RNA–Protein interactions for RNA: ENST00000583340.1

SUPT6H-208, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-208ENST00000583340 RXRBP28702 533 aa11.98□□□□□ -0.49
SUPT6H-208ENST00000583340 CABP1Q9NZU7 370 aa11.98□□□□□ -0.49
SUPT6H-208ENST00000583340 USP21Q9UK80 565 aa11.98□□□□□ -0.49
SUPT6H-208ENST00000583340 TRPC5Q9UL62 973 aaPredicted RBP11.98□□□□□ -0.49
SUPT6H-208ENST00000583340 TRPM3Q9HCF6 1732 aaPredicted RBP11.97□□□□□ -0.49
SUPT6H-208ENST00000583340 NINLQ9Y2I6 1382 aa11.97□□□□□ -0.49
SUPT6H-208ENST00000583340 ST20-MTHFSA0A0A6YYL1 179 aa11.97□□□□□ -0.49
SUPT6H-208ENST00000583340 TMF1P82094 1093 aa11.97□□□□□ -0.49
SUPT6H-208ENST00000583340 POTEAQ6S8J7 498 aa11.97□□□□□ -0.49
SUPT6H-208ENST00000583340 FNBP4Q8N3X1 1017 aaPredicted RBP11.97□□□□□ -0.49
SUPT6H-208ENST00000583340 ABTB2Q8N961 1025 aa11.97□□□□□ -0.49
SUPT6H-208ENST00000583340 HDGFL2Q7Z4V5 671 aaPredicted RBP11.96□□□□□ -0.49
SUPT6H-208ENST00000583340 NLRP13Q86W25 1043 aa11.96□□□□□ -0.49
SUPT6H-208ENST00000583340 QTRT2Q9H974 415 aaKnown RBP11.96□□□□□ -0.49
SUPT6H-208ENST00000583340 TERF2IPQ9NYB0 399 aa11.96□□□□□ -0.49
SUPT6H-208ENST00000583340 ALS2Q96Q42 1657 aa11.96□□□□□ -0.5
SUPT6H-208ENST00000583340 USP6P35125 1406 aa11.95□□□□□ -0.5
SUPT6H-208ENST00000583340 MARF1Q9Y4F3 1742 aaKnown RBP11.95□□□□□ -0.5
SUPT6H-208ENST00000583340 PLEKHG5O94827 1062 aa11.95□□□□□ -0.5
SUPT6H-208ENST00000583340 RBM6P78332 1123 aaKnown RBP11.95□□□□□ -0.5
SUPT6H-208ENST00000583340 TMC1Q8TDI8 760 aa11.95□□□□□ -0.5
SUPT6H-208ENST00000583340 TTC21AQ8NDW8 1320 aa11.94□□□□□ -0.5
SUPT6H-208ENST00000583340 CABLES1Q8TDN4 633 aa11.94□□□□□ -0.5
SUPT6H-208ENST00000583340 CDK12Q9NYV4 1490 aaPredicted RBP11.94□□□□□ -0.5
SUPT6H-208ENST00000583340 KTN1Q86UP2 1357 aaKnown RBP11.93□□□□□ -0.5
SUPT6H-208ENST00000583340 UNC5CLQ8IV45 518 aa11.93□□□□□ -0.5
SUPT6H-208ENST00000583340 TESK2Q96S53 571 aa11.93□□□□□ -0.5
SUPT6H-208ENST00000583340 PRDM11Q9NQV5 511 aa11.93□□□□□ -0.5
SUPT6H-208ENST00000583340 ABCA3Q99758 1704 aa11.91□□□□□ -0.5
SUPT6H-208ENST00000583340 SLIT2O94813 1529 aa11.91□□□□□ -0.5
SUPT6H-208ENST00000583340 NLRP6P59044 892 aa11.91□□□□□ -0.5
SUPT6H-208ENST00000583340 EIF4G2P78344 907 aaKnown RBP eCLIP11.91□□□□□ -0.5
SUPT6H-208ENST00000583340 NUTM2GQ5VZR2 741 aa11.91□□□□□ -0.5
SUPT6H-208ENST00000583340 ATRNO75882 1429 aa11.91□□□□□ -0.5
SUPT6H-208ENST00000583340 USP19O94966 1318 aa11.9□□□□□ -0.5
SUPT6H-208ENST00000583340 TTC21BQ7Z4L5 1316 aa11.9□□□□□ -0.5
SUPT6H-208ENST00000583340 CPSF1Q10570 1443 aaKnown RBP11.9□□□□□ -0.5
SUPT6H-208ENST00000583340 KCNH5Q8NCM2 988 aa11.9□□□□□ -0.5
SUPT6H-208ENST00000583340 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.9□□□□□ -0.5
SUPT6H-208ENST00000583340 NWD2Q9ULI1 1742 aa11.9□□□□□ -0.5
SUPT6H-208ENST00000583340 COL14A1Q05707 1796 aaKnown RBP11.9□□□□□ -0.51
SUPT6H-208ENST00000583340 BCL9LQ86UU0 1499 aa11.89□□□□□ -0.51
SUPT6H-208ENST00000583340 EDC4Q6P2E9 1401 aaKnown RBP11.89□□□□□ -0.51
SUPT6H-208ENST00000583340 CCDC9Q9Y3X0 531 aaKnown RBP11.89□□□□□ -0.51
SUPT6H-208ENST00000583340 AKAP12Q02952 1782 aa11.89□□□□□ -0.51
SUPT6H-208ENST00000583340 FAM83GA6ND36 823 aa11.88□□□□□ -0.51
SUPT6H-208ENST00000583340 GCP02774 474 aa11.88□□□□□ -0.51
SUPT6H-208ENST00000583340 VPS72Q15906 364 aa11.88□□□□□ -0.51
SUPT6H-208ENST00000583340 GJD4Q96KN9 370 aaPredicted RBP11.88□□□□□ -0.51
SUPT6H-208ENST00000583340 SLC12A5Q9H2X9 1139 aa11.88□□□□□ -0.51
SUPT6H-208ENST00000583340 BTG4Q9NY30 223 aa11.88□□□□□ -0.51
SUPT6H-208ENST00000583340 CPDO75976 1380 aa11.88□□□□□ -0.51
SUPT6H-208ENST00000583340 KIAA0232Q92628 1395 aa11.88□□□□□ -0.51
SUPT6H-208ENST00000583340 PLCH1Q4KWH8 1693 aa11.87□□□□□ -0.51
SUPT6H-208ENST00000583340 SSH2Q76I76 1423 aa11.87□□□□□ -0.51
SUPT6H-208ENST00000583340 PHRF1Q9P1Y6 1649 aaKnown RBP11.87□□□□□ -0.51
SUPT6H-208ENST00000583340 ZC3H6P61129 1189 aaKnown RBP11.87□□□□□ -0.51
SUPT6H-208ENST00000583340 ANKRD36BQ8N2N9 1353 aa11.87□□□□□ -0.51
SUPT6H-208ENST00000583340 MON2Q7Z3U7 1717 aa11.86□□□□□ -0.51
SUPT6H-208ENST00000583340 CRYBG1Q9Y4K1 1723 aa11.86□□□□□ -0.51
SUPT6H-208ENST00000583340 EVA1CP58658 441 aa11.86□□□□□ -0.51
SUPT6H-208ENST00000583340 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.86□□□□□ -0.51
SUPT6H-208ENST00000583340 A0A1W2PP64 1363 aa11.86□□□□□ -0.51
SUPT6H-208ENST00000583340 NRKQ7Z2Y5 1582 aa11.85□□□□□ -0.51
SUPT6H-208ENST00000583340 PIK3C2AO00443 1686 aa11.84□□□□□ -0.51
SUPT6H-208ENST00000583340 USP31Q70CQ4 1352 aa11.84□□□□□ -0.51
SUPT6H-208ENST00000583340 ZNF316A6NFI3 1004 aaPredicted RBP11.84□□□□□ -0.51
SUPT6H-208ENST00000583340 SLIT3O75094 1523 aa11.84□□□□□ -0.51
SUPT6H-208ENST00000583340 RGS12O14924 1447 aa11.84□□□□□ -0.51
SUPT6H-208ENST00000583340 CD163L1Q9NR16 1453 aa11.83□□□□□ -0.52
SUPT6H-208ENST00000583340 A0A0G2JS52 829 aa11.83□□□□□ -0.52
SUPT6H-208ENST00000583340 ZBTB7CA1YPR0 619 aa11.83□□□□□ -0.52
SUPT6H-208ENST00000583340 HSPA5P11021 654 aaKnown RBP11.83□□□□□ -0.52
SUPT6H-208ENST00000583340 MYT1Q01538 1121 aa11.83□□□□□ -0.52
SUPT6H-208ENST00000583340 CHRNA2Q15822 529 aa11.83□□□□□ -0.52
SUPT6H-208ENST00000583340 COG3Q96JB2 828 aa11.83□□□□□ -0.52
SUPT6H-208ENST00000583340 AATKQ6ZMQ8 1374 aa11.82□□□□□ -0.52
SUPT6H-208ENST00000583340 POLR3GLQ9BT43 218 aa11.82□□□□□ -0.52
SUPT6H-208ENST00000583340 STRN4Q9NRL3 753 aa11.82□□□□□ -0.52
SUPT6H-208ENST00000583340 NRAPQ86VF7 1730 aa11.81□□□□□ -0.52
SUPT6H-208ENST00000583340 NME9Q86XW9 330 aa11.81□□□□□ -0.52
SUPT6H-208ENST00000583340 SPATA31A5Q5VU36 1347 aa11.81□□□□□ -0.52
SUPT6H-208ENST00000583340 SPATA31A7Q8IWB4 1347 aa11.81□□□□□ -0.52
SUPT6H-208ENST00000583340 ABCC6O95255 1503 aa11.81□□□□□ -0.52
SUPT6H-208ENST00000583340 SOX12O15370 315 aa11.8□□□□□ -0.52
SUPT6H-208ENST00000583340 USP54Q70EL1 1684 aa11.8□□□□□ -0.52
SUPT6H-208ENST00000583340 ARHGEF25Q86VW2 580 aa11.79□□□□□ -0.52
SUPT6H-208ENST00000583340 SEPT12Q8IYM1 358 aa11.79□□□□□ -0.52
SUPT6H-208ENST00000583340 THRAP3Q9Y2W1 955 aaKnown RBP11.79□□□□□ -0.52
SUPT6H-208ENST00000583340 GLI3P10071 1580 aa11.79□□□□□ -0.52
SUPT6H-208ENST00000583340 ONECUT3O60422 494 aaPredicted RBP11.78□□□□□ -0.52
SUPT6H-208ENST00000583340 CSB-PGBD3P0DP91 1061 aa11.78□□□□□ -0.52
SUPT6H-208ENST00000583340 FAM98CQ17RN3 349 aaKnown RBP11.78□□□□□ -0.52
SUPT6H-208ENST00000583340 TCP11L2Q8N4U5 519 aa11.78□□□□□ -0.52
SUPT6H-208ENST00000583340 CGNL1Q0VF96 1302 aa11.78□□□□□ -0.52
SUPT6H-208ENST00000583340 SPATA31A1Q5TZJ5 1347 aa11.78□□□□□ -0.52
SUPT6H-208ENST00000583340 LMO7Q8WWI1 1683 aa11.78□□□□□ -0.52
SUPT6H-208ENST00000583340 OVOS2A0A0J9YW53 1432 aa11.77□□□□□ -0.52
SUPT6H-208ENST00000583340 OVOS2Q6IE36 1432 aa11.77□□□□□ -0.52
SUPT6H-208ENST00000583340 COL5A2P05997 1499 aaPredicted RBP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms