RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 FYCO1Q9BQS8 1478 aa17.35■□□□□ 0.37
CSNK1D-217ENST00000581241 OFD1O75665 1012 aa17.35■□□□□ 0.37
CSNK1D-217ENST00000581241 FIBPO43427 364 aa17.34■□□□□ 0.37
CSNK1D-217ENST00000581241 RRP9O43818 475 aaKnown RBP17.34■□□□□ 0.37
CSNK1D-217ENST00000581241 PIP4K2AP48426 406 aaPredicted RBP17.34■□□□□ 0.37
CSNK1D-217ENST00000581241 CCDC30Q5VVM6 783 aa17.34■□□□□ 0.37
CSNK1D-217ENST00000581241 CCDC112Q8NEF3 446 aa17.34■□□□□ 0.37
CSNK1D-217ENST00000581241 NOB1Q9ULX3 412 aaKnown RBP17.33■□□□□ 0.37
CSNK1D-217ENST00000581241 WDR33Q9C0J8 1336 aaKnown RBP17.33■□□□□ 0.36
CSNK1D-217ENST00000581241 AXDND1Q5T1B0 1012 aaPredicted RBP17.33■□□□□ 0.36
CSNK1D-217ENST00000581241 TNMDQ9H2S6 317 aa17.33■□□□□ 0.36
CSNK1D-217ENST00000581241 ERC1Q8IUD2 1116 aa17.32■□□□□ 0.36
CSNK1D-217ENST00000581241 SART3Q15020 963 aaKnown RBP17.32■□□□□ 0.36
CSNK1D-217ENST00000581241 CLASRPQ8N2M8 674 aaKnown RBP17.32■□□□□ 0.36
CSNK1D-217ENST00000581241 TCP11L2Q8N4U5 519 aa17.32■□□□□ 0.36
CSNK1D-217ENST00000581241 TSPYL1Q9H0U9 437 aa17.32■□□□□ 0.36
CSNK1D-217ENST00000581241 DACH1Q9UI36 760 aa17.32■□□□□ 0.36
CSNK1D-217ENST00000581241 RRBP1Q9P2E9 1410 aaKnown RBP17.31■□□□□ 0.36
CSNK1D-217ENST00000581241 EXOSC9Q06265 439 aaKnown RBP17.31■□□□□ 0.36
CSNK1D-217ENST00000581241 STK38Q15208 465 aa17.31■□□□□ 0.36
CSNK1D-217ENST00000581241 SERPINC1P01008 464 aa17.31■□□□□ 0.36
CSNK1D-217ENST00000581241 GGNBP2Q9H3C7 697 aa17.31■□□□□ 0.36
CSNK1D-217ENST00000581241 KDM4AO75164 1064 aa17.3■□□□□ 0.36
CSNK1D-217ENST00000581241 ANKRD1Q15327 319 aa17.3■□□□□ 0.36
CSNK1D-217ENST00000581241 SKIDA1Q1XH10 827 aa17.3■□□□□ 0.36
CSNK1D-217ENST00000581241 CBFA2T2O43439 604 aa17.3■□□□□ 0.36
CSNK1D-217ENST00000581241 C1orf115Q9H7X2 142 aa17.3■□□□□ 0.36
CSNK1D-217ENST00000581241 AIMP1Q12904 312 aaKnown RBP17.3■□□□□ 0.36
CSNK1D-217ENST00000581241 PTPRGP23470 1445 aa17.3■□□□□ 0.36
CSNK1D-217ENST00000581241 SURF6O75683 361 aaKnown RBP17.3■□□□□ 0.36
CSNK1D-217ENST00000581241 GNAI2P04899 355 aa17.29■□□□□ 0.36
CSNK1D-217ENST00000581241 DNAJC2Q99543 621 aaKnown RBP17.29■□□□□ 0.36
CSNK1D-217ENST00000581241 CIZ1Q9ULV3 898 aaPredicted RBP17.29■□□□□ 0.36
CSNK1D-217ENST00000581241 CYP46A1Q9Y6A2 500 aa17.29■□□□□ 0.36
CSNK1D-217ENST00000581241 FMNL2Q96PY5 1086 aa17.29■□□□□ 0.36
CSNK1D-217ENST00000581241 FBXO3Q9UK99 471 aa17.29■□□□□ 0.36
CSNK1D-217ENST00000581241 ERLIN1O75477 346 aa17.29■□□□□ 0.36
CSNK1D-217ENST00000581241 EIF3JO75822 258 aaKnown RBP17.29■□□□□ 0.36
CSNK1D-217ENST00000581241 TXLNAP40222 546 aa17.29■□□□□ 0.36
CSNK1D-217ENST00000581241 FYB1O15117 783 aa17.29■□□□□ 0.36
CSNK1D-217ENST00000581241 CABP2Q9NPB3 220 aa17.29■□□□□ 0.36
CSNK1D-217ENST00000581241 NCOA2Q15596 1464 aa17.29■□□□□ 0.36
CSNK1D-217ENST00000581241 KIAA0754O94854 1291 aa17.29■□□□□ 0.36
CSNK1D-217ENST00000581241 MTHFSP49914 203 aa17.29■□□□□ 0.36
CSNK1D-217ENST00000581241 ERLIN2O94905 339 aa17.28■□□□□ 0.36
CSNK1D-217ENST00000581241 CT47B1P0C2W7 299 aaPredicted RBP17.28■□□□□ 0.36
CSNK1D-217ENST00000581241 PSME1Q06323 249 aa17.28■□□□□ 0.36
CSNK1D-217ENST00000581241 GOLGA6L10A6NI86 522 aa17.28■□□□□ 0.36
CSNK1D-217ENST00000581241 BRPF1P55201 1214 aaPredicted RBP17.28■□□□□ 0.36
CSNK1D-217ENST00000581241 PPFIBP1Q86W92 1011 aa17.28■□□□□ 0.36
CSNK1D-217ENST00000581241 FANCD2Q9BXW9 1451 aa17.28■□□□□ 0.36
CSNK1D-217ENST00000581241 CEBPZQ03701 1054 aaKnown RBP17.27■□□□□ 0.36
CSNK1D-217ENST00000581241 ZNHIT6Q9NWK9 470 aaKnown RBP17.27■□□□□ 0.36
CSNK1D-217ENST00000581241 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.27■□□□□ 0.363e-7■■■■■ 45.1
CSNK1D-217ENST00000581241 TBC1D2BQ9UPU7 963 aa17.27■□□□□ 0.36
CSNK1D-217ENST00000581241 ANKRD50Q9ULJ7 1429 aa17.27■□□□□ 0.36
CSNK1D-217ENST00000581241 BCAR3O75815 825 aa17.27■□□□□ 0.36
CSNK1D-217ENST00000581241 JMYQ8N9B5 988 aa17.27■□□□□ 0.36
CSNK1D-217ENST00000581241 ATAD2BQ9ULI0 1458 aa17.27■□□□□ 0.36
CSNK1D-217ENST00000581241 TWISTNBQ3B726 338 aaPredicted RBP17.27■□□□□ 0.35
CSNK1D-217ENST00000581241 ZFYVE27Q5T4F4 411 aa17.26■□□□□ 0.35
CSNK1D-217ENST00000581241 MCM4P33991 863 aa17.26■□□□□ 0.35
CSNK1D-217ENST00000581241 CDK5RAP3Q96JB5 506 aa17.26■□□□□ 0.35
CSNK1D-217ENST00000581241 CASKIN1Q8WXD9 1431 aa17.26■□□□□ 0.35
CSNK1D-217ENST00000581241 TAF3Q5VWG9 929 aa17.26■□□□□ 0.35
CSNK1D-217ENST00000581241 TXLNBQ8N3L3 684 aa17.26■□□□□ 0.35
CSNK1D-217ENST00000581241 KRT85P78386 507 aa17.25■□□□□ 0.35
CSNK1D-217ENST00000581241 GAS2L2Q8NHY3 880 aa17.25■□□□□ 0.35
CSNK1D-217ENST00000581241 ESPNB1AK53 854 aa17.25■□□□□ 0.35
CSNK1D-217ENST00000581241 LRRCC1Q9C099 1032 aa17.25■□□□□ 0.35
CSNK1D-217ENST00000581241 CHD1LQ86WJ1 897 aa17.25■□□□□ 0.35
CSNK1D-217ENST00000581241 MVPQ14764 893 aaKnown RBP17.24■□□□□ 0.35
CSNK1D-217ENST00000581241 WDR63Q8IWG1 891 aa17.24■□□□□ 0.35
CSNK1D-217ENST00000581241 RBM33Q96EV2 1170 aaKnown RBP17.24■□□□□ 0.35
CSNK1D-217ENST00000581241 ZRSR2Q15696 482 aaKnown RBP17.24■□□□□ 0.35
CSNK1D-217ENST00000581241 CCDC181Q5TID7 509 aa17.24■□□□□ 0.35
CSNK1D-217ENST00000581241 CCT4P50991 539 aaKnown RBP17.24■□□□□ 0.35
CSNK1D-217ENST00000581241 TTC39AQ5SRH9 613 aa17.23■□□□□ 0.35
CSNK1D-217ENST00000581241 RAPGEF4Q8WZA2 1011 aa17.23■□□□□ 0.35
CSNK1D-217ENST00000581241 STK3Q13188 491 aa17.22■□□□□ 0.35
CSNK1D-217ENST00000581241 HSP90AB3PQ58FF7 597 aa17.22■□□□□ 0.35
CSNK1D-217ENST00000581241 IQCEQ6IPM2 695 aa17.22■□□□□ 0.35
CSNK1D-217ENST00000581241 SLC3A2P08195 630 aaKnown RBP17.22■□□□□ 0.35
CSNK1D-217ENST00000581241 PRKAR2BP31323 418 aa17.22■□□□□ 0.35
CSNK1D-217ENST00000581241 SRCIN1Q9C0H9 1055 aa17.22■□□□□ 0.35
CSNK1D-217ENST00000581241 LUC7LQ9NQ29 371 aaKnown RBP17.22■□□□□ 0.35
CSNK1D-217ENST00000581241 ME1P48163 572 aa17.21■□□□□ 0.35
CSNK1D-217ENST00000581241 ZSCAN31Q96LW9 406 aaPredicted RBP17.21■□□□□ 0.35
CSNK1D-217ENST00000581241 SYCP1Q15431 976 aa17.21■□□□□ 0.35
CSNK1D-217ENST00000581241 NUP62CLQ9H1M0 184 aa17.21■□□□□ 0.35
CSNK1D-217ENST00000581241 GOLGA6L7A0A1B0GV03 622 aa17.21■□□□□ 0.35
CSNK1D-217ENST00000581241 CCAR1Q8IX12 1150 aaKnown RBP17.21■□□□□ 0.35
CSNK1D-217ENST00000581241 SPATA32Q96LK8 384 aa17.21■□□□□ 0.35
CSNK1D-217ENST00000581241 SYTL4Q96C24 671 aaPredicted RBP17.21■□□□□ 0.34
CSNK1D-217ENST00000581241 FGD5Q6ZNL6 1462 aa17.2■□□□□ 0.34
CSNK1D-217ENST00000581241 ATP2B1P20020 1258 aa17.2■□□□□ 0.34
CSNK1D-217ENST00000581241 STIM1Q13586 685 aa17.2■□□□□ 0.34
CSNK1D-217ENST00000581241 PLCD4Q9BRC7 762 aa17.2■□□□□ 0.34
CSNK1D-217ENST00000581241 LARP1BQ659C4 914 aaKnown RBP17.2■□□□□ 0.34
CSNK1D-217ENST00000581241 ZSCAN30Q86W11 494 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 202 ms