RNA–Protein interactions for RNA: ENST00000580573.1

KPNB1-210, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-210ENST00000580573 RBM42Q9BTD8 480 aaKnown RBP10.91□□□□□ -0.66
KPNB1-210ENST00000580573 NSD3Q9BZ95 1437 aa10.91□□□□□ -0.66
KPNB1-210ENST00000580573 PRR36Q9H6K5 1346 aa10.9□□□□□ -0.66
KPNB1-210ENST00000580573 SLC12A5Q9H2X9 1139 aa10.9□□□□□ -0.66
KPNB1-210ENST00000580573 PPIP5K1Q6PFW1 1433 aa10.9□□□□□ -0.66
KPNB1-210ENST00000580573 BRD4O60885 1362 aaPredicted RBP10.9□□□□□ -0.67
KPNB1-210ENST00000580573 SRPK2P78362 688 aaKnown RBP10.89□□□□□ -0.67
KPNB1-210ENST00000580573 DCCP43146 1447 aa10.89□□□□□ -0.67
KPNB1-210ENST00000580573 MYBBP1AQ9BQG0 1328 aaKnown RBP10.88□□□□□ -0.67
KPNB1-210ENST00000580573 EDC4Q6P2E9 1401 aaKnown RBP10.88□□□□□ -0.67
KPNB1-210ENST00000580573 KNSTRNQ9Y448 316 aa10.88□□□□□ -0.67
KPNB1-210ENST00000580573 MARF1Q9Y4F3 1742 aaKnown RBP10.88□□□□□ -0.67
KPNB1-210ENST00000580573 POLR3AO14802 1390 aaPredicted RBP10.88□□□□□ -0.67
KPNB1-210ENST00000580573 SSH2Q76I76 1423 aa10.87□□□□□ -0.67
KPNB1-210ENST00000580573 PLEKHG3A1L390 1219 aa10.87□□□□□ -0.67
KPNB1-210ENST00000580573 HSPA2P54652 639 aa10.87□□□□□ -0.67
KPNB1-210ENST00000580573 NUDT16Q96DE0 195 aaKnown RBP10.87□□□□□ -0.67
KPNB1-210ENST00000580573 CCDC61Q9Y6R9 512 aa10.87□□□□□ -0.67
KPNB1-210ENST00000580573 KIF1AQ12756 1690 aa10.87□□□□□ -0.67
KPNB1-210ENST00000580573 LRRC7Q96NW7 1537 aa10.87□□□□□ -0.67
KPNB1-210ENST00000580573 SHPRHQ149N8 1683 aa10.86□□□□□ -0.67
KPNB1-210ENST00000580573 PLCD3Q8N3E9 789 aa10.86□□□□□ -0.67
KPNB1-210ENST00000580573 TERF2IPQ9NYB0 399 aa10.86□□□□□ -0.67
KPNB1-210ENST00000580573 CGNL1Q0VF96 1302 aa10.85□□□□□ -0.67
KPNB1-210ENST00000580573 CCDC184Q52MB2 194 aa10.85□□□□□ -0.67
KPNB1-210ENST00000580573 NLRP13Q86W25 1043 aa10.85□□□□□ -0.67
KPNB1-210ENST00000580573 TMC1Q8TDI8 760 aa10.85□□□□□ -0.67
KPNB1-210ENST00000580573 INSRP06213 1382 aa10.85□□□□□ -0.67
KPNB1-210ENST00000580573 USP6P35125 1406 aa10.84□□□□□ -0.67
KPNB1-210ENST00000580573 KLHL34Q8N239 644 aa10.84□□□□□ -0.67
KPNB1-210ENST00000580573 CABP1Q9NZU7 370 aa10.84□□□□□ -0.67
KPNB1-210ENST00000580573 PIK3C2AO00443 1686 aa10.84□□□□□ -0.67
KPNB1-210ENST00000580573 TRPM3Q9HCF6 1732 aaPredicted RBP10.84□□□□□ -0.67
KPNB1-210ENST00000580573 AKT1S1Q96B36 256 aa10.83□□□□□ -0.68
KPNB1-210ENST00000580573 MAP2P11137 1827 aaKnown RBP10.83□□□□□ -0.68
KPNB1-210ENST00000580573 CC2D1BQ5T0F9 858 aaKnown RBP10.82□□□□□ -0.68
KPNB1-210ENST00000580573 HDGFL2Q7Z4V5 671 aaPredicted RBP10.82□□□□□ -0.68
KPNB1-210ENST00000580573 SMG6Q86US8 1419 aaKnown RBP10.82□□□□□ -0.68
KPNB1-210ENST00000580573 TMEM94Q12767 1356 aa10.81□□□□□ -0.68
KPNB1-210ENST00000580573 PPP2R1AP30153 589 aa10.81□□□□□ -0.68
KPNB1-210ENST00000580573 SPOCK2Q92563 424 aa10.81□□□□□ -0.68
KPNB1-210ENST00000580573 MRS2Q9HD23 443 aa10.81□□□□□ -0.68
KPNB1-210ENST00000580573 OVOS2A0A0J9YW53 1432 aa10.81□□□□□ -0.68
KPNB1-210ENST00000580573 MST1RQ04912 1400 aa10.81□□□□□ -0.68
KPNB1-210ENST00000580573 OVOS2Q6IE36 1432 aa10.81□□□□□ -0.68
KPNB1-210ENST00000580573 FYB1O15117 783 aa10.8□□□□□ -0.68
KPNB1-210ENST00000580573 PLEKHG5O94827 1062 aa10.8□□□□□ -0.68
KPNB1-210ENST00000580573 PNISRQ8TF01 805 aaKnown RBP10.8□□□□□ -0.68
KPNB1-210ENST00000580573 ACEP12821 1306 aa10.8□□□□□ -0.68
KPNB1-210ENST00000580573 COL3A1P02461 1466 aaPredicted RBP10.8□□□□□ -0.68
KPNB1-210ENST00000580573 ALS2Q96Q42 1657 aa10.79□□□□□ -0.68
KPNB1-210ENST00000580573 LTBP4Q8N2S1 1624 aa10.79□□□□□ -0.68
KPNB1-210ENST00000580573 PHRF1Q9P1Y6 1649 aaKnown RBP10.79□□□□□ -0.68
KPNB1-210ENST00000580573 C1orf167Q5SNV9 1468 aa10.79□□□□□ -0.68
KPNB1-210ENST00000580573 USP31Q70CQ4 1352 aa10.78□□□□□ -0.68
KPNB1-210ENST00000580573 BLMP54132 1417 aaPredicted RBP10.78□□□□□ -0.68
KPNB1-210ENST00000580573 C19orf44Q9H6X5 657 aa10.78□□□□□ -0.68
KPNB1-210ENST00000580573 AATKQ6ZMQ8 1374 aa10.77□□□□□ -0.68
KPNB1-210ENST00000580573 PROSER2Q86WR7 435 aaPredicted RBP10.77□□□□□ -0.69
KPNB1-210ENST00000580573 SPDYE1Q8NFV5 336 aaPredicted RBP10.77□□□□□ -0.69
KPNB1-210ENST00000580573 CRYBG1Q9Y4K1 1723 aa10.77□□□□□ -0.69
KPNB1-210ENST00000580573 TTC21AQ8NDW8 1320 aa10.77□□□□□ -0.69
KPNB1-210ENST00000580573 PNPLA6Q8IY17 1366 aa10.77□□□□□ -0.69
KPNB1-210ENST00000580573 CDK12Q9NYV4 1490 aaPredicted RBP10.76□□□□□ -0.69
KPNB1-210ENST00000580573 ZBTB47Q9UFB7 747 aaPredicted RBP10.76□□□□□ -0.69
KPNB1-210ENST00000580573 TTC21BQ7Z4L5 1316 aa10.76□□□□□ -0.69
KPNB1-210ENST00000580573 NHSL1Q5SYE7 1610 aa10.76□□□□□ -0.69
KPNB1-210ENST00000580573 PEAK1Q9H792 1746 aa10.75□□□□□ -0.69
KPNB1-210ENST00000580573 MORC1Q86VD1 984 aa10.75□□□□□ -0.69
KPNB1-210ENST00000580573 ZNF335Q9H4Z2 1342 aaPredicted RBP10.75□□□□□ -0.69
KPNB1-210ENST00000580573 PHF8Q9UPP1 1060 aa10.74□□□□□ -0.69
KPNB1-210ENST00000580573 RGPD1P0DJD0 1748 aa10.74□□□□□ -0.69
KPNB1-210ENST00000580573 LTN1O94822 1766 aa10.74□□□□□ -0.69
KPNB1-210ENST00000580573 MSH6P52701 1360 aa10.74□□□□□ -0.69
KPNB1-210ENST00000580573 SLIT3O75094 1523 aa10.74□□□□□ -0.69
KPNB1-210ENST00000580573 RBM33Q96EV2 1170 aaKnown RBP10.73□□□□□ -0.69
KPNB1-210ENST00000580573 GGNBP2Q9H3C7 697 aa10.73□□□□□ -0.69
KPNB1-210ENST00000580573 PXDNQ92626 1479 aa10.73□□□□□ -0.69
KPNB1-210ENST00000580573 NFAT5O94916 1531 aa10.73□□□□□ -0.69
KPNB1-210ENST00000580573 MED1Q15648 1581 aaPredicted RBP10.73□□□□□ -0.69
KPNB1-210ENST00000580573 NUTM2FA1L443 756 aa10.72□□□□□ -0.69
KPNB1-210ENST00000580573 CADPS2Q86UW7 1296 aa10.72□□□□□ -0.69
KPNB1-210ENST00000580573 NME9Q86XW9 330 aa10.72□□□□□ -0.69
KPNB1-210ENST00000580573 CNGB1Q14028 1251 aaPredicted RBP10.71□□□□□ -0.69
KPNB1-210ENST00000580573 PMFBP1Q8TBY8 1022 aa10.71□□□□□ -0.69
KPNB1-210ENST00000580573 YTHDC1Q96MU7 727 aaKnown RBP10.71□□□□□ -0.69
KPNB1-210ENST00000580573 IQSEC2Q5JU85 1478 aa10.7□□□□□ -0.7
KPNB1-210ENST00000580573 KIF24Q5T7B8 1368 aa10.7□□□□□ -0.7
KPNB1-210ENST00000580573 ZBED9Q6R2W3 1325 aa10.7□□□□□ -0.7
KPNB1-210ENST00000580573 MTHFSP49914 203 aa10.7□□□□□ -0.7
KPNB1-210ENST00000580573 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.7□□□□□ -0.7
KPNB1-210ENST00000580573 NGDNQ8NEJ9 315 aaKnown RBP10.7□□□□□ -0.7
KPNB1-210ENST00000580573 ABCA3Q99758 1704 aa10.7□□□□□ -0.7
KPNB1-210ENST00000580573 CENPBP07199 599 aaPredicted RBP10.69□□□□□ -0.7
KPNB1-210ENST00000580573 ATF3P18847 181 aa10.69□□□□□ -0.7
KPNB1-210ENST00000580573 C14orf37Q86TY3 774 aa10.69□□□□□ -0.7
KPNB1-210ENST00000580573 REM2Q8IYK8 340 aaPredicted RBP10.69□□□□□ -0.7
KPNB1-210ENST00000580573 FAM9BQ8IZU0 186 aa10.69□□□□□ -0.7
KPNB1-210ENST00000580573 COG3Q96JB2 828 aa10.69□□□□□ -0.7
KPNB1-210ENST00000580573 ORAI2Q96SN7 254 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms