RNA–Protein interactions for RNA: ENST00000583117.1

LINC00200-202, long intergenic non-protein coding RNA 200, humanhuman

TSL 3

Gene LINC00200, Length 632 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00200-202ENST00000583117 AKAP12Q02952 1782 aa25.22■■□□□ 1.63
LINC00200-202ENST00000583117 CPSF1Q10570 1443 aaKnown RBP25.21■■□□□ 1.63
LINC00200-202ENST00000583117 HSPA5P11021 654 aaKnown RBP25.21■■□□□ 1.63
LINC00200-202ENST00000583117 HAP1P54257 671 aaPredicted RBP25.2■■□□□ 1.62
LINC00200-202ENST00000583117 ADAMTS2O95450 1211 aa25.19■■□□□ 1.62
LINC00200-202ENST00000583117 HDGFL2Q7Z4V5 671 aaPredicted RBP25.19■■□□□ 1.62
LINC00200-202ENST00000583117 TERF2IPQ9NYB0 399 aa25.19■■□□□ 1.62
LINC00200-202ENST00000583117 KTN1Q86UP2 1357 aaKnown RBP25.18■■□□□ 1.62
LINC00200-202ENST00000583117 SLC12A5Q9H2X9 1139 aa25.18■■□□□ 1.62
LINC00200-202ENST00000583117 MARF1Q9Y4F3 1742 aaKnown RBP25.17■■□□□ 1.62
LINC00200-202ENST00000583117 ABTB2Q8N961 1025 aa25.17■■□□□ 1.62
LINC00200-202ENST00000583117 C8orf37Q96NL8 207 aa25.17■■□□□ 1.62
LINC00200-202ENST00000583117 SSH2Q76I76 1423 aa25.17■■□□□ 1.62
LINC00200-202ENST00000583117 ABCA3Q99758 1704 aa25.17■■□□□ 1.62
LINC00200-202ENST00000583117 MON2Q7Z3U7 1717 aa25.16■■□□□ 1.62
LINC00200-202ENST00000583117 TTC21AQ8NDW8 1320 aa25.15■■□□□ 1.62
LINC00200-202ENST00000583117 ZNF772Q68DY9 489 aaPredicted RBP25.15■■□□□ 1.62
LINC00200-202ENST00000583117 CABLES1Q8TDN4 633 aa25.15■■□□□ 1.62
LINC00200-202ENST00000583117 NGLY1Q96IV0 654 aa25.15■■□□□ 1.62
LINC00200-202ENST00000583117 CD163L1Q9NR16 1453 aa25.15■■□□□ 1.62
LINC00200-202ENST00000583117 NLRP13Q86W25 1043 aa25.14■■□□□ 1.62
LINC00200-202ENST00000583117 RGS17Q9UGC6 210 aaPredicted RBP25.14■■□□□ 1.62
LINC00200-202ENST00000583117 TTC21BQ7Z4L5 1316 aa25.13■■□□□ 1.61
LINC00200-202ENST00000583117 NRKQ7Z2Y5 1582 aa25.13■■□□□ 1.61
LINC00200-202ENST00000583117 AFF2P51816 1311 aa25.12■■□□□ 1.61
LINC00200-202ENST00000583117 CRYBG1Q9Y4K1 1723 aa25.12■■□□□ 1.61
LINC00200-202ENST00000583117 A0A1W2PP64 1363 aa25.11■■□□□ 1.61
LINC00200-202ENST00000583117 PLEKHG5O94827 1062 aa25.11■■□□□ 1.61
LINC00200-202ENST00000583117 EDC4Q6P2E9 1401 aaKnown RBP25.11■■□□□ 1.61
LINC00200-202ENST00000583117 NUTM2GQ5VZR2 741 aa25.1■■□□□ 1.61
LINC00200-202ENST00000583117 ANKRD36BQ8N2N9 1353 aa25.09■■□□□ 1.61
LINC00200-202ENST00000583117 NLRP6P59044 892 aa25.09■■□□□ 1.61
LINC00200-202ENST00000583117 FNBP4Q8N3X1 1017 aaPredicted RBP25.09■■□□□ 1.61
LINC00200-202ENST00000583117 USP19O94966 1318 aa25.09■■□□□ 1.61
LINC00200-202ENST00000583117 PHRF1Q9P1Y6 1649 aaKnown RBP25.08■■□□□ 1.61
LINC00200-202ENST00000583117 PIK3C2AO00443 1686 aa25.08■■□□□ 1.61
LINC00200-202ENST00000583117 USP21Q9UK80 565 aa25.05■■□□□ 1.6
LINC00200-202ENST00000583117 MYOM1P52179 1685 aa25.04■■□□□ 1.6
LINC00200-202ENST00000583117 POTEAQ6S8J7 498 aa25.04■■□□□ 1.6
LINC00200-202ENST00000583117 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.04■■□□□ 1.6
LINC00200-202ENST00000583117 SLIT2O94813 1529 aa25.03■■□□□ 1.6
LINC00200-202ENST00000583117 GCP02774 474 aa25.02■■□□□ 1.6
LINC00200-202ENST00000583117 POLR3GLQ9BT43 218 aa25.02■■□□□ 1.6
LINC00200-202ENST00000583117 COL14A1Q05707 1796 aaKnown RBP25.02■■□□□ 1.6
LINC00200-202ENST00000583117 USP31Q70CQ4 1352 aa25.02■■□□□ 1.6
LINC00200-202ENST00000583117 SLIT3O75094 1523 aa25.02■■□□□ 1.6
LINC00200-202ENST00000583117 NWD2Q9ULI1 1742 aa25.01■■□□□ 1.59
LINC00200-202ENST00000583117 PRDM11Q9NQV5 511 aa25.01■■□□□ 1.59
LINC00200-202ENST00000583117 FAM83GA6ND36 823 aa25■■□□□ 1.59
LINC00200-202ENST00000583117 KCNH5Q8NCM2 988 aa25■■□□□ 1.59
LINC00200-202ENST00000583117 QTRT2Q9H974 415 aaKnown RBP25■■□□□ 1.59
LINC00200-202ENST00000583117 CPDO75976 1380 aa25■■□□□ 1.59
LINC00200-202ENST00000583117 BCL9LQ86UU0 1499 aa25■■□□□ 1.59
LINC00200-202ENST00000583117 PLCH1Q4KWH8 1693 aa25■■□□□ 1.59
LINC00200-202ENST00000583117 USP54Q70EL1 1684 aa25■■□□□ 1.59
LINC00200-202ENST00000583117 TNKS1BP1Q9C0C2 1729 aaKnown RBP25■■□□□ 1.59
LINC00200-202ENST00000583117 KIAA0232Q92628 1395 aa24.99■■□□□ 1.59
LINC00200-202ENST00000583117 TRPC5Q9UL62 973 aaPredicted RBP24.99■■□□□ 1.59
LINC00200-202ENST00000583117 NME9Q86XW9 330 aa24.98■■□□□ 1.59
LINC00200-202ENST00000583117 UNC5CLQ8IV45 518 aa24.98■■□□□ 1.59
LINC00200-202ENST00000583117 ZC3H6P61129 1189 aaKnown RBP24.97■■□□□ 1.59
LINC00200-202ENST00000583117 ILDR2Q71H61 639 aa24.97■■□□□ 1.59
LINC00200-202ENST00000583117 RXRBP28702 533 aa24.96■■□□□ 1.59
LINC00200-202ENST00000583117 ZEB1P37275 1124 aaPredicted RBP24.96■■□□□ 1.59
LINC00200-202ENST00000583117 ATRNO75882 1429 aa24.95■■□□□ 1.59
LINC00200-202ENST00000583117 C11orf95C9JLR9 678 aaPredicted RBP24.95■■□□□ 1.58
LINC00200-202ENST00000583117 RBM6P78332 1123 aaKnown RBP24.94■■□□□ 1.58
LINC00200-202ENST00000583117 BTG4Q9NY30 223 aa24.94■■□□□ 1.58
LINC00200-202ENST00000583117 OVOS2A0A0J9YW53 1432 aa24.93■■□□□ 1.58
LINC00200-202ENST00000583117 OVOS2Q6IE36 1432 aa24.93■■□□□ 1.58
LINC00200-202ENST00000583117 KIF7Q2M1P5 1343 aa24.92■■□□□ 1.58
LINC00200-202ENST00000583117 COG3Q96JB2 828 aa24.92■■□□□ 1.58
LINC00200-202ENST00000583117 CHRNA2Q15822 529 aa24.91■■□□□ 1.58
LINC00200-202ENST00000583117 CARD14Q9BXL6 1004 aa24.91■■□□□ 1.58
LINC00200-202ENST00000583117 ZRANB1Q9UGI0 708 aa24.91■■□□□ 1.58
LINC00200-202ENST00000583117 NSD3Q9BZ95 1437 aa24.91■■□□□ 1.58
LINC00200-202ENST00000583117 CDK12Q9NYV4 1490 aaPredicted RBP24.9■■□□□ 1.58
LINC00200-202ENST00000583117 NRAPQ86VF7 1730 aa24.9■■□□□ 1.58
LINC00200-202ENST00000583117 VPS72Q15906 364 aa24.9■■□□□ 1.58
LINC00200-202ENST00000583117 NFAT5O94916 1531 aa24.9■■□□□ 1.58
LINC00200-202ENST00000583117 FYB1O15117 783 aa24.89■■□□□ 1.58
LINC00200-202ENST00000583117 AATKQ6ZMQ8 1374 aa24.89■■□□□ 1.57
LINC00200-202ENST00000583117 ARHGEF25Q86VW2 580 aa24.88■■□□□ 1.57
LINC00200-202ENST00000583117 GJD4Q96KN9 370 aaPredicted RBP24.88■■□□□ 1.57
LINC00200-202ENST00000583117 KIF20BQ96Q89 1820 aa24.88■■□□□ 1.57
LINC00200-202ENST00000583117 LMO7Q8WWI1 1683 aa24.88■■□□□ 1.57
LINC00200-202ENST00000583117 CGNL1Q0VF96 1302 aa24.87■■□□□ 1.57
LINC00200-202ENST00000583117 SOX12O15370 315 aa24.87■■□□□ 1.57
LINC00200-202ENST00000583117 PANK3Q9H999 370 aa24.87■■□□□ 1.57
LINC00200-202ENST00000583117 SOCS7O14512 581 aa24.86■■□□□ 1.57
LINC00200-202ENST00000583117 ABCC6O95255 1503 aa24.86■■□□□ 1.57
LINC00200-202ENST00000583117 CCDC7Q96M83 1385 aa24.85■■□□□ 1.57
LINC00200-202ENST00000583117 ZBTB7CA1YPR0 619 aa24.85■■□□□ 1.57
LINC00200-202ENST00000583117 CCDC9Q9Y3X0 531 aaKnown RBP24.85■■□□□ 1.57
LINC00200-202ENST00000583117 EVA1CP58658 441 aa24.84■■□□□ 1.57
LINC00200-202ENST00000583117 GGNBP2Q9H3C7 697 aa24.84■■□□□ 1.57
LINC00200-202ENST00000583117 CAMTA1Q9Y6Y1 1673 aa24.84■■□□□ 1.57
LINC00200-202ENST00000583117 COL18A1P39060 1754 aa24.82■■□□□ 1.56
LINC00200-202ENST00000583117 WASHC2AQ641Q2 1341 aa24.82■■□□□ 1.56
LINC00200-202ENST00000583117 STRN4Q9NRL3 753 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms