RNA–Protein interactions for RNA: ENST00000579685.1

APCDD1-204, Transcript of APC down-regulated 1, humanhuman

TSL 3

Gene APCDD1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APCDD1-204ENST00000579685 CCDC184Q52MB2 194 aa23.61■■□□□ 1.37
APCDD1-204ENST00000579685 COG3Q96JB2 828 aa23.61■■□□□ 1.37
APCDD1-204ENST00000579685 MST1RQ04912 1400 aa23.6■■□□□ 1.37
APCDD1-204ENST00000579685 PNISRQ8TF01 805 aaKnown RBP23.6■■□□□ 1.37
APCDD1-204ENST00000579685 PSME1Q06323 249 aa23.58■■□□□ 1.37
APCDD1-204ENST00000579685 NME9Q86XW9 330 aa23.57■■□□□ 1.36
APCDD1-204ENST00000579685 USP31Q70CQ4 1352 aa23.56■■□□□ 1.36
APCDD1-204ENST00000579685 CFAP53Q96M91 514 aa23.56■■□□□ 1.36
APCDD1-204ENST00000579685 ORAI2Q96SN7 254 aa23.56■■□□□ 1.36
APCDD1-204ENST00000579685 INSRP06213 1382 aa23.55■■□□□ 1.36
APCDD1-204ENST00000579685 AATKQ6ZMQ8 1374 aa23.55■■□□□ 1.36
APCDD1-204ENST00000579685 RGPD8O14715 1765 aaPredicted RBP23.55■■□□□ 1.36
APCDD1-204ENST00000579685 KIF1AQ12756 1690 aa23.54■■□□□ 1.36
APCDD1-204ENST00000579685 ANKRD26Q9UPS8 1709 aa23.54■■□□□ 1.36
APCDD1-204ENST00000579685 NRKQ7Z2Y5 1582 aa23.54■■□□□ 1.36
APCDD1-204ENST00000579685 KIF20BQ96Q89 1820 aa23.54■■□□□ 1.36
APCDD1-204ENST00000579685 FAM9BQ8IZU0 186 aa23.53■■□□□ 1.36
APCDD1-204ENST00000579685 SLAIN2Q9P270 581 aa23.53■■□□□ 1.36
APCDD1-204ENST00000579685 TNNT2P45379 298 aaPredicted RBP23.52■■□□□ 1.36
APCDD1-204ENST00000579685 MTHFSP49914 203 aa23.51■■□□□ 1.35
APCDD1-204ENST00000579685 NPHP3Q7Z494 1330 aa23.51■■□□□ 1.35
APCDD1-204ENST00000579685 OVOS2A0A0J9YW53 1432 aa23.5■■□□□ 1.35
APCDD1-204ENST00000579685 OVOS2Q6IE36 1432 aa23.5■■□□□ 1.35
APCDD1-204ENST00000579685 XIRP1Q702N8 1843 aaKnown RBP23.5■■□□□ 1.35
APCDD1-204ENST00000579685 FOXO3O43524 673 aa23.5■■□□□ 1.35
APCDD1-204ENST00000579685 YTHDC1Q96MU7 727 aaKnown RBP23.5■■□□□ 1.35
APCDD1-204ENST00000579685 LTBP4Q8N2S1 1624 aa23.48■■□□□ 1.35
APCDD1-204ENST00000579685 WDR43Q15061 677 aaKnown RBP eCLIP23.48■■□□□ 1.35
APCDD1-204ENST00000579685 KRT28Q7Z3Y7 464 aa23.48■■□□□ 1.35
APCDD1-204ENST00000579685 ABTB2Q8N961 1025 aa23.48■■□□□ 1.35
APCDD1-204ENST00000579685 PAK3O75914 559 aaPredicted RBP23.47■■□□□ 1.35
APCDD1-204ENST00000579685 CENPBP07199 599 aaPredicted RBP23.47■■□□□ 1.35
APCDD1-204ENST00000579685 NLRP6P59044 892 aa23.47■■□□□ 1.35
APCDD1-204ENST00000579685 SBNO1A3KN83 1393 aa23.45■■□□□ 1.34
APCDD1-204ENST00000579685 POLKQ9UBT6 870 aa23.45■■□□□ 1.34
APCDD1-204ENST00000579685 ZRANB1Q9UGI0 708 aa23.45■■□□□ 1.34
APCDD1-204ENST00000579685 PNPLA6Q8IY17 1366 aa23.44■■□□□ 1.34
APCDD1-204ENST00000579685 BRINP3Q76B58 766 aa23.44■■□□□ 1.34
APCDD1-204ENST00000579685 SMG6Q86US8 1419 aaKnown RBP23.43■■□□□ 1.34
APCDD1-204ENST00000579685 NUDCQ9Y266 331 aa23.43■■□□□ 1.34
APCDD1-204ENST00000579685 KCNH5Q8NCM2 988 aa23.41■■□□□ 1.34
APCDD1-204ENST00000579685 USP54Q70EL1 1684 aa23.4■■□□□ 1.34
APCDD1-204ENST00000579685 KIF24Q5T7B8 1368 aa23.4■■□□□ 1.34
APCDD1-204ENST00000579685 PIK3C2AO00443 1686 aa23.38■■□□□ 1.33
APCDD1-204ENST00000579685 HNRNPUQ00839 825 aaKnown RBP eCLIP23.38■■□□□ 1.33
APCDD1-204ENST00000579685 ADAMTS8Q9UP79 889 aa23.38■■□□□ 1.33
APCDD1-204ENST00000579685 CDK12Q9NYV4 1490 aaPredicted RBP23.37■■□□□ 1.33
APCDD1-204ENST00000579685 DIAPH1O60610 1272 aaKnown RBP23.37■■□□□ 1.33
APCDD1-204ENST00000579685 ARHGEF10O15013 1369 aa23.36■■□□□ 1.33
APCDD1-204ENST00000579685 SOS2Q07890 1332 aaPredicted RBP23.35■■□□□ 1.33
APCDD1-204ENST00000579685 BLMP54132 1417 aaPredicted RBP23.34■■□□□ 1.33
APCDD1-204ENST00000579685 XPCQ01831 940 aaPredicted RBP23.34■■□□□ 1.33
APCDD1-204ENST00000579685 NGEFQ8N5V2 710 aa23.34■■□□□ 1.33
APCDD1-204ENST00000579685 PNNQ9H307 717 aaKnown RBP23.34■■□□□ 1.33
APCDD1-204ENST00000579685 EMILIN1Q9Y6C2 1016 aa23.34■■□□□ 1.33
APCDD1-204ENST00000579685 IQSEC2Q5JU85 1478 aa23.34■■□□□ 1.33
APCDD1-204ENST00000579685 PXDNQ92626 1479 aa23.34■■□□□ 1.33
APCDD1-204ENST00000579685 USP19O94966 1318 aa23.33■■□□□ 1.33
APCDD1-204ENST00000579685 SPATA31A3Q5VYP0 1347 aa23.33■■□□□ 1.33
APCDD1-204ENST00000579685 TRPM3Q9HCF6 1732 aaPredicted RBP23.33■■□□□ 1.33
APCDD1-204ENST00000579685 COL3A1P02461 1466 aaPredicted RBP23.33■■□□□ 1.33
APCDD1-204ENST00000579685 PPM1GO15355 546 aaPredicted RBP23.33■■□□□ 1.33
APCDD1-204ENST00000579685 TOM1O60784 492 aa23.33■■□□□ 1.33
APCDD1-204ENST00000579685 RRS1Q15050 365 aaKnown RBP23.33■■□□□ 1.33
APCDD1-204ENST00000579685 TNS3Q68CZ2 1445 aa23.33■■□□□ 1.32
APCDD1-204ENST00000579685 NUTM2GQ5VZR2 741 aa23.32■■□□□ 1.32
APCDD1-204ENST00000579685 ZBED9Q6R2W3 1325 aa23.32■■□□□ 1.32
APCDD1-204ENST00000579685 LMOD2Q6P5Q4 547 aa23.31■■□□□ 1.32
APCDD1-204ENST00000579685 MAP3K19Q56UN5 1328 aa23.31■■□□□ 1.32
APCDD1-204ENST00000579685 FLT4P35916 1363 aa23.3■■□□□ 1.32
APCDD1-204ENST00000579685 FBLN1P23142 703 aa23.3■■□□□ 1.32
APCDD1-204ENST00000579685 RTL1A6NKG5 1358 aa23.29■■□□□ 1.32
APCDD1-204ENST00000579685 GCP02774 474 aa23.29■■□□□ 1.32
APCDD1-204ENST00000579685 AMPHP49418 695 aa23.29■■□□□ 1.32
APCDD1-204ENST00000579685 SLIT3O75094 1523 aa23.28■■□□□ 1.32
APCDD1-204ENST00000579685 U2AF1L5P0DN76 240 aaPredicted RBP23.28■■□□□ 1.32
APCDD1-204ENST00000579685 IL13P35225 146 aa23.28■■□□□ 1.32
APCDD1-204ENST00000579685 U2AF1Q01081 240 aaKnown RBP eCLIP23.28■■□□□ 1.32
APCDD1-204ENST00000579685 MAP2P11137 1827 aaKnown RBP23.28■■□□□ 1.32
APCDD1-204ENST00000579685 NCBP3Q53F19 620 aaKnown RBP23.27■■□□□ 1.32
APCDD1-204ENST00000579685 DDX17Q92841 729 aaKnown RBP23.27■■□□□ 1.32
APCDD1-204ENST00000579685 ALS2Q96Q42 1657 aa23.26■■□□□ 1.31
APCDD1-204ENST00000579685 RUNDC1Q96C34 613 aa23.26■■□□□ 1.31
APCDD1-204ENST00000579685 U2SURPO15042 1029 aaKnown RBP23.25■■□□□ 1.31
APCDD1-204ENST00000579685 SOX12O15370 315 aa23.25■■□□□ 1.31
APCDD1-204ENST00000579685 FCHSD2O94868 740 aa23.25■■□□□ 1.31
APCDD1-204ENST00000579685 NFAT5O94916 1531 aa23.24■■□□□ 1.31
APCDD1-204ENST00000579685 IP6K1Q92551 441 aa23.24■■□□□ 1.31
APCDD1-204ENST00000579685 SHPRHQ149N8 1683 aa23.23■■□□□ 1.31
APCDD1-204ENST00000579685 MARF1Q9Y4F3 1742 aaKnown RBP23.23■■□□□ 1.31
APCDD1-204ENST00000579685 ARHGEF25Q86VW2 580 aa23.23■■□□□ 1.31
APCDD1-204ENST00000579685 LRRC59Q96AG4 307 aaKnown RBP23.23■■□□□ 1.31
APCDD1-204ENST00000579685 HOXC9P31274 260 aa23.22■■□□□ 1.31
APCDD1-204ENST00000579685 NHSL1Q5SYE7 1610 aa23.22■■□□□ 1.31
APCDD1-204ENST00000579685 EIF4A2Q14240 407 aaKnown RBP23.21■■□□□ 1.31
APCDD1-204ENST00000579685 HSP90AB2PQ58FF8 381 aa23.21■■□□□ 1.31
APCDD1-204ENST00000579685 MED1Q15648 1581 aaPredicted RBP23.21■■□□□ 1.31
APCDD1-204ENST00000579685 NEFMP07197 916 aa23.2■■□□□ 1.3
APCDD1-204ENST00000579685 PDE3BQ13370 1112 aa23.2■■□□□ 1.3
APCDD1-204ENST00000579685 AHDC1Q5TGY3 1603 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms