RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 TNRQ92752 1358 aa17.65■□□□□ 0.42
SRSF1-205ENST00000582730 RGS3P49796 1198 aa17.65■□□□□ 0.42
SRSF1-205ENST00000582730 TSR2Q969E8 191 aaKnown RBP17.64■□□□□ 0.41
SRSF1-205ENST00000582730 BACH2Q9BYV9 841 aa17.64■□□□□ 0.41
SRSF1-205ENST00000582730 RARSP54136 660 aaKnown RBP17.64■□□□□ 0.41
SRSF1-205ENST00000582730 NCKAP5LQ9HCH0 1330 aa17.64■□□□□ 0.41
SRSF1-205ENST00000582730 WASLO00401 505 aaPredicted RBP17.63■□□□□ 0.41
SRSF1-205ENST00000582730 PHF23Q9BUL5 403 aaPredicted RBP17.63■□□□□ 0.41
SRSF1-205ENST00000582730 CCDC27Q2M243 656 aa17.63■□□□□ 0.41
SRSF1-205ENST00000582730 IL27Q8NEV9 243 aa17.63■□□□□ 0.41
SRSF1-205ENST00000582730 CLUAP1Q96AJ1 413 aa17.63■□□□□ 0.41
SRSF1-205ENST00000582730 TMPOP42166 694 aaKnown RBP17.62■□□□□ 0.41
SRSF1-205ENST00000582730 CEBPAP49715 358 aaPredicted RBP17.62■□□□□ 0.41
SRSF1-205ENST00000582730 PDE3AQ14432 1141 aa17.61■□□□□ 0.41
SRSF1-205ENST00000582730 NLRP1Q9C000 1473 aa17.61■□□□□ 0.41
SRSF1-205ENST00000582730 NUTM2FA1L443 756 aa17.61■□□□□ 0.41
SRSF1-205ENST00000582730 PPIP5K1Q6PFW1 1433 aa17.61■□□□□ 0.41
SRSF1-205ENST00000582730 NME9Q86XW9 330 aa17.61■□□□□ 0.41
SRSF1-205ENST00000582730 TNNQ9UQP3 1299 aa17.61■□□□□ 0.41
SRSF1-205ENST00000582730 DLC1Q96QB1 1528 aa17.6■□□□□ 0.41
SRSF1-205ENST00000582730 RIPK4P57078 832 aa17.6■□□□□ 0.41
SRSF1-205ENST00000582730 NUDT16Q96DE0 195 aaKnown RBP17.6■□□□□ 0.41
SRSF1-205ENST00000582730 PLEKHF1Q96S99 279 aa17.6■□□□□ 0.41
SRSF1-205ENST00000582730 ZRANB1Q9UGI0 708 aa17.59■□□□□ 0.41
SRSF1-205ENST00000582730 NEFMP07197 916 aa17.59■□□□□ 0.41
SRSF1-205ENST00000582730 MED14O60244 1454 aa17.58■□□□□ 0.4
SRSF1-205ENST00000582730 COL3A1P02461 1466 aaPredicted RBP17.58■□□□□ 0.4
SRSF1-205ENST00000582730 POLKQ9UBT6 870 aa17.58■□□□□ 0.4
SRSF1-205ENST00000582730 HMOX1P09601 288 aa17.58■□□□□ 0.4
SRSF1-205ENST00000582730 EMILIN1Q9Y6C2 1016 aa17.58■□□□□ 0.4
SRSF1-205ENST00000582730 SETD1AO15047 1707 aaKnown RBP17.57■□□□□ 0.4
SRSF1-205ENST00000582730 ATP7BP35670 1465 aa17.57■□□□□ 0.4
SRSF1-205ENST00000582730 TMEM2Q9UHN6 1383 aa17.57■□□□□ 0.4
SRSF1-205ENST00000582730 EXOSC9Q06265 439 aaKnown RBP17.57■□□□□ 0.4
SRSF1-205ENST00000582730 NRXN3Q9Y4C0 1643 aa17.57■□□□□ 0.4
SRSF1-205ENST00000582730 ANKRD26Q9UPS8 1709 aa17.57■□□□□ 0.4
SRSF1-205ENST00000582730 IGHDP01880 384 aa17.56■□□□□ 0.4
SRSF1-205ENST00000582730 PRKAR2BP31323 418 aa17.56■□□□□ 0.4
SRSF1-205ENST00000582730 TRIM35Q9UPQ4 493 aa17.56■□□□□ 0.4
SRSF1-205ENST00000582730 CCDC61Q9Y6R9 512 aa17.56■□□□□ 0.4
SRSF1-205ENST00000582730 LAS1LQ9Y4W2 734 aaKnown RBP17.56■□□□□ 0.4
SRSF1-205ENST00000582730 KIF20BQ96Q89 1820 aa17.56■□□□□ 0.4
SRSF1-205ENST00000582730 RLBP1P12271 317 aa17.56■□□□□ 0.4
SRSF1-205ENST00000582730 SLC26A8Q96RN1 970 aa17.56■□□□□ 0.4
SRSF1-205ENST00000582730 PNNQ9H307 717 aaKnown RBP17.56■□□□□ 0.4
SRSF1-205ENST00000582730 RTN4Q9NQC3 1192 aaKnown RBP17.56■□□□□ 0.4
SRSF1-205ENST00000582730 SMC4Q9NTJ3 1288 aa17.55■□□□□ 0.4
SRSF1-205ENST00000582730 FTSJ3Q8IY81 847 aaKnown RBP17.54■□□□□ 0.4
SRSF1-205ENST00000582730 COG3Q96JB2 828 aa17.54■□□□□ 0.4
SRSF1-205ENST00000582730 ADGRB2O60241 1585 aa17.54■□□□□ 0.4
SRSF1-205ENST00000582730 RRS1Q15050 365 aaKnown RBP17.54■□□□□ 0.4
SRSF1-205ENST00000582730 LTKP29376 864 aa17.53■□□□□ 0.4
SRSF1-205ENST00000582730 EDC4Q6P2E9 1401 aaKnown RBP17.53■□□□□ 0.4
SRSF1-205ENST00000582730 PNPLA6Q8IY17 1366 aa17.52■□□□□ 0.4
SRSF1-205ENST00000582730 ROBO2Q9HCK4 1378 aa17.52■□□□□ 0.39
SRSF1-205ENST00000582730 FCHSD2O94868 740 aa17.52■□□□□ 0.39
SRSF1-205ENST00000582730 ZKSCAN2Q63HK3 967 aa17.51■□□□□ 0.39
SRSF1-205ENST00000582730 NCBP3Q53F19 620 aaKnown RBP17.51■□□□□ 0.39
SRSF1-205ENST00000582730 EID1Q9Y6B2 187 aa17.51■□□□□ 0.39
SRSF1-205ENST00000582730 FAM161AQ3B820 660 aa17.5■□□□□ 0.39
SRSF1-205ENST00000582730 RSPH6AQ9H0K4 717 aa17.5■□□□□ 0.39
SRSF1-205ENST00000582730 PRR36Q9H6K5 1346 aa17.5■□□□□ 0.39
SRSF1-205ENST00000582730 CPSF1Q10570 1443 aaKnown RBP17.5■□□□□ 0.39
SRSF1-205ENST00000582730 FAM135BQ49AJ0 1406 aa17.5■□□□□ 0.39
SRSF1-205ENST00000582730 SOX12O15370 315 aa17.5■□□□□ 0.39
SRSF1-205ENST00000582730 USP35Q9P2H5 1018 aa17.5■□□□□ 0.39
SRSF1-205ENST00000582730 THUMPD2Q9BTF0 503 aaKnown RBP17.5■□□□□ 0.39
SRSF1-205ENST00000582730 PHACTR3Q96KR7 559 aa17.49■□□□□ 0.39
SRSF1-205ENST00000582730 SSH1Q8WYL5 1049 aa17.49■□□□□ 0.39
SRSF1-205ENST00000582730 LRRC7Q96NW7 1537 aa17.49■□□□□ 0.39
SRSF1-205ENST00000582730 UBR1Q8IWV7 1749 aa17.48■□□□□ 0.39
SRSF1-205ENST00000582730 DZIP1LQ8IYY4 767 aaKnown RBP17.48■□□□□ 0.39
SRSF1-205ENST00000582730 TRHP20396 242 aaPredicted RBP17.48■□□□□ 0.39
SRSF1-205ENST00000582730 PCDHB15Q9Y5E8 787 aa17.48■□□□□ 0.39
SRSF1-205ENST00000582730 ADAMTS13Q76LX8 1427 aa17.47■□□□□ 0.39
SRSF1-205ENST00000582730 TECPR2O15040 1411 aa17.47■□□□□ 0.39
SRSF1-205ENST00000582730 PMFBP1Q8TBY8 1022 aa17.47■□□□□ 0.39
SRSF1-205ENST00000582730 SIRT1Q96EB6 747 aa17.47■□□□□ 0.39
SRSF1-205ENST00000582730 CPS1P31327 1500 aa17.47■□□□□ 0.39
SRSF1-205ENST00000582730 MAP2P11137 1827 aaKnown RBP17.46■□□□□ 0.39
SRSF1-205ENST00000582730 MVPQ14764 893 aaKnown RBP17.46■□□□□ 0.39
SRSF1-205ENST00000582730 ITPRIPQ8IWB1 547 aa17.46■□□□□ 0.39
SRSF1-205ENST00000582730 CT47B1P0C2W7 299 aaPredicted RBP17.46■□□□□ 0.39
SRSF1-205ENST00000582730 C8orf34Q49A92 452 aa17.46■□□□□ 0.39
SRSF1-205ENST00000582730 ZNF692Q9BU19 519 aaPredicted RBP17.46■□□□□ 0.39
SRSF1-205ENST00000582730 CDC42BPGQ6DT37 1551 aa17.45■□□□□ 0.38
SRSF1-205ENST00000582730 IL16Q14005 1332 aa17.45■□□□□ 0.38
SRSF1-205ENST00000582730 IL13P35225 146 aa17.45■□□□□ 0.38
SRSF1-205ENST00000582730 ACEP12821 1306 aa17.45■□□□□ 0.38
SRSF1-205ENST00000582730 TRIM27P14373 513 aa17.45■□□□□ 0.38
SRSF1-205ENST00000582730 NFE2L2Q16236 605 aa17.45■□□□□ 0.38
SRSF1-205ENST00000582730 NOB1Q9ULX3 412 aaKnown RBP17.45■□□□□ 0.38
SRSF1-205ENST00000582730 PLEKHG1Q9ULL1 1385 aa17.44■□□□□ 0.38
SRSF1-205ENST00000582730 AMOTL2Q9Y2J4 779 aa17.43■□□□□ 0.38
SRSF1-205ENST00000582730 KNDC1Q76NI1 1749 aa17.43■□□□□ 0.38
SRSF1-205ENST00000582730 ELL2O00472 640 aaPredicted RBP17.43■□□□□ 0.38
SRSF1-205ENST00000582730 ATF7IPQ6VMQ6 1270 aa17.42■□□□□ 0.38
SRSF1-205ENST00000582730 RWDD1Q9H446 243 aaPredicted RBP17.42■□□□□ 0.38
SRSF1-205ENST00000582730 TTC21BQ7Z4L5 1316 aa17.42■□□□□ 0.38
SRSF1-205ENST00000582730 DDRGK1Q96HY6 314 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms