RNA–Protein interactions for RNA: ENST00000581014.1

CDC42EP4-206, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-206ENST00000581014 GJD4Q96KN9 370 aaPredicted RBP24.24■■□□□ 1.47
CDC42EP4-206ENST00000581014 TONSLQ96HA7 1378 aa24.24■■□□□ 1.47
CDC42EP4-206ENST00000581014 TOPAZ1Q8N9V7 1692 aa24.22■■□□□ 1.47
CDC42EP4-206ENST00000581014 GLI3P10071 1580 aa24.22■■□□□ 1.47
CDC42EP4-206ENST00000581014 PAK3O75914 559 aaPredicted RBP24.22■■□□□ 1.47
CDC42EP4-206ENST00000581014 CABP2Q9NPB3 220 aa24.22■■□□□ 1.47
CDC42EP4-206ENST00000581014 BRWD3Q6RI45 1802 aa24.21■■□□□ 1.47
CDC42EP4-206ENST00000581014 CRYBG1Q9Y4K1 1723 aa24.21■■□□□ 1.47
CDC42EP4-206ENST00000581014 EVC2Q86UK5 1308 aa24.21■■□□□ 1.47
CDC42EP4-206ENST00000581014 FAM83GA6ND36 823 aa24.21■■□□□ 1.47
CDC42EP4-206ENST00000581014 BRD4O60885 1362 aaPredicted RBP24.2■■□□□ 1.46
CDC42EP4-206ENST00000581014 ATAD2Q6PL18 1390 aa24.2■■□□□ 1.46
CDC42EP4-206ENST00000581014 PPIP5K1Q6PFW1 1433 aa24.19■■□□□ 1.46
CDC42EP4-206ENST00000581014 PLEKHG5O94827 1062 aa24.19■■□□□ 1.46
CDC42EP4-206ENST00000581014 VPS72Q15906 364 aa24.19■■□□□ 1.46
CDC42EP4-206ENST00000581014 NRAPQ86VF7 1730 aa24.18■■□□□ 1.46
CDC42EP4-206ENST00000581014 SBNO2Q9Y2G9 1366 aa24.18■■□□□ 1.46
CDC42EP4-206ENST00000581014 QRICH2Q9H0J4 1663 aa24.18■■□□□ 1.46
CDC42EP4-206ENST00000581014 RALGAPBQ86X10 1494 aa24.17■■□□□ 1.46
CDC42EP4-206ENST00000581014 CARD11Q9BXL7 1154 aa24.16■■□□□ 1.46
CDC42EP4-206ENST00000581014 CABP1Q9NZU7 370 aa24.16■■□□□ 1.46
CDC42EP4-206ENST00000581014 EP400Q96L91 3159 aa24.15■■□□□ 1.46
CDC42EP4-206ENST00000581014 ONECUT3O60422 494 aaPredicted RBP24.14■■□□□ 1.45
CDC42EP4-206ENST00000581014 COL14A1Q05707 1796 aaKnown RBP24.13■■□□□ 1.45
CDC42EP4-206ENST00000581014 PHRF1Q9P1Y6 1649 aaKnown RBP24.12■■□□□ 1.45
CDC42EP4-206ENST00000581014 ABTB2Q8N961 1025 aa24.11■■□□□ 1.45
CDC42EP4-206ENST00000581014 BTG4Q9NY30 223 aa24.11■■□□□ 1.45
CDC42EP4-206ENST00000581014 USP19O94966 1318 aa24.1■■□□□ 1.45
CDC42EP4-206ENST00000581014 PRDM11Q9NQV5 511 aa24.1■■□□□ 1.45
CDC42EP4-206ENST00000581014 USP6P35125 1406 aa24.1■■□□□ 1.45
CDC42EP4-206ENST00000581014 SSH2Q76I76 1423 aa24.1■■□□□ 1.45
CDC42EP4-206ENST00000581014 ZNF692Q9BU19 519 aaPredicted RBP24.09■■□□□ 1.45
CDC42EP4-206ENST00000581014 NLRP13Q86W25 1043 aa24.08■■□□□ 1.45
CDC42EP4-206ENST00000581014 CLSPNQ9HAW4 1339 aa24.08■■□□□ 1.44
CDC42EP4-206ENST00000581014 KIAA0232Q92628 1395 aa24.07■■□□□ 1.44
CDC42EP4-206ENST00000581014 NUTM2GQ5VZR2 741 aa24.07■■□□□ 1.44
CDC42EP4-206ENST00000581014 CPDO75976 1380 aa24.06■■□□□ 1.44
CDC42EP4-206ENST00000581014 PUS7Q96PZ0 661 aaKnown RBP24.06■■□□□ 1.44
CDC42EP4-206ENST00000581014 TIMELESSQ9UNS1 1208 aa24.06■■□□□ 1.44
CDC42EP4-206ENST00000581014 SEPT12Q8IYM1 358 aa24.04■■□□□ 1.44
CDC42EP4-206ENST00000581014 CPSF1Q10570 1443 aaKnown RBP24.03■■□□□ 1.44
CDC42EP4-206ENST00000581014 GCP02774 474 aa24.03■■□□□ 1.44
CDC42EP4-206ENST00000581014 CCDC9Q9Y3X0 531 aaKnown RBP24.03■■□□□ 1.44
CDC42EP4-206ENST00000581014 SPATA31A5Q5VU36 1347 aa24.03■■□□□ 1.44
CDC42EP4-206ENST00000581014 SPATA31A7Q8IWB4 1347 aa24.03■■□□□ 1.44
CDC42EP4-206ENST00000581014 SLC24A1O60721 1099 aa24.02■■□□□ 1.44
CDC42EP4-206ENST00000581014 ZC3H6P61129 1189 aaKnown RBP24.02■■□□□ 1.44
CDC42EP4-206ENST00000581014 CCDC125Q86Z20 511 aa24.01■■□□□ 1.43
CDC42EP4-206ENST00000581014 CHRNA2Q15822 529 aa24■■□□□ 1.43
CDC42EP4-206ENST00000581014 NLRP6P59044 892 aa23.99■■□□□ 1.43
CDC42EP4-206ENST00000581014 TESK2Q96S53 571 aa23.99■■□□□ 1.43
CDC42EP4-206ENST00000581014 TTC21BQ7Z4L5 1316 aa23.99■■□□□ 1.43
CDC42EP4-206ENST00000581014 TTC21AQ8NDW8 1320 aa23.99■■□□□ 1.43
CDC42EP4-206ENST00000581014 NRKQ7Z2Y5 1582 aa23.99■■□□□ 1.43
CDC42EP4-206ENST00000581014 ST20-MTHFSA0A0A6YYL1 179 aa23.96■■□□□ 1.43
CDC42EP4-206ENST00000581014 SLIT3O75094 1523 aa23.95■■□□□ 1.43
CDC42EP4-206ENST00000581014 SPATA31A1Q5TZJ5 1347 aa23.95■■□□□ 1.42
CDC42EP4-206ENST00000581014 FAM98CQ17RN3 349 aaKnown RBP23.95■■□□□ 1.42
CDC42EP4-206ENST00000581014 KRT27Q7Z3Y8 459 aa23.95■■□□□ 1.42
CDC42EP4-206ENST00000581014 PCGF6Q9BYE7 350 aa23.95■■□□□ 1.42
CDC42EP4-206ENST00000581014 THSD7AQ9UPZ6 1657 aa23.95■■□□□ 1.42
CDC42EP4-206ENST00000581014 BLMP54132 1417 aaPredicted RBP23.94■■□□□ 1.42
CDC42EP4-206ENST00000581014 KTN1Q86UP2 1357 aaKnown RBP23.94■■□□□ 1.42
CDC42EP4-206ENST00000581014 CD163L1Q9NR16 1453 aa23.93■■□□□ 1.42
CDC42EP4-206ENST00000581014 CAMTA1Q9Y6Y1 1673 aa23.92■■□□□ 1.42
CDC42EP4-206ENST00000581014 AATKQ6ZMQ8 1374 aa23.92■■□□□ 1.42
CDC42EP4-206ENST00000581014 A0A0G2JS52 829 aa23.92■■□□□ 1.42
CDC42EP4-206ENST00000581014 MYT1Q01538 1121 aa23.92■■□□□ 1.42
CDC42EP4-206ENST00000581014 EVA1CP58658 441 aa23.91■■□□□ 1.42
CDC42EP4-206ENST00000581014 KCNH5Q8NCM2 988 aa23.91■■□□□ 1.42
CDC42EP4-206ENST00000581014 SLC12A5Q9H2X9 1139 aa23.91■■□□□ 1.42
CDC42EP4-206ENST00000581014 STRN4Q9NRL3 753 aa23.91■■□□□ 1.42
CDC42EP4-206ENST00000581014 RGPD1P0DJD0 1748 aa23.9■■□□□ 1.42
CDC42EP4-206ENST00000581014 PIK3C2AO00443 1686 aa23.9■■□□□ 1.42
CDC42EP4-206ENST00000581014 LMO7Q8WWI1 1683 aa23.9■■□□□ 1.42
CDC42EP4-206ENST00000581014 USP31Q70CQ4 1352 aa23.9■■□□□ 1.42
CDC42EP4-206ENST00000581014 NINLQ9Y2I6 1382 aa23.9■■□□□ 1.42
CDC42EP4-206ENST00000581014 AKAP12Q02952 1782 aa23.89■■□□□ 1.42
CDC42EP4-206ENST00000581014 BARGINQ6ZT62 677 aa23.89■■□□□ 1.41
CDC42EP4-206ENST00000581014 TMC1Q8TDI8 760 aa23.89■■□□□ 1.41
CDC42EP4-206ENST00000581014 TERF2IPQ9NYB0 399 aa23.89■■□□□ 1.41
CDC42EP4-206ENST00000581014 HDGFL2Q7Z4V5 671 aaPredicted RBP23.88■■□□□ 1.41
CDC42EP4-206ENST00000581014 USP47Q96K76 1375 aa23.88■■□□□ 1.41
CDC42EP4-206ENST00000581014 LARP1Q6PKG0 1096 aaKnown RBP23.87■■□□□ 1.41
CDC42EP4-206ENST00000581014 ARHGEF25Q86VW2 580 aa23.87■■□□□ 1.41
CDC42EP4-206ENST00000581014 THRAP3Q9Y2W1 955 aaKnown RBP23.86■■□□□ 1.41
CDC42EP4-206ENST00000581014 COL5A2P05997 1499 aaPredicted RBP23.86■■□□□ 1.41
CDC42EP4-206ENST00000581014 TNS1Q9HBL0 1735 aaKnown RBP23.85■■□□□ 1.41
CDC42EP4-206ENST00000581014 EDC4Q6P2E9 1401 aaKnown RBP23.84■■□□□ 1.41
CDC42EP4-206ENST00000581014 A0A1W2PP64 1363 aa23.84■■□□□ 1.41
CDC42EP4-206ENST00000581014 TCP11L2Q8N4U5 519 aa23.84■■□□□ 1.41
CDC42EP4-206ENST00000581014 MON2Q7Z3U7 1717 aa23.84■■□□□ 1.41
CDC42EP4-206ENST00000581014 TMF1P82094 1093 aa23.83■■□□□ 1.41
CDC42EP4-206ENST00000581014 SF3B2Q13435 895 aaKnown RBP23.83■■□□□ 1.41
CDC42EP4-206ENST00000581014 ZRANB1Q9UGI0 708 aa23.83■■□□□ 1.41
CDC42EP4-206ENST00000581014 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.82■■□□□ 1.4
CDC42EP4-206ENST00000581014 DEFB132Q7Z7B7 95 aa23.81■■□□□ 1.4
CDC42EP4-206ENST00000581014 AXIN2Q9Y2T1 843 aa23.81■■□□□ 1.4
CDC42EP4-206ENST00000581014 CRB1P82279 1406 aa23.81■■□□□ 1.4
CDC42EP4-206ENST00000581014 NME9Q86XW9 330 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms