RNA–Protein interactions for RNA: ENST00000581068.5

SKA2-206, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-206ENST00000581068 LRRC7Q96NW7 1537 aa14.89□□□□□ -0.03
SKA2-206ENST00000581068 YTHDC1Q96MU7 727 aaKnown RBP14.89□□□□□ -0.03
SKA2-206ENST00000581068 USP6P35125 1406 aa14.89□□□□□ -0.03
SKA2-206ENST00000581068 TTC21BQ7Z4L5 1316 aa14.89□□□□□ -0.03
SKA2-206ENST00000581068 ESCO1Q5FWF5 840 aa14.88□□□□□ -0.03
SKA2-206ENST00000581068 CADPS2Q86UW7 1296 aa14.88□□□□□ -0.03
SKA2-206ENST00000581068 TTC21AQ8NDW8 1320 aa14.87□□□□□ -0.03
SKA2-206ENST00000581068 NME9Q86XW9 330 aa14.86□□□□□ -0.03
SKA2-206ENST00000581068 FAM9BQ8IZU0 186 aa14.86□□□□□ -0.03
SKA2-206ENST00000581068 PNISRQ8TF01 805 aaKnown RBP14.86□□□□□ -0.03
SKA2-206ENST00000581068 KIF20BQ96Q89 1820 aa14.86□□□□□ -0.03
SKA2-206ENST00000581068 C1orf167Q5SNV9 1468 aa14.86□□□□□ -0.03
SKA2-206ENST00000581068 SSH2Q76I76 1423 aa14.85□□□□□ -0.03
SKA2-206ENST00000581068 TNNT2P45379 298 aaPredicted RBP14.85□□□□□ -0.03
SKA2-206ENST00000581068 COG3Q96JB2 828 aa14.85□□□□□ -0.03
SKA2-206ENST00000581068 ANKRD26Q9UPS8 1709 aa14.85□□□□□ -0.03
SKA2-206ENST00000581068 MST1RQ04912 1400 aa14.84□□□□□ -0.03
SKA2-206ENST00000581068 ORAI2Q96SN7 254 aa14.84□□□□□ -0.03
SKA2-206ENST00000581068 XIRP1Q702N8 1843 aaKnown RBP14.83□□□□□ -0.04
SKA2-206ENST00000581068 NRKQ7Z2Y5 1582 aa14.83□□□□□ -0.04
SKA2-206ENST00000581068 PSME1Q06323 249 aa14.83□□□□□ -0.04
SKA2-206ENST00000581068 ZRANB1Q9UGI0 708 aa14.82□□□□□ -0.04
SKA2-206ENST00000581068 PPP4R3CPQ6ZMV5 832 aa14.81□□□□□ -0.04
SKA2-206ENST00000581068 CFAP53Q96M91 514 aa14.81□□□□□ -0.04
SKA2-206ENST00000581068 KIF1AQ12756 1690 aa14.81□□□□□ -0.04
SKA2-206ENST00000581068 MTHFSP49914 203 aa14.8□□□□□ -0.04
SKA2-206ENST00000581068 USP31Q70CQ4 1352 aa14.8□□□□□ -0.04
SKA2-206ENST00000581068 FOXO3O43524 673 aa14.79□□□□□ -0.04
SKA2-206ENST00000581068 PAK3O75914 559 aaPredicted RBP14.79□□□□□ -0.04
SKA2-206ENST00000581068 KRT28Q7Z3Y7 464 aa14.79□□□□□ -0.04
SKA2-206ENST00000581068 AATKQ6ZMQ8 1374 aa14.78□□□□□ -0.04
SKA2-206ENST00000581068 CENPBP07199 599 aaPredicted RBP14.78□□□□□ -0.04
SKA2-206ENST00000581068 WDR43Q15061 677 aaKnown RBP eCLIP14.78□□□□□ -0.04
SKA2-206ENST00000581068 SLAIN2Q9P270 581 aa14.78□□□□□ -0.04
SKA2-206ENST00000581068 OVOS2A0A0J9YW53 1432 aa14.77□□□□□ -0.04
SKA2-206ENST00000581068 OVOS2Q6IE36 1432 aa14.77□□□□□ -0.04
SKA2-206ENST00000581068 NLRP6P59044 892 aa14.77□□□□□ -0.05
SKA2-206ENST00000581068 ABTB2Q8N961 1025 aa14.77□□□□□ -0.05
SKA2-206ENST00000581068 LTBP4Q8N2S1 1624 aa14.77□□□□□ -0.05
SKA2-206ENST00000581068 INSRP06213 1382 aa14.76□□□□□ -0.05
SKA2-206ENST00000581068 POLKQ9UBT6 870 aa14.76□□□□□ -0.05
SKA2-206ENST00000581068 NPHP3Q7Z494 1330 aa14.75□□□□□ -0.05
SKA2-206ENST00000581068 HNRNPUQ00839 825 aaKnown RBP eCLIP14.75□□□□□ -0.05
SKA2-206ENST00000581068 BRINP3Q76B58 766 aa14.74□□□□□ -0.05
SKA2-206ENST00000581068 PIK3C2AO00443 1686 aa14.74□□□□□ -0.05
SKA2-206ENST00000581068 FBLN1P23142 703 aa14.73□□□□□ -0.05
SKA2-206ENST00000581068 XPCQ01831 940 aaPredicted RBP14.73□□□□□ -0.05
SKA2-206ENST00000581068 ADAMTS8Q9UP79 889 aa14.73□□□□□ -0.05
SKA2-206ENST00000581068 NUDCQ9Y266 331 aa14.73□□□□□ -0.05
SKA2-206ENST00000581068 SBNO1A3KN83 1393 aa14.73□□□□□ -0.05
SKA2-206ENST00000581068 USP54Q70EL1 1684 aa14.72□□□□□ -0.05
SKA2-206ENST00000581068 NUTM2GQ5VZR2 741 aa14.72□□□□□ -0.05
SKA2-206ENST00000581068 SMG6Q86US8 1419 aaKnown RBP14.72□□□□□ -0.05
SKA2-206ENST00000581068 PNPLA6Q8IY17 1366 aa14.72□□□□□ -0.05
SKA2-206ENST00000581068 PPM1GO15355 546 aaPredicted RBP14.71□□□□□ -0.05
SKA2-206ENST00000581068 EMILIN1Q9Y6C2 1016 aa14.71□□□□□ -0.05
SKA2-206ENST00000581068 TRPM3Q9HCF6 1732 aaPredicted RBP14.7□□□□□ -0.06
SKA2-206ENST00000581068 DIAPH1O60610 1272 aaKnown RBP14.7□□□□□ -0.06
SKA2-206ENST00000581068 RRS1Q15050 365 aaKnown RBP14.7□□□□□ -0.06
SKA2-206ENST00000581068 MAP2P11137 1827 aaKnown RBP14.7□□□□□ -0.06
SKA2-206ENST00000581068 LMOD2Q6P5Q4 547 aa14.69□□□□□ -0.06
SKA2-206ENST00000581068 KCNH5Q8NCM2 988 aa14.69□□□□□ -0.06
SKA2-206ENST00000581068 DDX17Q92841 729 aaKnown RBP14.69□□□□□ -0.06
SKA2-206ENST00000581068 COL3A1P02461 1466 aaPredicted RBP14.69□□□□□ -0.06
SKA2-206ENST00000581068 CDK12Q9NYV4 1490 aaPredicted RBP14.69□□□□□ -0.06
SKA2-206ENST00000581068 BLMP54132 1417 aaPredicted RBP14.68□□□□□ -0.06
SKA2-206ENST00000581068 SOX12O15370 315 aa14.68□□□□□ -0.06
SKA2-206ENST00000581068 PXDNQ92626 1479 aa14.68□□□□□ -0.06
SKA2-206ENST00000581068 SHPRHQ149N8 1683 aa14.67□□□□□ -0.06
SKA2-206ENST00000581068 SOS2Q07890 1332 aaPredicted RBP14.66□□□□□ -0.06
SKA2-206ENST00000581068 MAP3K19Q56UN5 1328 aa14.66□□□□□ -0.06
SKA2-206ENST00000581068 SPATA31A3Q5VYP0 1347 aa14.66□□□□□ -0.06
SKA2-206ENST00000581068 ZBED9Q6R2W3 1325 aa14.66□□□□□ -0.06
SKA2-206ENST00000581068 MARF1Q9Y4F3 1742 aaKnown RBP14.66□□□□□ -0.06
SKA2-206ENST00000581068 KIF24Q5T7B8 1368 aa14.66□□□□□ -0.06
SKA2-206ENST00000581068 U2SURPO15042 1029 aaKnown RBP14.66□□□□□ -0.06
SKA2-206ENST00000581068 U2AF1L5P0DN76 240 aaPredicted RBP14.66□□□□□ -0.06
SKA2-206ENST00000581068 AMPHP49418 695 aa14.66□□□□□ -0.06
SKA2-206ENST00000581068 U2AF1Q01081 240 aaKnown RBP eCLIP14.66□□□□□ -0.061e-7■□□□□ 9.5
SKA2-206ENST00000581068 TNS3Q68CZ2 1445 aa14.66□□□□□ -0.06
SKA2-206ENST00000581068 USP19O94966 1318 aa14.66□□□□□ -0.06
SKA2-206ENST00000581068 ALS2Q96Q42 1657 aa14.65□□□□□ -0.06
SKA2-206ENST00000581068 ARHGEF10O15013 1369 aa14.65□□□□□ -0.06
SKA2-206ENST00000581068 IL13P35225 146 aa14.65□□□□□ -0.06
SKA2-206ENST00000581068 FLT4P35916 1363 aa14.64□□□□□ -0.07
SKA2-206ENST00000581068 TOM1O60784 492 aa14.64□□□□□ -0.07
SKA2-206ENST00000581068 GCP02774 474 aa14.64□□□□□ -0.07
SKA2-206ENST00000581068 HOXD11P31277 338 aaPredicted RBP14.64□□□□□ -0.07
SKA2-206ENST00000581068 RUNDC1Q96C34 613 aa14.64□□□□□ -0.07
SKA2-206ENST00000581068 PNNQ9H307 717 aaKnown RBP14.64□□□□□ -0.07
SKA2-206ENST00000581068 SLIT3O75094 1523 aa14.64□□□□□ -0.07
SKA2-206ENST00000581068 CCDC146Q8IYE0 955 aa14.63□□□□□ -0.07
SKA2-206ENST00000581068 HSP90AB2PQ58FF8 381 aa14.62□□□□□ -0.07
SKA2-206ENST00000581068 NGEFQ8N5V2 710 aa14.62□□□□□ -0.07
SKA2-206ENST00000581068 NHSL1Q5SYE7 1610 aa14.62□□□□□ -0.07
SKA2-206ENST00000581068 NFAT5O94916 1531 aa14.61□□□□□ -0.07
SKA2-206ENST00000581068 RTL1A6NKG5 1358 aa14.61□□□□□ -0.07
SKA2-206ENST00000581068 PEAK1Q9H792 1746 aa14.61□□□□□ -0.07
SKA2-206ENST00000581068 FCHSD2O94868 740 aa14.61□□□□□ -0.07
SKA2-206ENST00000581068 HOXC9P31274 260 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms