RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 RWDD1Q9H446 243 aaPredicted RBP12.95□□□□□ -0.34
TRAPPC8-211ENST00000582539 SLFN5Q08AF3 891 aa12.94□□□□□ -0.34
TRAPPC8-211ENST00000582539 RNF123Q5XPI4 1314 aa12.94□□□□□ -0.34
TRAPPC8-211ENST00000582539 PTPRMP28827 1452 aa12.94□□□□□ -0.34
TRAPPC8-211ENST00000582539 APAF1O14727 1248 aa12.94□□□□□ -0.34
TRAPPC8-211ENST00000582539 A0A1W2PP64 1363 aa12.93□□□□□ -0.34
TRAPPC8-211ENST00000582539 CFAP65Q6ZU64 1925 aaKnown RBP12.93□□□□□ -0.34
TRAPPC8-211ENST00000582539 AMPHP49418 695 aa12.92□□□□□ -0.34
TRAPPC8-211ENST00000582539 FER1L4A9Z1Z3 1794 aa12.92□□□□□ -0.34
TRAPPC8-211ENST00000582539 AMOTL2Q9Y2J4 779 aa12.92□□□□□ -0.34
TRAPPC8-211ENST00000582539 TULP4Q9NRJ4 1543 aa12.92□□□□□ -0.34
TRAPPC8-211ENST00000582539 ARHGAP23Q9P227 1491 aa12.92□□□□□ -0.34
TRAPPC8-211ENST00000582539 ZKSCAN2Q63HK3 967 aa12.92□□□□□ -0.34
TRAPPC8-211ENST00000582539 API5Q9BZZ5 524 aaKnown RBP12.92□□□□□ -0.34
TRAPPC8-211ENST00000582539 SALL2Q9Y467 1007 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC8-211ENST00000582539 HTATSF1O43719 755 aaKnown RBP12.91□□□□□ -0.34
TRAPPC8-211ENST00000582539 TNNT2P45379 298 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC8-211ENST00000582539 TCP11L2Q8N4U5 519 aa12.91□□□□□ -0.34
TRAPPC8-211ENST00000582539 ALDH1L2Q3SY69 923 aa12.9□□□□□ -0.34
TRAPPC8-211ENST00000582539 DMRT2Q9Y5R5 561 aa12.9□□□□□ -0.34
TRAPPC8-211ENST00000582539 NCOA3Q9Y6Q9 1424 aa12.9□□□□□ -0.34
TRAPPC8-211ENST00000582539 PPM1GO15355 546 aaPredicted RBP12.9□□□□□ -0.35
TRAPPC8-211ENST00000582539 CDK12Q9NYV4 1490 aaPredicted RBP12.9□□□□□ -0.35
TRAPPC8-211ENST00000582539 ADGRB2O60241 1585 aa12.89□□□□□ -0.35
TRAPPC8-211ENST00000582539 DDX19BQ9UMR2 479 aa12.89□□□□□ -0.35
TRAPPC8-211ENST00000582539 GGNBP2Q9H3C7 697 aa12.89□□□□□ -0.35
TRAPPC8-211ENST00000582539 BABAM1Q9NWV8 329 aa12.89□□□□□ -0.35
TRAPPC8-211ENST00000582539 NFE2L2Q16236 605 aa12.88□□□□□ -0.35
TRAPPC8-211ENST00000582539 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.88□□□□□ -0.35
TRAPPC8-211ENST00000582539 CDC42BPGQ6DT37 1551 aa12.88□□□□□ -0.35
TRAPPC8-211ENST00000582539 ATF3P18847 181 aa12.88□□□□□ -0.35
TRAPPC8-211ENST00000582539 ITSN1Q15811 1721 aa12.88□□□□□ -0.35
TRAPPC8-211ENST00000582539 RTL1A6NKG5 1358 aa12.88□□□□□ -0.35
TRAPPC8-211ENST00000582539 SIGLEC1Q9BZZ2 1709 aa12.87□□□□□ -0.35
TRAPPC8-211ENST00000582539 IFT57Q9NWB7 429 aa12.87□□□□□ -0.35
TRAPPC8-211ENST00000582539 FYB1O15117 783 aa12.87□□□□□ -0.35
TRAPPC8-211ENST00000582539 RIPK4P57078 832 aa12.86□□□□□ -0.35
TRAPPC8-211ENST00000582539 CARD14Q9BXL6 1004 aa12.86□□□□□ -0.35
TRAPPC8-211ENST00000582539 KCNA6P17658 529 aa12.86□□□□□ -0.35
TRAPPC8-211ENST00000582539 CCDC184Q52MB2 194 aa12.86□□□□□ -0.35
TRAPPC8-211ENST00000582539 SETD1BQ9UPS6 1966 aaKnown RBP12.86□□□□□ -0.35
TRAPPC8-211ENST00000582539 CEP170BQ9Y4F5 1589 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC8-211ENST00000582539 WWC1Q8IX03 1113 aa12.85□□□□□ -0.35
TRAPPC8-211ENST00000582539 MYOM1P52179 1685 aa12.85□□□□□ -0.35
TRAPPC8-211ENST00000582539 UBR1Q8IWV7 1749 aa12.85□□□□□ -0.35
TRAPPC8-211ENST00000582539 ANKRD26Q9UPS8 1709 aa12.85□□□□□ -0.35
TRAPPC8-211ENST00000582539 FLT4P35916 1363 aa12.85□□□□□ -0.35
TRAPPC8-211ENST00000582539 SMC4Q9NTJ3 1288 aa12.85□□□□□ -0.35
TRAPPC8-211ENST00000582539 STK31Q9BXU1 1019 aa12.84□□□□□ -0.35
TRAPPC8-211ENST00000582539 NPHP4O75161 1426 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC8-211ENST00000582539 CCDC146Q8IYE0 955 aa12.84□□□□□ -0.35
TRAPPC8-211ENST00000582539 HMMRO75330 724 aa12.84□□□□□ -0.35
TRAPPC8-211ENST00000582539 TMPOP42166 694 aaKnown RBP12.84□□□□□ -0.35
TRAPPC8-211ENST00000582539 BECN1Q14457 450 aa12.84□□□□□ -0.35
TRAPPC8-211ENST00000582539 PHF8Q9UPP1 1060 aa12.84□□□□□ -0.35
TRAPPC8-211ENST00000582539 IL27Q8NEV9 243 aa12.83□□□□□ -0.36
TRAPPC8-211ENST00000582539 ARHGEF10O15013 1369 aa12.83□□□□□ -0.36
TRAPPC8-211ENST00000582539 PROSER2Q86WR7 435 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC8-211ENST00000582539 LRRC7Q96NW7 1537 aa12.83□□□□□ -0.36
TRAPPC8-211ENST00000582539 SBNO1A3KN83 1393 aa12.83□□□□□ -0.36
TRAPPC8-211ENST00000582539 NEUROD2Q15784 382 aa12.83□□□□□ -0.36
TRAPPC8-211ENST00000582539 USP31Q70CQ4 1352 aa12.83□□□□□ -0.36
TRAPPC8-211ENST00000582539 CPSF1Q10570 1443 aaKnown RBP12.82□□□□□ -0.36
TRAPPC8-211ENST00000582539 CASC1Q6TDU7 716 aa12.82□□□□□ -0.36
TRAPPC8-211ENST00000582539 WAPLQ7Z5K2 1190 aa12.82□□□□□ -0.36
TRAPPC8-211ENST00000582539 ARHGAP45Q92619 1136 aa12.82□□□□□ -0.36
TRAPPC8-211ENST00000582539 DNAJC5Q9H3Z4 198 aa12.82□□□□□ -0.36
TRAPPC8-211ENST00000582539 PLEKHG2Q9H7P9 1386 aa12.82□□□□□ -0.36
TRAPPC8-211ENST00000582539 DUSP27Q5VZP5 1158 aa12.82□□□□□ -0.36
TRAPPC8-211ENST00000582539 KIF20BQ96Q89 1820 aa12.82□□□□□ -0.36
TRAPPC8-211ENST00000582539 ACEP12821 1306 aa12.82□□□□□ -0.36
TRAPPC8-211ENST00000582539 CADPS2Q86UW7 1296 aa12.81□□□□□ -0.36
TRAPPC8-211ENST00000582539 DZIP1LQ8IYY4 767 aaKnown RBP12.81□□□□□ -0.36
TRAPPC8-211ENST00000582539 AMOTQ4VCS5 1084 aa12.81□□□□□ -0.36
TRAPPC8-211ENST00000582539 ADAMTS13Q76LX8 1427 aa12.8□□□□□ -0.36
TRAPPC8-211ENST00000582539 NLRP6P59044 892 aa12.8□□□□□ -0.36
TRAPPC8-211ENST00000582539 RTL5Q5HYW3 569 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC8-211ENST00000582539 METP08581 1390 aa12.8□□□□□ -0.36
TRAPPC8-211ENST00000582539 PLEKHO1Q53GL0 409 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC8-211ENST00000582539 FANCIQ9NVI1 1328 aa12.8□□□□□ -0.36
TRAPPC8-211ENST00000582539 PNPLA6Q8IY17 1366 aa12.8□□□□□ -0.36
TRAPPC8-211ENST00000582539 USP6P35125 1406 aa12.8□□□□□ -0.36
TRAPPC8-211ENST00000582539 ADGRL3Q9HAR2 1447 aa12.8□□□□□ -0.36
TRAPPC8-211ENST00000582539 HSP90AB1P08238 724 aaKnown RBP12.79□□□□□ -0.36
TRAPPC8-211ENST00000582539 HMGB2P26583 209 aaKnown RBP12.79□□□□□ -0.36
TRAPPC8-211ENST00000582539 PRKAR2BP31323 418 aa12.79□□□□□ -0.36
TRAPPC8-211ENST00000582539 SLC26A8Q96RN1 970 aa12.79□□□□□ -0.36
TRAPPC8-211ENST00000582539 PAK3O75914 559 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC8-211ENST00000582539 FRAT1Q92837 279 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC8-211ENST00000582539 PTPRUQ92729 1446 aa12.78□□□□□ -0.36
TRAPPC8-211ENST00000582539 ZNF521Q96K83 1311 aa12.78□□□□□ -0.36
TRAPPC8-211ENST00000582539 PLEKHH1Q9ULM0 1364 aa12.78□□□□□ -0.36
TRAPPC8-211ENST00000582539 C1orf141Q5JVX7 400 aa12.78□□□□□ -0.36
TRAPPC8-211ENST00000582539 C3P01024 1663 aa12.78□□□□□ -0.36
TRAPPC8-211ENST00000582539 B4GALNT3Q6L9W6 998 aa12.77□□□□□ -0.36
TRAPPC8-211ENST00000582539 TRMT2AQ8IZ69 625 aaKnown RBP12.77□□□□□ -0.36
TRAPPC8-211ENST00000582539 CLUAP1Q96AJ1 413 aa12.77□□□□□ -0.36
TRAPPC8-211ENST00000582539 MSH6P52701 1360 aa12.77□□□□□ -0.36
TRAPPC8-211ENST00000582539 ABTB2Q8N961 1025 aa12.77□□□□□ -0.37
TRAPPC8-211ENST00000582539 IRX6P78412 446 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms