RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 OVOS2A0A0J9YW53 1432 aa7.34□□□□□ -1.23
CRLF3-204ENST00000583527 OVOS2Q6IE36 1432 aa7.34□□□□□ -1.23
CRLF3-204ENST00000583527 ANKARQ7Z5J8 1434 aa7.34□□□□□ -1.23
CRLF3-204ENST00000583527 PIK3R4Q99570 1358 aa7.33□□□□□ -1.24
CRLF3-204ENST00000583527 RNF123Q5XPI4 1314 aa7.33□□□□□ -1.24
CRLF3-204ENST00000583527 RGPD1P0DJD0 1748 aa7.33□□□□□ -1.24
CRLF3-204ENST00000583527 HDGFP51858 240 aaKnown RBP7.33□□□□□ -1.24
CRLF3-204ENST00000583527 IRX6P78412 446 aaPredicted RBP7.33□□□□□ -1.24
CRLF3-204ENST00000583527 WAPLQ7Z5K2 1190 aa7.33□□□□□ -1.24
CRLF3-204ENST00000583527 CDK19Q9BWU1 502 aa7.33□□□□□ -1.24
CRLF3-204ENST00000583527 TERF2IPQ9NYB0 399 aa7.33□□□□□ -1.24
CRLF3-204ENST00000583527 ZNF521Q96K83 1311 aa7.32□□□□□ -1.24
CRLF3-204ENST00000583527 PRR36Q9H6K5 1346 aa7.32□□□□□ -1.24
CRLF3-204ENST00000583527 PDE3BQ13370 1112 aa7.32□□□□□ -1.24
CRLF3-204ENST00000583527 HDGFL2Q7Z4V5 671 aaPredicted RBP7.32□□□□□ -1.24
CRLF3-204ENST00000583527 DNAJC5Q9H3Z4 198 aa7.32□□□□□ -1.24
CRLF3-204ENST00000583527 EID1Q9Y6B2 187 aa7.32□□□□□ -1.24
CRLF3-204ENST00000583527 USP6P35125 1406 aa7.32□□□□□ -1.24
CRLF3-204ENST00000583527 KIF1AQ12756 1690 aa7.32□□□□□ -1.24
CRLF3-204ENST00000583527 DLG5Q8TDM6 1919 aa7.31□□□□□ -1.24
CRLF3-204ENST00000583527 WASLO00401 505 aaPredicted RBP7.31□□□□□ -1.24
CRLF3-204ENST00000583527 NPHP4O75161 1426 aaPredicted RBP7.31□□□□□ -1.24
CRLF3-204ENST00000583527 TNNT2P45379 298 aaPredicted RBP7.31□□□□□ -1.24
CRLF3-204ENST00000583527 TXNDC2Q86VQ3 553 aa7.31□□□□□ -1.24
CRLF3-204ENST00000583527 CCDC146Q8IYE0 955 aa7.31□□□□□ -1.24
CRLF3-204ENST00000583527 PELP1Q8IZL8 1130 aaKnown RBP7.31□□□□□ -1.24
CRLF3-204ENST00000583527 SIRT1Q96EB6 747 aa7.31□□□□□ -1.24
CRLF3-204ENST00000583527 ADGRL3Q9HAR2 1447 aa7.31□□□□□ -1.24
CRLF3-204ENST00000583527 ADAMTS8Q9UP79 889 aa7.31□□□□□ -1.24
CRLF3-204ENST00000583527 LTN1O94822 1766 aa7.31□□□□□ -1.24
CRLF3-204ENST00000583527 CFAP53Q96M91 514 aa7.3□□□□□ -1.24
CRLF3-204ENST00000583527 GGNBP2Q9H3C7 697 aa7.3□□□□□ -1.24
CRLF3-204ENST00000583527 STRCP1A6NGW2 1772 aa7.29□□□□□ -1.24
CRLF3-204ENST00000583527 RRP1P56182 461 aaKnown RBP7.29□□□□□ -1.24
CRLF3-204ENST00000583527 SLC26A8Q96RN1 970 aa7.29□□□□□ -1.24
CRLF3-204ENST00000583527 CABP1Q9NZU7 370 aa7.29□□□□□ -1.24
CRLF3-204ENST00000583527 SALL2Q9Y467 1007 aaPredicted RBP7.29□□□□□ -1.24
CRLF3-204ENST00000583527 TRPM3Q9HCF6 1732 aaPredicted RBP7.29□□□□□ -1.24
CRLF3-204ENST00000583527 SSH2Q76I76 1423 aa7.28□□□□□ -1.24
CRLF3-204ENST00000583527 LRRC37A3O60309 1634 aa7.28□□□□□ -1.24
CRLF3-204ENST00000583527 PHRF1Q9P1Y6 1649 aaKnown RBP7.28□□□□□ -1.24
CRLF3-204ENST00000583527 ERICH6BQ5W0A0 696 aa7.28□□□□□ -1.24
CRLF3-204ENST00000583527 THEMISQ8N1K5 641 aaPredicted RBP7.28□□□□□ -1.24
CRLF3-204ENST00000583527 PIP4P2Q8N4L2 257 aa7.28□□□□□ -1.24
CRLF3-204ENST00000583527 NUDT16Q96DE0 195 aaKnown RBP7.28□□□□□ -1.24
CRLF3-204ENST00000583527 CDCA7LQ96GN5 454 aa7.28□□□□□ -1.24
CRLF3-204ENST00000583527 AATKQ6ZMQ8 1374 aa7.28□□□□□ -1.24
CRLF3-204ENST00000583527 PNPLA6Q8IY17 1366 aa7.28□□□□□ -1.24
CRLF3-204ENST00000583527 HAX1O00165 279 aa7.27□□□□□ -1.25
CRLF3-204ENST00000583527 FYB1O15117 783 aa7.27□□□□□ -1.25
CRLF3-204ENST00000583527 MTHFSP49914 203 aa7.27□□□□□ -1.25
CRLF3-204ENST00000583527 RCAN3Q9UKA8 241 aa7.27□□□□□ -1.25
CRLF3-204ENST00000583527 TBX22Q9Y458 520 aa7.27□□□□□ -1.25
CRLF3-204ENST00000583527 NCKAP5LQ9HCH0 1330 aa7.27□□□□□ -1.25
CRLF3-204ENST00000583527 APAF1O14727 1248 aa7.26□□□□□ -1.25
CRLF3-204ENST00000583527 NME9Q86XW9 330 aa7.26□□□□□ -1.25
CRLF3-204ENST00000583527 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.26□□□□□ -1.25
CRLF3-204ENST00000583527 AMOTL2Q9Y2J4 779 aa7.26□□□□□ -1.25
CRLF3-204ENST00000583527 CCDC61Q9Y6R9 512 aa7.26□□□□□ -1.25
CRLF3-204ENST00000583527 NFAT5O94916 1531 aa7.26□□□□□ -1.25
CRLF3-204ENST00000583527 XIRP1Q702N8 1843 aaKnown RBP7.25□□□□□ -1.25
CRLF3-204ENST00000583527 KCNA6P17658 529 aa7.25□□□□□ -1.25
CRLF3-204ENST00000583527 EVX2Q03828 476 aa7.25□□□□□ -1.25
CRLF3-204ENST00000583527 DUSP27Q5VZP5 1158 aa7.25□□□□□ -1.25
CRLF3-204ENST00000583527 NGEFQ8N5V2 710 aa7.25□□□□□ -1.25
CRLF3-204ENST00000583527 PPP4R2Q9NY27 417 aa7.25□□□□□ -1.25
CRLF3-204ENST00000583527 VIRMAQ69YN4 1812 aaKnown RBP7.24□□□□□ -1.25
CRLF3-204ENST00000583527 USP31Q70CQ4 1352 aa7.24□□□□□ -1.25
CRLF3-204ENST00000583527 GOLGA2Q08379 1002 aa7.24□□□□□ -1.25
CRLF3-204ENST00000583527 POLA2Q14181 598 aa7.24□□□□□ -1.25
CRLF3-204ENST00000583527 ALS2Q96Q42 1657 aa7.24□□□□□ -1.25
CRLF3-204ENST00000583527 CAMTA1Q9Y6Y1 1673 aa7.24□□□□□ -1.25
CRLF3-204ENST00000583527 TTC21BQ7Z4L5 1316 aa7.24□□□□□ -1.25
CRLF3-204ENST00000583527 CRYBG1Q9Y4K1 1723 aa7.24□□□□□ -1.25
CRLF3-204ENST00000583527 SLIT3O75094 1523 aa7.23□□□□□ -1.25
CRLF3-204ENST00000583527 FAM208AQ9UK61 1670 aaKnown RBP7.23□□□□□ -1.25
CRLF3-204ENST00000583527 U2AF1L5P0DN76 240 aaPredicted RBP7.23□□□□□ -1.25
CRLF3-204ENST00000583527 U2AF1Q01081 240 aaKnown RBP eCLIP7.23□□□□□ -1.25
CRLF3-204ENST00000583527 RUNDC1Q96C34 613 aa7.23□□□□□ -1.25
CRLF3-204ENST00000583527 ACEP12821 1306 aa7.23□□□□□ -1.25
CRLF3-204ENST00000583527 MAPK8IP3Q9UPT6 1336 aa7.23□□□□□ -1.25
CRLF3-204ENST00000583527 LMTK3Q96Q04 1460 aa7.23□□□□□ -1.25
CRLF3-204ENST00000583527 STRCQ7RTU9 1775 aa7.23□□□□□ -1.25
CRLF3-204ENST00000583527 ABCA3Q99758 1704 aa7.22□□□□□ -1.25
CRLF3-204ENST00000583527 PLEKHG3A1L390 1219 aa7.22□□□□□ -1.25
CRLF3-204ENST00000583527 E9PSI1 815 aa7.22□□□□□ -1.25
CRLF3-204ENST00000583527 U2SURPO15042 1029 aaKnown RBP7.22□□□□□ -1.25
CRLF3-204ENST00000583527 SLFN5Q08AF3 891 aa7.22□□□□□ -1.25
CRLF3-204ENST00000583527 B4GALNT3Q6L9W6 998 aa7.22□□□□□ -1.25
CRLF3-204ENST00000583527 ANKLE2Q86XL3 938 aa7.22□□□□□ -1.25
CRLF3-204ENST00000583527 COG3Q96JB2 828 aa7.22□□□□□ -1.25
CRLF3-204ENST00000583527 ZRANB1Q9UGI0 708 aa7.22□□□□□ -1.25
CRLF3-204ENST00000583527 RRP7AQ9Y3A4 280 aaKnown RBP7.22□□□□□ -1.25
CRLF3-204ENST00000583527 EMILIN1Q9Y6C2 1016 aa7.22□□□□□ -1.25
CRLF3-204ENST00000583527 TTC21AQ8NDW8 1320 aa7.22□□□□□ -1.25
CRLF3-204ENST00000583527 ARHGEF10O15013 1369 aa7.21□□□□□ -1.25
CRLF3-204ENST00000583527 DCCP43146 1447 aa7.21□□□□□ -1.25
CRLF3-204ENST00000583527 NUTM2FA1L443 756 aa7.21□□□□□ -1.26
CRLF3-204ENST00000583527 DIAPH1O60610 1272 aaKnown RBP7.21□□□□□ -1.26
CRLF3-204ENST00000583527 CCDC27Q2M243 656 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms