RNA–Protein interactions for RNA: ENST00000580508.1

RBFOX3-204, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-204ENST00000580508 KIAA1210Q9ULL0 1709 aa31.52■■■□□ 2.64
RBFOX3-204ENST00000580508 CCDC9Q9Y3X0 531 aaKnown RBP31.49■■■□□ 2.63
RBFOX3-204ENST00000580508 NGDNQ8NEJ9 315 aaKnown RBP31.48■■■□□ 2.63
RBFOX3-204ENST00000580508 BTG4Q9NY30 223 aa31.47■■■□□ 2.63
RBFOX3-204ENST00000580508 NUDT16Q96DE0 195 aaKnown RBP31.46■■■□□ 2.63
RBFOX3-204ENST00000580508 TOPAZ1Q8N9V7 1692 aa31.45■■■□□ 2.63
RBFOX3-204ENST00000580508 KRT27Q7Z3Y8 459 aa31.45■■■□□ 2.63
RBFOX3-204ENST00000580508 DEFB132Q7Z7B7 95 aa31.42■■■□□ 2.62
RBFOX3-204ENST00000580508 PHRF1Q9P1Y6 1649 aaKnown RBP31.4■■■□□ 2.62
RBFOX3-204ENST00000580508 PAK3O75914 559 aaPredicted RBP31.4■■■□□ 2.62
RBFOX3-204ENST00000580508 CDK19Q9BWU1 502 aa31.4■■■□□ 2.62
RBFOX3-204ENST00000580508 POLR3AO14802 1390 aaPredicted RBP31.4■■■□□ 2.62
RBFOX3-204ENST00000580508 FAM98CQ17RN3 349 aaKnown RBP31.39■■■□□ 2.62
RBFOX3-204ENST00000580508 SPATA31A5Q5VU36 1347 aa31.38■■■□□ 2.61
RBFOX3-204ENST00000580508 SPATA31A7Q8IWB4 1347 aa31.38■■■□□ 2.61
RBFOX3-204ENST00000580508 THSD7AQ9UPZ6 1657 aa31.37■■■□□ 2.61
RBFOX3-204ENST00000580508 SF3B2Q13435 895 aaKnown RBP31.36■■■□□ 2.61
RBFOX3-204ENST00000580508 PRDM11Q9NQV5 511 aa31.35■■■□□ 2.61
RBFOX3-204ENST00000580508 NBPF1Q3BBV0 1214 aa31.34■■■□□ 2.61
RBFOX3-204ENST00000580508 CCDC61Q9Y6R9 512 aa31.34■■■□□ 2.61
RBFOX3-204ENST00000580508 KIAA0232Q92628 1395 aa31.33■■■□□ 2.61
RBFOX3-204ENST00000580508 PLEKHG3A1L390 1219 aa31.33■■■□□ 2.61
RBFOX3-204ENST00000580508 ACEP12821 1306 aa31.32■■■□□ 2.6
RBFOX3-204ENST00000580508 A0A0G2JS52 829 aa31.32■■■□□ 2.6
RBFOX3-204ENST00000580508 MYT1Q01538 1121 aa31.32■■■□□ 2.6
RBFOX3-204ENST00000580508 NBPF8Q3BBV2 869 aa31.31■■■□□ 2.6
RBFOX3-204ENST00000580508 RGPD1P0DJD0 1748 aa31.29■■■□□ 2.6
RBFOX3-204ENST00000580508 SPATA31A1Q5TZJ5 1347 aa31.26■■■□□ 2.6
RBFOX3-204ENST00000580508 NRKQ7Z2Y5 1582 aa31.26■■■□□ 2.6
RBFOX3-204ENST00000580508 CHRNA2Q15822 529 aa31.26■■■□□ 2.59
RBFOX3-204ENST00000580508 BAG6P46379 1132 aa31.24■■■□□ 2.59
RBFOX3-204ENST00000580508 NUTM2GQ5VZR2 741 aa31.24■■■□□ 2.59
RBFOX3-204ENST00000580508 ZC3H6P61129 1189 aaKnown RBP31.23■■■□□ 2.59
RBFOX3-204ENST00000580508 QRICH2Q9H0J4 1663 aa31.22■■■□□ 2.59
RBFOX3-204ENST00000580508 TNS1Q9HBL0 1735 aaKnown RBP31.22■■■□□ 2.59
RBFOX3-204ENST00000580508 FAM182BQ5T319 152 aa31.22■■■□□ 2.59
RBFOX3-204ENST00000580508 LMO7Q8WWI1 1683 aa31.22■■■□□ 2.59
RBFOX3-204ENST00000580508 USP19O94966 1318 aa31.22■■■□□ 2.59
RBFOX3-204ENST00000580508 CENPJQ9HC77 1338 aaPredicted RBP31.22■■■□□ 2.59
RBFOX3-204ENST00000580508 DISP2A7MBM2 1401 aa31.2■■■□□ 2.59
RBFOX3-204ENST00000580508 PPIP5K1Q6PFW1 1433 aa31.2■■■□□ 2.59
RBFOX3-204ENST00000580508 CAMTA1Q9Y6Y1 1673 aa31.19■■■□□ 2.58
RBFOX3-204ENST00000580508 CPDO75976 1380 aa31.19■■■□□ 2.58
RBFOX3-204ENST00000580508 ABTB2Q8N961 1025 aa31.19■■■□□ 2.58
RBFOX3-204ENST00000580508 LRP5O75197 1615 aa31.19■■■□□ 2.58
RBFOX3-204ENST00000580508 SSH2Q76I76 1423 aa31.18■■■□□ 2.58
RBFOX3-204ENST00000580508 STRN4Q9NRL3 753 aa31.18■■■□□ 2.58
RBFOX3-204ENST00000580508 SRPK2P78362 688 aaKnown RBP31.17■■■□□ 2.58
RBFOX3-204ENST00000580508 BRD4O60885 1362 aaPredicted RBP31.16■■■□□ 2.58
RBFOX3-204ENST00000580508 CABP2Q9NPB3 220 aa31.15■■■□□ 2.58
RBFOX3-204ENST00000580508 EN1Q05925 392 aaPredicted RBP31.14■■■□□ 2.58
RBFOX3-204ENST00000580508 BARGINQ6ZT62 677 aa31.13■■■□□ 2.57
RBFOX3-204ENST00000580508 L3MBTL2Q969R5 705 aa31.13■■■□□ 2.57
RBFOX3-204ENST00000580508 TRPM1Q7Z4N2 1603 aa31.13■■■□□ 2.57
RBFOX3-204ENST00000580508 NLRP13Q86W25 1043 aa31.12■■■□□ 2.57
RBFOX3-204ENST00000580508 GCP02774 474 aa31.1■■■□□ 2.57
RBFOX3-204ENST00000580508 EVA1CP58658 441 aa31.1■■■□□ 2.57
RBFOX3-204ENST00000580508 USP6P35125 1406 aa31.09■■■□□ 2.57
RBFOX3-204ENST00000580508 LARP1Q6PKG0 1096 aaKnown RBP31.09■■■□□ 2.57
RBFOX3-204ENST00000580508 FAM196AQ6ZSG2 479 aa31.09■■■□□ 2.57
RBFOX3-204ENST00000580508 PSDA5PKW4 1024 aaPredicted RBP31.08■■■□□ 2.57
RBFOX3-204ENST00000580508 USP35Q9P2H5 1018 aa31.08■■■□□ 2.57
RBFOX3-204ENST00000580508 CABP1Q9NZU7 370 aa31.07■■■□□ 2.56
RBFOX3-204ENST00000580508 SLIT3O75094 1523 aa31.06■■■□□ 2.56
RBFOX3-204ENST00000580508 COL5A2P05997 1499 aaPredicted RBP31.06■■■□□ 2.56
RBFOX3-204ENST00000580508 TCP11L2Q8N4U5 519 aa31.05■■■□□ 2.56
RBFOX3-204ENST00000580508 PARP4Q9UKK3 1724 aaKnown RBP31.04■■■□□ 2.56
RBFOX3-204ENST00000580508 TRIM37O94972 964 aa31.03■■■□□ 2.56
RBFOX3-204ENST00000580508 CAMKK2Q96RR4 588 aa31.03■■■□□ 2.56
RBFOX3-204ENST00000580508 SIN3AQ96ST3 1273 aa31.03■■■□□ 2.56
RBFOX3-204ENST00000580508 PIK3C2AO00443 1686 aa31.03■■■□□ 2.56
RBFOX3-204ENST00000580508 EZH2Q15910 746 aaKnown RBP31.02■■■□□ 2.56
RBFOX3-204ENST00000580508 THRAP3Q9Y2W1 955 aaKnown RBP31.02■■■□□ 2.56
RBFOX3-204ENST00000580508 EVC2Q86UK5 1308 aa31■■■□□ 2.55
RBFOX3-204ENST00000580508 COL18A1P39060 1754 aa31■■■□□ 2.55
RBFOX3-204ENST00000580508 NLRP6P59044 892 aa30.99■■■□□ 2.55
RBFOX3-204ENST00000580508 PDE3BQ13370 1112 aa30.99■■■□□ 2.55
RBFOX3-204ENST00000580508 AATKQ6ZMQ8 1374 aa30.99■■■□□ 2.55
RBFOX3-204ENST00000580508 PARD3Q8TEW0 1356 aa30.99■■■□□ 2.55
RBFOX3-204ENST00000580508 AKAP12Q02952 1782 aa30.99■■■□□ 2.55
RBFOX3-204ENST00000580508 RREB1Q92766 1687 aa30.98■■■□□ 2.55
RBFOX3-204ENST00000580508 CRB1P82279 1406 aa30.98■■■□□ 2.55
RBFOX3-204ENST00000580508 R3HDM1Q15032 1099 aaKnown RBP30.96■■■□□ 2.55
RBFOX3-204ENST00000580508 ROCK2O75116 1388 aaKnown RBP30.95■■■□□ 2.55
RBFOX3-204ENST00000580508 APBA3O96018 575 aa30.95■■■□□ 2.55
RBFOX3-204ENST00000580508 NUP188Q5SRE5 1749 aa30.93■■■□□ 2.54
RBFOX3-204ENST00000580508 PEAK1Q9H792 1746 aa30.93■■■□□ 2.54
RBFOX3-204ENST00000580508 ZNF692Q9BU19 519 aaPredicted RBP30.91■■■□□ 2.54
RBFOX3-204ENST00000580508 NEUROD1Q13562 356 aa30.9■■■□□ 2.54
RBFOX3-204ENST00000580508 TTC21BQ7Z4L5 1316 aa30.9■■■□□ 2.54
RBFOX3-204ENST00000580508 LRRC37A3O60309 1634 aa30.9■■■□□ 2.54
RBFOX3-204ENST00000580508 WNK3Q9BYP7 1800 aa30.89■■■□□ 2.54
RBFOX3-204ENST00000580508 CPSF1Q10570 1443 aaKnown RBP30.89■■■□□ 2.53
RBFOX3-204ENST00000580508 SBF2Q86WG5 1849 aa30.88■■■□□ 2.53
RBFOX3-204ENST00000580508 RGPD5Q99666 1765 aa30.87■■■□□ 2.53
RBFOX3-204ENST00000580508 AXIN2Q9Y2T1 843 aa30.87■■■□□ 2.53
RBFOX3-204ENST00000580508 ZBTB7CA1YPR0 619 aa30.86■■■□□ 2.53
RBFOX3-204ENST00000580508 C11orf95C9JLR9 678 aaPredicted RBP30.86■■■□□ 2.53
RBFOX3-204ENST00000580508 ARHGEF25Q86VW2 580 aa30.86■■■□□ 2.53
RBFOX3-204ENST00000580508 MON2Q7Z3U7 1717 aa30.85■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms