RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 A0A0G2JS52 829 aa19.48■□□□□ 0.71
TRAF4-214ENST00000580073 MYT1Q01538 1121 aa19.48■□□□□ 0.71
TRAF4-214ENST00000580073 NGDNQ8NEJ9 315 aaKnown RBP19.48■□□□□ 0.71
TRAF4-214ENST00000580073 HIRIP3Q9BW71 556 aaPredicted RBP19.48■□□□□ 0.71
TRAF4-214ENST00000580073 KDM2AQ9Y2K7 1162 aa19.48■□□□□ 0.71
TRAF4-214ENST00000580073 THSD7AQ9UPZ6 1657 aa19.48■□□□□ 0.71
TRAF4-214ENST00000580073 PLEKHG5O94827 1062 aa19.47■□□□□ 0.71
TRAF4-214ENST00000580073 KRT27Q7Z3Y8 459 aa19.47■□□□□ 0.71
TRAF4-214ENST00000580073 ONECUT3O60422 494 aaPredicted RBP19.46■□□□□ 0.71
TRAF4-214ENST00000580073 PRR36Q9H6K5 1346 aa19.45■□□□□ 0.7
TRAF4-214ENST00000580073 TNS1Q9HBL0 1735 aaKnown RBP19.44■□□□□ 0.7
TRAF4-214ENST00000580073 QRICH2Q9H0J4 1663 aa19.43■□□□□ 0.7
TRAF4-214ENST00000580073 FAM83GA6ND36 823 aa19.43■□□□□ 0.7
TRAF4-214ENST00000580073 PAK3O75914 559 aaPredicted RBP19.43■□□□□ 0.7
TRAF4-214ENST00000580073 BTG4Q9NY30 223 aa19.43■□□□□ 0.7
TRAF4-214ENST00000580073 BAG6P46379 1132 aa19.42■□□□□ 0.7
TRAF4-214ENST00000580073 NRKQ7Z2Y5 1582 aa19.41■□□□□ 0.7
TRAF4-214ENST00000580073 TRIM26Q12899 539 aaPredicted RBP19.41■□□□□ 0.7
TRAF4-214ENST00000580073 PRDM11Q9NQV5 511 aa19.41■□□□□ 0.7
TRAF4-214ENST00000580073 FAM98CQ17RN3 349 aaKnown RBP19.39■□□□□ 0.69
TRAF4-214ENST00000580073 POLR3AO14802 1390 aaPredicted RBP19.39■□□□□ 0.69
TRAF4-214ENST00000580073 SPATA31A5Q5VU36 1347 aa19.38■□□□□ 0.69
TRAF4-214ENST00000580073 SPATA31A7Q8IWB4 1347 aa19.38■□□□□ 0.69
TRAF4-214ENST00000580073 NUDT16Q96DE0 195 aaKnown RBP19.38■□□□□ 0.69
TRAF4-214ENST00000580073 DEFB132Q7Z7B7 95 aa19.37■□□□□ 0.69
TRAF4-214ENST00000580073 DISP2A7MBM2 1401 aa19.36■□□□□ 0.69
TRAF4-214ENST00000580073 KIAA0232Q92628 1395 aa19.35■□□□□ 0.69
TRAF4-214ENST00000580073 LMO7Q8WWI1 1683 aa19.35■□□□□ 0.69
TRAF4-214ENST00000580073 CCDC61Q9Y6R9 512 aa19.34■□□□□ 0.69
TRAF4-214ENST00000580073 BRD4O60885 1362 aaPredicted RBP19.33■□□□□ 0.69
TRAF4-214ENST00000580073 CDK19Q9BWU1 502 aa19.33■□□□□ 0.68
TRAF4-214ENST00000580073 PARP4Q9UKK3 1724 aaKnown RBP19.32■□□□□ 0.68
TRAF4-214ENST00000580073 SRCAPQ6ZRS2 3230 aa19.32■□□□□ 0.68
TRAF4-214ENST00000580073 ACEP12821 1306 aa19.31■□□□□ 0.68
TRAF4-214ENST00000580073 SPATA31A1Q5TZJ5 1347 aa19.31■□□□□ 0.68
TRAF4-214ENST00000580073 RREB1Q92766 1687 aa19.31■□□□□ 0.68
TRAF4-214ENST00000580073 WNK3Q9BYP7 1800 aa19.31■□□□□ 0.68
TRAF4-214ENST00000580073 PPIP5K1Q6PFW1 1433 aa19.31■□□□□ 0.68
TRAF4-214ENST00000580073 SSH2Q76I76 1423 aa19.31■□□□□ 0.68
TRAF4-214ENST00000580073 TRPM1Q7Z4N2 1603 aa19.3■□□□□ 0.68
TRAF4-214ENST00000580073 CPDO75976 1380 aa19.3■□□□□ 0.68
TRAF4-214ENST00000580073 PARD3Q8TEW0 1356 aa19.3■□□□□ 0.68
TRAF4-214ENST00000580073 CENPJQ9HC77 1338 aaPredicted RBP19.29■□□□□ 0.68
TRAF4-214ENST00000580073 PLEKHG3A1L390 1219 aa19.29■□□□□ 0.68
TRAF4-214ENST00000580073 RGPD3A6NKT7 1758 aaPredicted RBP19.28■□□□□ 0.68
TRAF4-214ENST00000580073 AKAP12Q02952 1782 aa19.28■□□□□ 0.68
TRAF4-214ENST00000580073 RGPD4Q7Z3J3 1758 aa19.28■□□□□ 0.68
TRAF4-214ENST00000580073 SRPK2P78362 688 aaKnown RBP19.27■□□□□ 0.68
TRAF4-214ENST00000580073 NBPF8Q3BBV2 869 aa19.27■□□□□ 0.68
TRAF4-214ENST00000580073 FAM196AQ6ZSG2 479 aa19.27■□□□□ 0.68
TRAF4-214ENST00000580073 ABTB2Q8N961 1025 aa19.27■□□□□ 0.68
TRAF4-214ENST00000580073 STRN4Q9NRL3 753 aa19.27■□□□□ 0.68
TRAF4-214ENST00000580073 USP19O94966 1318 aa19.26■□□□□ 0.67
TRAF4-214ENST00000580073 NUP188Q5SRE5 1749 aa19.26■□□□□ 0.67
TRAF4-214ENST00000580073 EVA1CP58658 441 aa19.26■□□□□ 0.67
TRAF4-214ENST00000580073 CAMTA1Q9Y6Y1 1673 aa19.25■□□□□ 0.67
TRAF4-214ENST00000580073 ZC3H6P61129 1189 aaKnown RBP19.25■□□□□ 0.67
TRAF4-214ENST00000580073 CHRNA2Q15822 529 aa19.25■□□□□ 0.67
TRAF4-214ENST00000580073 BARGINQ6ZT62 677 aa19.25■□□□□ 0.67
TRAF4-214ENST00000580073 NLRP13Q86W25 1043 aa19.25■□□□□ 0.67
TRAF4-214ENST00000580073 PIK3C2AO00443 1686 aa19.24■□□□□ 0.67
TRAF4-214ENST00000580073 SLIT3O75094 1523 aa19.24■□□□□ 0.67
TRAF4-214ENST00000580073 C11orf95C9JLR9 678 aaPredicted RBP19.23■□□□□ 0.67
TRAF4-214ENST00000580073 NUTM2GQ5VZR2 741 aa19.23■□□□□ 0.67
TRAF4-214ENST00000580073 THRAP3Q9Y2W1 955 aaKnown RBP19.23■□□□□ 0.67
TRAF4-214ENST00000580073 COL5A2P05997 1499 aaPredicted RBP19.22■□□□□ 0.67
TRAF4-214ENST00000580073 EN1Q05925 392 aaPredicted RBP19.22■□□□□ 0.67
TRAF4-214ENST00000580073 PDE3BQ13370 1112 aa19.22■□□□□ 0.67
TRAF4-214ENST00000580073 SBF2Q86WG5 1849 aa19.22■□□□□ 0.67
TRAF4-214ENST00000580073 USP6P35125 1406 aa19.22■□□□□ 0.67
TRAF4-214ENST00000580073 LRRC37A3O60309 1634 aa19.22■□□□□ 0.67
TRAF4-214ENST00000580073 TCP11L2Q8N4U5 519 aa19.21■□□□□ 0.67
TRAF4-214ENST00000580073 PCGF6Q9BYE7 350 aa19.21■□□□□ 0.67
TRAF4-214ENST00000580073 PSDA5PKW4 1024 aaPredicted RBP19.2■□□□□ 0.66
TRAF4-214ENST00000580073 NBPF1Q3BBV0 1214 aa19.2■□□□□ 0.66
TRAF4-214ENST00000580073 USP35Q9P2H5 1018 aa19.2■□□□□ 0.66
TRAF4-214ENST00000580073 CRB1P82279 1406 aa19.19■□□□□ 0.66
TRAF4-214ENST00000580073 FAM182BQ5T319 152 aa19.19■□□□□ 0.66
TRAF4-214ENST00000580073 MON2Q7Z3U7 1717 aa19.19■□□□□ 0.66
TRAF4-214ENST00000580073 EVC2Q86UK5 1308 aa19.19■□□□□ 0.66
TRAF4-214ENST00000580073 ABCC6O95255 1503 aa19.18■□□□□ 0.66
TRAF4-214ENST00000580073 RGPD5Q99666 1765 aa19.18■□□□□ 0.66
TRAF4-214ENST00000580073 COL18A1P39060 1754 aa19.17■□□□□ 0.66
TRAF4-214ENST00000580073 TRIM37O94972 964 aa19.17■□□□□ 0.66
TRAF4-214ENST00000580073 GCP02774 474 aa19.17■□□□□ 0.66
TRAF4-214ENST00000580073 PEAK1Q9H792 1746 aa19.17■□□□□ 0.66
TRAF4-214ENST00000580073 OVOS2A0A0G2JMS6 1433 aa19.17■□□□□ 0.66
TRAF4-214ENST00000580073 OVOS2A0A0J9YW53 1432 aa19.17■□□□□ 0.66
TRAF4-214ENST00000580073 OVOS2Q6IE36 1432 aa19.17■□□□□ 0.66
TRAF4-214ENST00000580073 LARP1Q6PKG0 1096 aaKnown RBP19.16■□□□□ 0.66
TRAF4-214ENST00000580073 CABP2Q9NPB3 220 aa19.16■□□□□ 0.66
TRAF4-214ENST00000580073 USP54Q70EL1 1684 aa19.15■□□□□ 0.66
TRAF4-214ENST00000580073 APBA3O96018 575 aa19.15■□□□□ 0.66
TRAF4-214ENST00000580073 ROCK2O75116 1388 aaKnown RBP19.15■□□□□ 0.66
TRAF4-214ENST00000580073 AATKQ6ZMQ8 1374 aa19.15■□□□□ 0.66
TRAF4-214ENST00000580073 R3HDM1Q15032 1099 aaKnown RBP19.14■□□□□ 0.65
TRAF4-214ENST00000580073 EZH2Q15910 746 aaKnown RBP19.14■□□□□ 0.65
TRAF4-214ENST00000580073 NLRP6P59044 892 aa19.13■□□□□ 0.65
TRAF4-214ENST00000580073 NBPF14Q5TI25 921 aa19.13■□□□□ 0.65
TRAF4-214ENST00000580073 CAMKK2Q96RR4 588 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms