RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 PHF23Q9BUL5 403 aaPredicted RBP13.14□□□□□ -0.31
TOP3A-214ENST00000582981 SHROOM2Q13796 1616 aa13.14□□□□□ -0.31
TOP3A-214ENST00000582981 PDE4CQ08493 712 aa13.14□□□□□ -0.31
TOP3A-214ENST00000582981 MSNP26038 577 aaKnown RBP13.13□□□□□ -0.31
TOP3A-214ENST00000582981 EVC2Q86UK5 1308 aa13.13□□□□□ -0.31
TOP3A-214ENST00000582981 PRAM1Q96QH2 718 aa13.13□□□□□ -0.31
TOP3A-214ENST00000582981 ATAD2Q6PL18 1390 aa13.13□□□□□ -0.31
TOP3A-214ENST00000582981 CD109Q6YHK3 1445 aa13.13□□□□□ -0.31
TOP3A-214ENST00000582981 ANKRD45Q5TZF3 282 aa13.13□□□□□ -0.31
TOP3A-214ENST00000582981 A0A1W2PP64 1363 aa13.12□□□□□ -0.31
TOP3A-214ENST00000582981 NPATQ14207 1427 aa13.12□□□□□ -0.31
TOP3A-214ENST00000582981 CD2BP2O95400 341 aaKnown RBP13.12□□□□□ -0.31
TOP3A-214ENST00000582981 ZNF518AQ6AHZ1 1483 aa13.12□□□□□ -0.31
TOP3A-214ENST00000582981 TET3O43151 1660 aa13.12□□□□□ -0.31
TOP3A-214ENST00000582981 GAS2L3Q86XJ1 694 aa13.12□□□□□ -0.31
TOP3A-214ENST00000582981 HSCBQ8IWL3 235 aa13.12□□□□□ -0.31
TOP3A-214ENST00000582981 TSPYL6Q8N831 410 aa13.12□□□□□ -0.31
TOP3A-214ENST00000582981 STAC3Q96MF2 364 aa13.12□□□□□ -0.31
TOP3A-214ENST00000582981 CHMP5Q9NZZ3 219 aa13.12□□□□□ -0.31
TOP3A-214ENST00000582981 SHPRHQ149N8 1683 aa13.11□□□□□ -0.31
TOP3A-214ENST00000582981 PRKAR2BP31323 418 aa13.11□□□□□ -0.31
TOP3A-214ENST00000582981 IDI1Q13907 227 aa13.11□□□□□ -0.31
TOP3A-214ENST00000582981 ZRANB1Q9UGI0 708 aa13.11□□□□□ -0.31
TOP3A-214ENST00000582981 IQSEC2Q5JU85 1478 aa13.11□□□□□ -0.31
TOP3A-214ENST00000582981 ZBTB7CA1YPR0 619 aa13.11□□□□□ -0.31
TOP3A-214ENST00000582981 RTEL1-TNFRSF6BF6WH68 1400 aa13.11□□□□□ -0.31
TOP3A-214ENST00000582981 FYB1O15117 783 aa13.11□□□□□ -0.31
TOP3A-214ENST00000582981 ANP32BQ92688 251 aaKnown RBP13.11□□□□□ -0.31
TOP3A-214ENST00000582981 DCTN1Q14203 1278 aa13.1□□□□□ -0.31
TOP3A-214ENST00000582981 PHACTR3Q96KR7 559 aa13.1□□□□□ -0.31
TOP3A-214ENST00000582981 CABP1Q9NZU7 370 aa13.1□□□□□ -0.31
TOP3A-214ENST00000582981 DDX19BQ9UMR2 479 aa13.1□□□□□ -0.31
TOP3A-214ENST00000582981 NINLQ9Y2I6 1382 aa13.09□□□□□ -0.31
TOP3A-214ENST00000582981 SOX12O15370 315 aa13.09□□□□□ -0.31
TOP3A-214ENST00000582981 HSP90AB1P08238 724 aaKnown RBP13.09□□□□□ -0.31
TOP3A-214ENST00000582981 PLEKHF1Q96S99 279 aa13.09□□□□□ -0.31
TOP3A-214ENST00000582981 PPRC1Q5VV67 1664 aaKnown RBP13.09□□□□□ -0.31
TOP3A-214ENST00000582981 FAM83GA6ND36 823 aa13.09□□□□□ -0.31
TOP3A-214ENST00000582981 NGEFQ8N5V2 710 aa13.09□□□□□ -0.31
TOP3A-214ENST00000582981 NCKAP5LQ9HCH0 1330 aa13.08□□□□□ -0.32
TOP3A-214ENST00000582981 DDX11L8A8MPP1 907 aa13.08□□□□□ -0.32
TOP3A-214ENST00000582981 FBXO31Q5XUX0 539 aaPredicted RBP13.08□□□□□ -0.32
TOP3A-214ENST00000582981 WAPLQ7Z5K2 1190 aa13.08□□□□□ -0.32
TOP3A-214ENST00000582981 DIAPH1O60610 1272 aaKnown RBP13.08□□□□□ -0.32
TOP3A-214ENST00000582981 MROH1Q8NDA8 1641 aa13.08□□□□□ -0.32
TOP3A-214ENST00000582981 MYOM2P54296 1465 aa13.08□□□□□ -0.32
TOP3A-214ENST00000582981 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.07□□□□□ -0.32
TOP3A-214ENST00000582981 EMILIN1Q9Y6C2 1016 aa13.07□□□□□ -0.32
TOP3A-214ENST00000582981 KIF1BO60333 1816 aa13.07□□□□□ -0.32
TOP3A-214ENST00000582981 NUTM2FA1L443 756 aa13.07□□□□□ -0.32
TOP3A-214ENST00000582981 ASXL2Q76L83 1435 aa13.07□□□□□ -0.32
TOP3A-214ENST00000582981 KRT24Q2M2I5 525 aa13.07□□□□□ -0.32
TOP3A-214ENST00000582981 ZSCAN30Q86W11 494 aa13.07□□□□□ -0.32
TOP3A-214ENST00000582981 ZBTB40Q9NUA8 1239 aa13.07□□□□□ -0.32
TOP3A-214ENST00000582981 ANKRD36BQ8N2N9 1353 aa13.07□□□□□ -0.32
TOP3A-214ENST00000582981 STAG3Q9UJ98 1225 aa13.06□□□□□ -0.32
TOP3A-214ENST00000582981 EFCAB6Q5THR3 1501 aa13.06□□□□□ -0.32
TOP3A-214ENST00000582981 UQCRHLA0A096LP55 91 aa13.06□□□□□ -0.32
TOP3A-214ENST00000582981 OFD1O75665 1012 aa13.06□□□□□ -0.32
TOP3A-214ENST00000582981 UQCRHP07919 91 aa13.06□□□□□ -0.32
TOP3A-214ENST00000582981 NASPP49321 788 aaPredicted RBP13.06□□□□□ -0.32
TOP3A-214ENST00000582981 CCDC27Q2M243 656 aa13.06□□□□□ -0.32
TOP3A-214ENST00000582981 BBXQ8WY36 941 aaPredicted RBP13.06□□□□□ -0.32
TOP3A-214ENST00000582981 CHAMP1Q96JM3 812 aa13.06□□□□□ -0.32
TOP3A-214ENST00000582981 QRICH2Q9H0J4 1663 aa13.06□□□□□ -0.32
TOP3A-214ENST00000582981 TNPO1Q92973 898 aaKnown RBP13.05□□□□□ -0.32
TOP3A-214ENST00000582981 CHD1LQ86WJ1 897 aa13.05□□□□□ -0.32
TOP3A-214ENST00000582981 TULP4Q9NRJ4 1543 aa13.05□□□□□ -0.32
TOP3A-214ENST00000582981 VGFO15240 615 aaPredicted RBP13.05□□□□□ -0.32
TOP3A-214ENST00000582981 XPCQ01831 940 aaPredicted RBP13.05□□□□□ -0.32
TOP3A-214ENST00000582981 MLECQ14165 292 aa13.05□□□□□ -0.32
TOP3A-214ENST00000582981 RRS1Q15050 365 aaKnown RBP13.05□□□□□ -0.32
TOP3A-214ENST00000582981 SMC5Q8IY18 1101 aa13.05□□□□□ -0.32
TOP3A-214ENST00000582981 SBNO2Q9Y2G9 1366 aa13.04□□□□□ -0.32
TOP3A-214ENST00000582981 FOXD4L5Q5VV16 416 aaPredicted RBP13.04□□□□□ -0.32
TOP3A-214ENST00000582981 FOXD4L4Q8WXT5 416 aaPredicted RBP13.04□□□□□ -0.32
TOP3A-214ENST00000582981 UHRF1BP1LA0JNW5 1464 aa13.04□□□□□ -0.32
TOP3A-214ENST00000582981 VIRMAQ69YN4 1812 aaKnown RBP13.04□□□□□ -0.32
TOP3A-214ENST00000582981 C16orf71Q8IYS4 520 aaPredicted RBP13.04□□□□□ -0.32
TOP3A-214ENST00000582981 MAP7D2Q96T17 732 aa13.04□□□□□ -0.32
TOP3A-214ENST00000582981 CDK19Q9BWU1 502 aa13.04□□□□□ -0.32
TOP3A-214ENST00000582981 DEPDC5O75140 1603 aa13.03□□□□□ -0.32
TOP3A-214ENST00000582981 INO80Q9ULG1 1556 aaPredicted RBP13.03□□□□□ -0.32
TOP3A-214ENST00000582981 HDAC1Q13547 482 aaPredicted RBP13.03□□□□□ -0.32
TOP3A-214ENST00000582981 SSFA2P28290 1259 aa13.03□□□□□ -0.32
TOP3A-214ENST00000582981 TPRNQ4KMQ1 711 aa13.03□□□□□ -0.32
TOP3A-214ENST00000582981 OTUD7AQ8TE49 926 aaPredicted RBP13.03□□□□□ -0.32
TOP3A-214ENST00000582981 BCL11BQ9C0K0 894 aaPredicted RBP13.03□□□□□ -0.32
TOP3A-214ENST00000582981 ADGRB1O14514 1584 aa13.03□□□□□ -0.32
TOP3A-214ENST00000582981 CCDC173Q0VFZ6 552 aa13.02□□□□□ -0.32
TOP3A-214ENST00000582981 ZNF692Q9BU19 519 aaPredicted RBP13.02□□□□□ -0.32
TOP3A-214ENST00000582981 VWDEQ8N2E2 1590 aa13.02□□□□□ -0.32
TOP3A-214ENST00000582981 NCLP19338 710 aaKnown RBP13.02□□□□□ -0.33
TOP3A-214ENST00000582981 NUCB1Q02818 461 aa13.02□□□□□ -0.33
TOP3A-214ENST00000582981 TBC1D9Q6ZT07 1266 aa13.02□□□□□ -0.33
TOP3A-214ENST00000582981 ISY1Q9ULR0 285 aaKnown RBP13.02□□□□□ -0.33
TOP3A-214ENST00000582981 NME9Q86XW9 330 aa13.01□□□□□ -0.33
TOP3A-214ENST00000582981 SIRT2Q8IXJ6 389 aa13.01□□□□□ -0.33
TOP3A-214ENST00000582981 TERF2IPQ9NYB0 399 aa13.01□□□□□ -0.33
TOP3A-214ENST00000582981 SMARCA5O60264 1052 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms