RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 ABCA9Q8IUA7 1624 aa7.23□□□□□ -1.25
RTTN-209ENST00000583043 PLA2R1Q13018 1463 aa7.23□□□□□ -1.25
RTTN-209ENST00000583043 EFCAB6Q5THR3 1501 aa7.23□□□□□ -1.25
RTTN-209ENST00000583043 TRPM1Q7Z4N2 1603 aa7.23□□□□□ -1.25
RTTN-209ENST00000583043 PHF14O94880 888 aa7.23□□□□□ -1.25
RTTN-209ENST00000583043 RUFY2Q8WXA3 655 aa7.23□□□□□ -1.25
RTTN-209ENST00000583043 GGNBP2Q9H3C7 697 aa7.23□□□□□ -1.25
RTTN-209ENST00000583043 SETBP1Q9Y6X0 1596 aa7.23□□□□□ -1.25
RTTN-209ENST00000583043 POLR1AO95602 1720 aaPredicted RBP7.23□□□□□ -1.25
RTTN-209ENST00000583043 OS9Q13438 667 aaPredicted RBP7.23□□□□□ -1.25
RTTN-209ENST00000583043 KIF3AQ9Y496 699 aa7.23□□□□□ -1.25
RTTN-209ENST00000583043 WASLO00401 505 aaPredicted RBP7.22□□□□□ -1.25
RTTN-209ENST00000583043 HDAC1Q13547 482 aaPredicted RBP7.22□□□□□ -1.25
RTTN-209ENST00000583043 LRRIQ1Q96JM4 1722 aa7.22□□□□□ -1.25
RTTN-209ENST00000583043 GOLGA6L3A6NEY3 463 aa7.22□□□□□ -1.25
RTTN-209ENST00000583043 LRRFIP1Q32MZ4 808 aaKnown RBP7.22□□□□□ -1.25
RTTN-209ENST00000583043 SRCIN1Q9C0H9 1055 aa7.22□□□□□ -1.25
RTTN-209ENST00000583043 RRP7AQ9Y3A4 280 aaKnown RBP7.22□□□□□ -1.25
RTTN-209ENST00000583043 RAPGEF3O95398 923 aa7.22□□□□□ -1.25
RTTN-209ENST00000583043 HECW2Q9P2P5 1572 aa7.22□□□□□ -1.25
RTTN-209ENST00000583043 CCDC30Q5VVM6 783 aa7.22□□□□□ -1.25
RTTN-209ENST00000583043 DDX58O95786 925 aaKnown RBP7.22□□□□□ -1.25
RTTN-209ENST00000583043 PRKAR2BP31323 418 aa7.22□□□□□ -1.25
RTTN-209ENST00000583043 KIF24Q5T7B8 1368 aa7.21□□□□□ -1.25
RTTN-209ENST00000583043 EXOSC9Q06265 439 aaKnown RBP7.21□□□□□ -1.25
RTTN-209ENST00000583043 RABEP1Q15276 862 aa7.21□□□□□ -1.25
RTTN-209ENST00000583043 BABAM1Q9NWV8 329 aa7.21□□□□□ -1.25
RTTN-209ENST00000583043 CABP1Q9NZU7 370 aa7.21□□□□□ -1.25
RTTN-209ENST00000583043 TNRQ92752 1358 aa7.21□□□□□ -1.25
RTTN-209ENST00000583043 KIAA1210Q9ULL0 1709 aa7.21□□□□□ -1.25
RTTN-209ENST00000583043 C22orf23Q9BZE7 217 aa7.21□□□□□ -1.26
RTTN-209ENST00000583043 SENP3Q9H4L4 574 aaPredicted RBP7.21□□□□□ -1.26
RTTN-209ENST00000583043 PTPRCP08575 1304 aa7.21□□□□□ -1.26
RTTN-209ENST00000583043 MFAP1P55081 439 aaKnown RBP7.21□□□□□ -1.26
RTTN-209ENST00000583043 TWISTNBQ3B726 338 aaPredicted RBP7.21□□□□□ -1.26
RTTN-209ENST00000583043 YTHDC2Q9H6S0 1430 aaKnown RBP7.2□□□□□ -1.26
RTTN-209ENST00000583043 RIMS2Q9UQ26 1411 aa7.2□□□□□ -1.26
RTTN-209ENST00000583043 CWC22Q9HCG8 908 aaKnown RBP7.2□□□□□ -1.26
RTTN-209ENST00000583043 NPATQ14207 1427 aa7.2□□□□□ -1.26
RTTN-209ENST00000583043 GOLGA6L6A8MZA4 724 aa7.2□□□□□ -1.26
RTTN-209ENST00000583043 PDZRN3Q9UPQ7 1066 aa7.2□□□□□ -1.26
RTTN-209ENST00000583043 TXNDC2Q86VQ3 553 aa7.2□□□□□ -1.26
RTTN-209ENST00000583043 NUDT16Q96DE0 195 aaKnown RBP7.2□□□□□ -1.26
RTTN-209ENST00000583043 PLEKHH1Q9ULM0 1364 aa7.2□□□□□ -1.26
RTTN-209ENST00000583043 C1orf141Q5JVX7 400 aa7.2□□□□□ -1.26
RTTN-209ENST00000583043 ANKRD45Q5TZF3 282 aa7.2□□□□□ -1.26
RTTN-209ENST00000583043 KCNH5Q8NCM2 988 aa7.2□□□□□ -1.26
RTTN-209ENST00000583043 HIP1O00291 1037 aa7.19□□□□□ -1.26
RTTN-209ENST00000583043 NRDCO43847 1150 aa7.19□□□□□ -1.26
RTTN-209ENST00000583043 ERC1Q8IUD2 1116 aa7.19□□□□□ -1.26
RTTN-209ENST00000583043 EDC4Q6P2E9 1401 aaKnown RBP7.19□□□□□ -1.26
RTTN-209ENST00000583043 NUTM2DQ5VT03 806 aaPredicted RBP7.19□□□□□ -1.26
RTTN-209ENST00000583043 PANK1Q8TE04 598 aa7.19□□□□□ -1.26
RTTN-209ENST00000583043 ERC2O15083 957 aa7.19□□□□□ -1.26
RTTN-209ENST00000583043 TEFQ10587 303 aa7.19□□□□□ -1.26
RTTN-209ENST00000583043 MED14O60244 1454 aa7.19□□□□□ -1.26
RTTN-209ENST00000583043 MAP3K4Q9Y6R4 1608 aa7.19□□□□□ -1.26
RTTN-209ENST00000583043 ERVK-7P63135 1459 aa7.18□□□□□ -1.26
RTTN-209ENST00000583043 INO80Q9ULG1 1556 aaPredicted RBP7.18□□□□□ -1.26
RTTN-209ENST00000583043 PLEKHO1Q53GL0 409 aaPredicted RBP7.18□□□□□ -1.26
RTTN-209ENST00000583043 PSME1Q06323 249 aa7.18□□□□□ -1.26
RTTN-209ENST00000583043 TRMT2AQ8IZ69 625 aaKnown RBP7.18□□□□□ -1.26
RTTN-209ENST00000583043 CDC42BPBQ9Y5S2 1711 aa7.18□□□□□ -1.26
RTTN-209ENST00000583043 ATP7BP35670 1465 aa7.18□□□□□ -1.26
RTTN-209ENST00000583043 NEXNQ0ZGT2 675 aa7.18□□□□□ -1.26
RTTN-209ENST00000583043 PPIP5K1Q6PFW1 1433 aa7.18□□□□□ -1.26
RTTN-209ENST00000583043 AATKQ6ZMQ8 1374 aa7.17□□□□□ -1.26
RTTN-209ENST00000583043 TSPYL4Q9UJ04 414 aa7.17□□□□□ -1.26
RTTN-209ENST00000583043 MADDQ8WXG6 1647 aa7.17□□□□□ -1.26
RTTN-209ENST00000583043 BCAR3O75815 825 aa7.17□□□□□ -1.26
RTTN-209ENST00000583043 ZRSR1Q15695 479 aaKnown RBP7.17□□□□□ -1.26
RTTN-209ENST00000583043 SENP3-EIF4A1A0A087X0R7 540 aa7.17□□□□□ -1.26
RTTN-209ENST00000583043 KCNJ4P48050 445 aa7.17□□□□□ -1.26
RTTN-209ENST00000583043 ABCC3O15438 1527 aa7.17□□□□□ -1.26
RTTN-209ENST00000583043 KIF1BO60333 1816 aa7.17□□□□□ -1.26
RTTN-209ENST00000583043 ZNF521Q96K83 1311 aa7.17□□□□□ -1.26
RTTN-209ENST00000583043 ADGRB3O60242 1522 aa7.17□□□□□ -1.26
RTTN-209ENST00000583043 BRPF1P55201 1214 aaPredicted RBP7.17□□□□□ -1.26
RTTN-209ENST00000583043 NOB1Q9ULX3 412 aaKnown RBP7.17□□□□□ -1.26
RTTN-209ENST00000583043 BMP2KLQ5H9B9 411 aa7.16□□□□□ -1.26
RTTN-209ENST00000583043 CHD1LQ86WJ1 897 aa7.16□□□□□ -1.26
RTTN-209ENST00000583043 FAM135BQ49AJ0 1406 aa7.16□□□□□ -1.26
RTTN-209ENST00000583043 ANKLE2Q86XL3 938 aa7.16□□□□□ -1.26
RTTN-209ENST00000583043 SPHKAPQ2M3C7 1700 aa7.16□□□□□ -1.26
RTTN-209ENST00000583043 EPB41L2O43491 1005 aaKnown RBP7.16□□□□□ -1.26
RTTN-209ENST00000583043 GNAI2P04899 355 aa7.16□□□□□ -1.26
RTTN-209ENST00000583043 NFKBIBQ15653 356 aa7.16□□□□□ -1.26
RTTN-209ENST00000583043 AMOTQ4VCS5 1084 aa7.16□□□□□ -1.26
RTTN-209ENST00000583043 RNF20Q5VTR2 975 aa7.16□□□□□ -1.26
RTTN-209ENST00000583043 MRE11P49959 708 aa7.16□□□□□ -1.26
RTTN-209ENST00000583043 RTL1A6NKG5 1358 aa7.16□□□□□ -1.26
RTTN-209ENST00000583043 FYB1O15117 783 aa7.15□□□□□ -1.26
RTTN-209ENST00000583043 RAB11FIP3O75154 756 aa7.15□□□□□ -1.26
RTTN-209ENST00000583043 PAK3O75914 559 aaPredicted RBP7.15□□□□□ -1.26
RTTN-209ENST00000583043 MBD3O95983 291 aa7.15□□□□□ -1.26
RTTN-209ENST00000583043 TBX22Q9Y458 520 aa7.15□□□□□ -1.26
RTTN-209ENST00000583043 RNF17Q9BXT8 1623 aaKnown RBP7.15□□□□□ -1.26
RTTN-209ENST00000583043 A0A0G2JS52 829 aa7.15□□□□□ -1.26
RTTN-209ENST00000583043 NRXN1Q9ULB1 1477 aa7.15□□□□□ -1.26
RTTN-209ENST00000583043 VWDEQ8N2E2 1590 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms