 aa13.37□□□□□ -0.27
IFT20-213ENST00000583796 MARF1Q9Y4F3 1742 aaKnown RBP13.37□□□□□ -0.27
IFT20-213ENST00000583796 IL13P35225 146 aa13.36□□□□□ -0.27
IFT20-213ENST00000583796 EMILIN1Q9Y6C2 1016 aa13.36□□□□□ -0.27
IFT20-213ENST00000583796 FLT4P35916 1363 aa13.36□□□□□ -0.27
IFT20-213ENST00000583796 MST1RQ04912 1400 aa13.36□□□□□ -0.27
IFT20-213ENST00000583796 C14orf37Q86TY3 774 aa13.36□□□□□ -0.27
IFT20-213ENST00000583796 PROSER2Q86WR7 435 aaPredicted RBP13.36□□□□□ -0.27
IFT20-213ENST00000583796 ATF5Q9Y2D1 282 aaPredicted RBP13.36□□□□□ -0.27
IFT20-213ENST00000583796 RTL1A6NKG5 1358 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms