RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 ARHGAP5Q13017 1502 aa5.37□□□□□ -1.55
RTTN-206ENST00000581161 UBR1Q8IWV7 1749 aa5.36□□□□□ -1.55
RTTN-206ENST00000581161 PPIP5K1Q6PFW1 1433 aa5.36□□□□□ -1.55
RTTN-206ENST00000581161 TNNT3P45378 269 aaPredicted RBP5.36□□□□□ -1.55
RTTN-206ENST00000581161 PDE4CQ08493 712 aa5.36□□□□□ -1.55
RTTN-206ENST00000581161 FER1L4A9Z1Z3 1794 aa5.36□□□□□ -1.55
RTTN-206ENST00000581161 CDK12Q9NYV4 1490 aaPredicted RBP5.36□□□□□ -1.55
RTTN-206ENST00000581161 KDM2BQ8NHM5 1336 aa5.35□□□□□ -1.55
RTTN-206ENST00000581161 SCAF11Q99590 1463 aaKnown RBP5.35□□□□□ -1.55
RTTN-206ENST00000581161 C20orf194Q5TEA3 1177 aa5.35□□□□□ -1.55
RTTN-206ENST00000581161 CPSF1Q10570 1443 aaKnown RBP5.35□□□□□ -1.55
RTTN-206ENST00000581161 ASXL2Q76L83 1435 aa5.35□□□□□ -1.55
RTTN-206ENST00000581161 PANK3Q9H999 370 aa5.35□□□□□ -1.55
RTTN-206ENST00000581161 PUS7Q96PZ0 661 aaKnown RBP5.35□□□□□ -1.55
RTTN-206ENST00000581161 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.35□□□□□ -1.55
RTTN-206ENST00000581161 KNSTRNQ9Y448 316 aa5.35□□□□□ -1.55
RTTN-206ENST00000581161 FGD1P98174 961 aa5.34□□□□□ -1.55
RTTN-206ENST00000581161 TPM4P67936 248 aa5.34□□□□□ -1.55
RTTN-206ENST00000581161 FAM161AQ3B820 660 aa5.34□□□□□ -1.55
RTTN-206ENST00000581161 EFCAB2Q5VUJ9 269 aa5.34□□□□□ -1.55
RTTN-206ENST00000581161 CCDC146Q8IYE0 955 aa5.34□□□□□ -1.55
RTTN-206ENST00000581161 FRAT2O75474 233 aaPredicted RBP5.34□□□□□ -1.55
RTTN-206ENST00000581161 BECN1Q14457 450 aa5.34□□□□□ -1.55
RTTN-206ENST00000581161 PEAK1Q9H792 1746 aa5.34□□□□□ -1.55
RTTN-206ENST00000581161 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.34□□□□□ -1.55
RTTN-206ENST00000581161 SLKQ9H2G2 1235 aaPredicted RBP5.34□□□□□ -1.55
RTTN-206ENST00000581161 NPM1P06748 294 aaKnown RBP eCLIP5.34□□□□□ -1.56
RTTN-206ENST00000581161 TMF1P82094 1093 aa5.34□□□□□ -1.56
RTTN-206ENST00000581161 SIPA1L3O60292 1781 aaPredicted RBP5.33□□□□□ -1.56
RTTN-206ENST00000581161 CENPQQ7L2Z9 268 aaPredicted RBP5.33□□□□□ -1.56
RTTN-206ENST00000581161 SPRYD3Q8NCJ5 442 aa5.33□□□□□ -1.56
RTTN-206ENST00000581161 CWC22Q9HCG8 908 aaKnown RBP5.33□□□□□ -1.56
RTTN-206ENST00000581161 USP19O94966 1318 aa5.33□□□□□ -1.56
RTTN-206ENST00000581161 CHGAP10645 457 aaKnown RBP5.33□□□□□ -1.56
RTTN-206ENST00000581161 HNRNPMP52272 730 aaKnown RBP eCLIP5.33□□□□□ -1.56
RTTN-206ENST00000581161 PLEKHH1Q9ULM0 1364 aa5.33□□□□□ -1.56
RTTN-206ENST00000581161 NBPF1Q3BBV0 1214 aa5.33□□□□□ -1.56
RTTN-206ENST00000581161 STK11IPQ8N1F8 1099 aa5.33□□□□□ -1.56
RTTN-206ENST00000581161 PDCL3Q9H2J4 239 aa5.33□□□□□ -1.56
RTTN-206ENST00000581161 ZNF142P52746 1687 aaPredicted RBP5.33□□□□□ -1.56
RTTN-206ENST00000581161 ZMYM3Q14202 1370 aa5.33□□□□□ -1.56
RTTN-206ENST00000581161 SLIT1O75093 1534 aa5.33□□□□□ -1.56
RTTN-206ENST00000581161 HSP90B1P14625 803 aaKnown RBP5.33□□□□□ -1.56
RTTN-206ENST00000581161 ADAMTS8Q9UP79 889 aa5.32□□□□□ -1.56
RTTN-206ENST00000581161 GNL2Q13823 731 aaKnown RBP5.32□□□□□ -1.56
RTTN-206ENST00000581161 NEUROD2Q15784 382 aa5.32□□□□□ -1.56
RTTN-206ENST00000581161 G3V3G9 751 aa5.32□□□□□ -1.56
RTTN-206ENST00000581161 DCAF8Q5TAQ9 597 aa5.32□□□□□ -1.56
RTTN-206ENST00000581161 CD109Q6YHK3 1445 aa5.32□□□□□ -1.56
RTTN-206ENST00000581161 AK7Q96M32 723 aa5.31□□□□□ -1.56
RTTN-206ENST00000581161 CCDC34Q96HJ3 373 aa5.31□□□□□ -1.56
RTTN-206ENST00000581161 NAP1L2Q9ULW6 460 aaPredicted RBP5.31□□□□□ -1.56
RTTN-206ENST00000581161 HTATSF1O43719 755 aaKnown RBP5.31□□□□□ -1.56
RTTN-206ENST00000581161 HMMRO75330 724 aa5.31□□□□□ -1.56
RTTN-206ENST00000581161 DLG5Q8TDM6 1919 aa5.31□□□□□ -1.56
RTTN-206ENST00000581161 STAC3Q96MF2 364 aa5.3□□□□□ -1.56
RTTN-206ENST00000581161 KIF20BQ96Q89 1820 aa5.3□□□□□ -1.56
RTTN-206ENST00000581161 POLR3AO14802 1390 aaPredicted RBP5.3□□□□□ -1.56
RTTN-206ENST00000581161 ALKQ9UM73 1620 aa5.3□□□□□ -1.56
RTTN-206ENST00000581161 VSIG10Q8N0Z9 540 aa5.3□□□□□ -1.56
RTTN-206ENST00000581161 NAP1L5Q96NT1 182 aaPredicted RBP5.3□□□□□ -1.56
RTTN-206ENST00000581161 GZF1Q9H116 711 aaPredicted RBP5.3□□□□□ -1.56
RTTN-206ENST00000581161 COL22A1Q8NFW1 1626 aaPredicted RBP5.29□□□□□ -1.56
RTTN-206ENST00000581161 PIK3R4Q99570 1358 aa5.29□□□□□ -1.56
RTTN-206ENST00000581161 PLCB2Q00722 1185 aa5.29□□□□□ -1.56
RTTN-206ENST00000581161 TCEAL9Q9UHQ7 104 aa5.29□□□□□ -1.56
RTTN-206ENST00000581161 CTDP1Q9Y5B0 961 aaPredicted RBP5.29□□□□□ -1.56
RTTN-206ENST00000581161 A2ML1A8K2U0 1454 aa5.29□□□□□ -1.56
RTTN-206ENST00000581161 DDX60Q8IY21 1712 aaKnown RBP5.29□□□□□ -1.56
RTTN-206ENST00000581161 PPP2R1AP30153 589 aa5.29□□□□□ -1.56
RTTN-206ENST00000581161 RGS12O14924 1447 aa5.29□□□□□ -1.56
RTTN-206ENST00000581161 BCAR3O75815 825 aa5.29□□□□□ -1.56
RTTN-206ENST00000581161 C8orf34Q49A92 452 aa5.29□□□□□ -1.56
RTTN-206ENST00000581161 PTPRUQ92729 1446 aa5.29□□□□□ -1.56
RTTN-206ENST00000581161 COG6Q9Y2V7 657 aa5.28□□□□□ -1.56
RTTN-206ENST00000581161 NCOA3Q9Y6Q9 1424 aa5.28□□□□□ -1.56
RTTN-206ENST00000581161 DRC7Q8IY82 874 aa5.28□□□□□ -1.56
RTTN-206ENST00000581161 RSPH6AQ9H0K4 717 aa5.28□□□□□ -1.56
RTTN-206ENST00000581161 POGKQ9P215 609 aa5.28□□□□□ -1.56
RTTN-206ENST00000581161 APAF1O14727 1248 aa5.28□□□□□ -1.56
RTTN-206ENST00000581161 CARD14Q9BXL6 1004 aa5.28□□□□□ -1.56
RTTN-206ENST00000581161 IBTKQ9P2D0 1353 aaPredicted RBP5.28□□□□□ -1.56
RTTN-206ENST00000581161 OS9Q13438 667 aaPredicted RBP5.28□□□□□ -1.56
RTTN-206ENST00000581161 PAF1Q8N7H5 531 aa5.28□□□□□ -1.56
RTTN-206ENST00000581161 PANK1Q8TE04 598 aa5.27□□□□□ -1.57
RTTN-206ENST00000581161 ADAMTS13Q76LX8 1427 aa5.27□□□□□ -1.57
RTTN-206ENST00000581161 KCNJ4P48050 445 aa5.27□□□□□ -1.57
RTTN-206ENST00000581161 RRP7AQ9Y3A4 280 aaKnown RBP5.27□□□□□ -1.57
RTTN-206ENST00000581161 CENPJQ9HC77 1338 aaPredicted RBP5.27□□□□□ -1.57
RTTN-206ENST00000581161 ABCC6O95255 1503 aa5.27□□□□□ -1.57
RTTN-206ENST00000581161 TRPM3Q9HCF6 1732 aaPredicted RBP5.27□□□□□ -1.57
RTTN-206ENST00000581161 CICQ96RK0 1608 aaPredicted RBP5.27□□□□□ -1.57
RTTN-206ENST00000581161 PATL2C9JE40 543 aaKnown RBP5.27□□□□□ -1.57
RTTN-206ENST00000581161 CDCA8Q53HL2 280 aa5.27□□□□□ -1.57
RTTN-206ENST00000581161 FAM43AQ8N2R8 423 aa5.27□□□□□ -1.57
RTTN-206ENST00000581161 CLUAP1Q96AJ1 413 aa5.27□□□□□ -1.57
RTTN-206ENST00000581161 FAM135BQ49AJ0 1406 aa5.27□□□□□ -1.57
RTTN-206ENST00000581161 SPAG9O60271 1321 aaKnown RBP5.27□□□□□ -1.57
RTTN-206ENST00000581161 GOLGA6L3A6NEY3 463 aa5.26□□□□□ -1.57
RTTN-206ENST00000581161 VPS53Q5VIR6 699 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms