RNA–Protein interactions for RNA: ENST00000581394.1

TTC39C-207, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-207ENST00000581394 DIXDC1Q155Q3 683 aa10.12□□□□□ -0.79
TTC39C-207ENST00000581394 ZC3H15Q8WU90 426 aaKnown RBP10.12□□□□□ -0.79
TTC39C-207ENST00000581394 RSBN1LQ6PCB5 846 aaPredicted RBP10.11□□□□□ -0.79
TTC39C-207ENST00000581394 TBC1D2Q9BYX2 928 aa10.11□□□□□ -0.79
TTC39C-207ENST00000581394 NNTQ13423 1086 aa10.1□□□□□ -0.79
TTC39C-207ENST00000581394 LYPD8Q6UX82 237 aa10.1□□□□□ -0.79
TTC39C-207ENST00000581394 ZFP42Q96MM3 310 aa10.09□□□□□ -0.79
TTC39C-207ENST00000581394 SPTLC1O15269 473 aa10.08□□□□□ -0.8
TTC39C-207ENST00000581394 IRF7Q92985 503 aa10.08□□□□□ -0.8
TTC39C-207ENST00000581394 CFAP99D6REC4 459 aa10.07□□□□□ -0.8
TTC39C-207ENST00000581394 H3BM21 787 aa10.07□□□□□ -0.8
TTC39C-207ENST00000581394 CTHP32929 405 aa10.07□□□□□ -0.8
TTC39C-207ENST00000581394 GMPRP36959 345 aa10.07□□□□□ -0.8
TTC39C-207ENST00000581394 PARP9Q8IXQ6 854 aa10.07□□□□□ -0.8
TTC39C-207ENST00000581394 FAM174AQ8TBP5 190 aa10.07□□□□□ -0.8
TTC39C-207ENST00000581394 PCDHB15Q9Y5E8 787 aa10.07□□□□□ -0.8
TTC39C-207ENST00000581394 ADH1CP00326 375 aa10.06□□□□□ -0.8
TTC39C-207ENST00000581394 F12P00748 615 aaPredicted RBP10.06□□□□□ -0.8
TTC39C-207ENST00000581394 TIMP2P16035 220 aa10.06□□□□□ -0.8
TTC39C-207ENST00000581394 MRPL14Q6P1L8 145 aaKnown RBP10.06□□□□□ -0.8
TTC39C-207ENST00000581394 ZBTB3Q9H5J0 574 aa10.06□□□□□ -0.8
TTC39C-207ENST00000581394 HRCP23327 699 aa10.05□□□□□ -0.8
TTC39C-207ENST00000581394 PRPF38BQ5VTL8 546 aaKnown RBP10.05□□□□□ -0.8
TTC39C-207ENST00000581394 CDK15Q96Q40 435 aa10.05□□□□□ -0.8
TTC39C-207ENST00000581394 KLF16Q9BXK1 252 aaPredicted RBP10.05□□□□□ -0.8
TTC39C-207ENST00000581394 FAM181BA6NEQ2 426 aa10.04□□□□□ -0.8
TTC39C-207ENST00000581394 WDR4P57081 412 aaKnown RBP10.04□□□□□ -0.8
TTC39C-207ENST00000581394 TRIM66O15016 1216 aa10.03□□□□□ -0.8
TTC39C-207ENST00000581394 LORP23490 312 aaPredicted RBP10.03□□□□□ -0.8
TTC39C-207ENST00000581394 SCARF1Q14162 830 aa10.03□□□□□ -0.8
TTC39C-207ENST00000581394 VEGFBP49765 207 aa10.02□□□□□ -0.81
TTC39C-207ENST00000581394 FOXJ1Q92949 421 aa10.02□□□□□ -0.81
TTC39C-207ENST00000581394 MAP10Q9P2G4 905 aa10.02□□□□□ -0.81
TTC39C-207ENST00000581394 RIC3Q7Z5B4 369 aa10.01□□□□□ -0.81
TTC39C-207ENST00000581394 ZSCAN1Q8NBB4 408 aa10.01□□□□□ -0.81
TTC39C-207ENST00000581394 PURBQ96QR8 312 aaKnown RBP10.01□□□□□ -0.81
TTC39C-207ENST00000581394 ERBB4Q15303 1308 aa10.01□□□□□ -0.81
TTC39C-207ENST00000581394 NR5A1Q13285 461 aa9.99□□□□□ -0.81
TTC39C-207ENST00000581394 CABLES1Q8TDN4 633 aa9.99□□□□□ -0.81
TTC39C-207ENST00000581394 AK7Q96M32 723 aa9.99□□□□□ -0.81
TTC39C-207ENST00000581394 TUSC1Q2TAM9 212 aa9.98□□□□□ -0.81
TTC39C-207ENST00000581394 C4orf48Q5BLP8 95 aa9.98□□□□□ -0.81
TTC39C-207ENST00000581394 BPHLQ86WA6 291 aaPredicted RBP9.97□□□□□ -0.81
TTC39C-207ENST00000581394 PER1O15534 1290 aaPredicted RBP9.96□□□□□ -0.82
TTC39C-207ENST00000581394 ZIC2O95409 532 aaPredicted RBP9.96□□□□□ -0.82
TTC39C-207ENST00000581394 VSIG8P0DPA2 414 aa9.96□□□□□ -0.82
TTC39C-207ENST00000581394 GRM5P41594 1212 aa9.96□□□□□ -0.82
TTC39C-207ENST00000581394 ARID5BQ14865 1188 aa9.96□□□□□ -0.82
TTC39C-207ENST00000581394 NR3C2P08235 984 aa9.95□□□□□ -0.82
TTC39C-207ENST00000581394 AGERQ15109 404 aa9.95□□□□□ -0.82
TTC39C-207ENST00000581394 CSPP1Q1MSJ5 1256 aa9.95□□□□□ -0.82
TTC39C-207ENST00000581394 ITPKCQ96DU7 683 aa9.95□□□□□ -0.82
TTC39C-207ENST00000581394 ZFAND3Q9H8U3 227 aa9.95□□□□□ -0.82
TTC39C-207ENST00000581394 SOBPA7XYQ1 873 aa9.94□□□□□ -0.82
TTC39C-207ENST00000581394 MYSM1Q5VVJ2 828 aa9.94□□□□□ -0.82
TTC39C-207ENST00000581394 ARMC2Q8NEN0 867 aa9.94□□□□□ -0.82
TTC39C-207ENST00000581394 C1QTNF2Q9BXJ5 285 aa9.94□□□□□ -0.82
TTC39C-207ENST00000581394 LIMD1Q9UGP4 676 aa9.94□□□□□ -0.82
TTC39C-207ENST00000581394 LILRB3O75022 631 aa9.93□□□□□ -0.82
TTC39C-207ENST00000581394 QPCTQ16769 361 aa9.93□□□□□ -0.82
TTC39C-207ENST00000581394 SH3RF1Q7Z6J0 888 aa9.92□□□□□ -0.82
TTC39C-207ENST00000581394 MAP4K5Q9Y4K4 846 aa9.91□□□□□ -0.82
TTC39C-207ENST00000581394 NUTM2BA6NNL0 878 aaPredicted RBP9.9□□□□□ -0.82
TTC39C-207ENST00000581394 NUTM2EB1AL46 878 aaPredicted RBP9.9□□□□□ -0.82
TTC39C-207ENST00000581394 PDE4DQ08499 809 aa9.9□□□□□ -0.82
TTC39C-207ENST00000581394 NBPF14Q5TI25 921 aa9.9□□□□□ -0.82
TTC39C-207ENST00000581394 NUTM2DQ5VT03 806 aaPredicted RBP9.9□□□□□ -0.82
TTC39C-207ENST00000581394 SH3BP5LQ7L8J4 393 aa9.9□□□□□ -0.82
TTC39C-207ENST00000581394 NUTM2AQ8IVF1 878 aaPredicted RBP9.9□□□□□ -0.82
TTC39C-207ENST00000581394 TRMT44Q8IYL2 757 aaKnown RBP9.9□□□□□ -0.82
TTC39C-207ENST00000581394 MEIOBQ8N635 442 aa9.9□□□□□ -0.82
TTC39C-207ENST00000581394 TSC1Q92574 1164 aa9.9□□□□□ -0.82
TTC39C-207ENST00000581394 MAN1A2O60476 641 aa9.89□□□□□ -0.83
TTC39C-207ENST00000581394 C6orf118Q5T5N4 469 aa9.89□□□□□ -0.83
TTC39C-207ENST00000581394 LINC00528Q8N1L1 170 aa9.89□□□□□ -0.83
TTC39C-207ENST00000581394 UPP2O95045 317 aa9.88□□□□□ -0.83
TTC39C-207ENST00000581394 HELBQ8NG08 1087 aaPredicted RBP9.88□□□□□ -0.83
TTC39C-207ENST00000581394 BMP2P12643 396 aa9.87□□□□□ -0.83
TTC39C-207ENST00000581394 FSHRP23945 695 aa9.87□□□□□ -0.83
TTC39C-207ENST00000581394 SOS2Q07890 1332 aaPredicted RBP9.86□□□□□ -0.83
TTC39C-207ENST00000581394 PPFIA3O75145 1194 aa9.86□□□□□ -0.83
TTC39C-207ENST00000581394 VASH1Q7L8A9 365 aaPredicted RBP9.86□□□□□ -0.83
TTC39C-207ENST00000581394 GPKOWQ92917 476 aaPredicted RBP eCLIP9.86□□□□□ -0.83
TTC39C-207ENST00000581394 RTL5Q5HYW3 569 aaPredicted RBP9.85□□□□□ -0.83
TTC39C-207ENST00000581394 EMILIN1Q9Y6C2 1016 aa9.85□□□□□ -0.83
TTC39C-207ENST00000581394 CLK2P49760 499 aaKnown RBP9.84□□□□□ -0.83
TTC39C-207ENST00000581394 TSEN34Q9BSV6 310 aaKnown RBP9.84□□□□□ -0.83
TTC39C-207ENST00000581394 CCDC116Q8IYX3 515 aa9.83□□□□□ -0.84
TTC39C-207ENST00000581394 DNMT3LQ9UJW3 386 aa9.83□□□□□ -0.84
TTC39C-207ENST00000581394 RSPH6AQ9H0K4 717 aa9.82□□□□□ -0.84
TTC39C-207ENST00000581394 MAGEB6P1A0A0J9YX57 407 aa9.81□□□□□ -0.84
TTC39C-207ENST00000581394 ERFEQ4G0M1 354 aa9.8□□□□□ -0.84
TTC39C-207ENST00000581394 SLC24A3Q9HC58 644 aa9.8□□□□□ -0.84
TTC39C-207ENST00000581394 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.79□□□□□ -0.84
TTC39C-207ENST00000581394 PDXDC2PQ6P474 469 aa9.78□□□□□ -0.84
TTC39C-207ENST00000581394 Q6ZVU0 165 aa9.78□□□□□ -0.84
TTC39C-207ENST00000581394 CARD14Q9BXL6 1004 aa9.78□□□□□ -0.84
TTC39C-207ENST00000581394 TTLL8A6PVC2 850 aa9.77□□□□□ -0.85
TTC39C-207ENST00000581394 CTDSPL2Q05D32 466 aa9.77□□□□□ -0.85
TTC39C-207ENST00000581394 PPP1R26Q5T8A7 1209 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms