RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 KIF1BO60333 1816 aa11.05□□□□□ -0.64
CDK5RAP3-209ENST00000578663 CABLES1Q8TDN4 633 aa11.05□□□□□ -0.64
CDK5RAP3-209ENST00000578663 KIF1AQ12756 1690 aa11.04□□□□□ -0.64
CDK5RAP3-209ENST00000578663 CCDC144AA2RUR9 1427 aa11.04□□□□□ -0.64
CDK5RAP3-209ENST00000578663 APLP1P51693 650 aa11.04□□□□□ -0.64
CDK5RAP3-209ENST00000578663 ESCO1Q5FWF5 840 aa11.04□□□□□ -0.64
CDK5RAP3-209ENST00000578663 SPATA31A5Q5VU36 1347 aa11.04□□□□□ -0.64
CDK5RAP3-209ENST00000578663 SPATA31A7Q8IWB4 1347 aa11.04□□□□□ -0.64
CDK5RAP3-209ENST00000578663 VGFO15240 615 aaPredicted RBP11.03□□□□□ -0.64
CDK5RAP3-209ENST00000578663 JMYQ8N9B5 988 aa11.03□□□□□ -0.64
CDK5RAP3-209ENST00000578663 TECPR2O15040 1411 aa11.02□□□□□ -0.64
CDK5RAP3-209ENST00000578663 TNS2Q63HR2 1409 aa11.02□□□□□ -0.64
CDK5RAP3-209ENST00000578663 GPBP1L1Q9HC44 474 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-209ENST00000578663 WWC3Q9ULE0 1092 aa11.02□□□□□ -0.65
CDK5RAP3-209ENST00000578663 RGPD8O14715 1765 aaPredicted RBP11.02□□□□□ -0.65
CDK5RAP3-209ENST00000578663 ADCY9O60503 1353 aa11.02□□□□□ -0.65
CDK5RAP3-209ENST00000578663 NAIPQ13075 1403 aa11.01□□□□□ -0.65
CDK5RAP3-209ENST00000578663 COL24A1Q17RW2 1714 aa11.01□□□□□ -0.65
CDK5RAP3-209ENST00000578663 LOC105371045A0A1W2PR82 267 aa11.01□□□□□ -0.65
CDK5RAP3-209ENST00000578663 RPGRIP1LQ68CZ1 1315 aa11.01□□□□□ -0.65
CDK5RAP3-209ENST00000578663 BTG4Q9NY30 223 aa11□□□□□ -0.65
CDK5RAP3-209ENST00000578663 PEAK1Q9H792 1746 aa11□□□□□ -0.65
CDK5RAP3-209ENST00000578663 TNS3Q68CZ2 1445 aa11□□□□□ -0.65
CDK5RAP3-209ENST00000578663 KNDC1Q76NI1 1749 aa10.99□□□□□ -0.65
CDK5RAP3-209ENST00000578663 FMN2Q9NZ56 1722 aa10.99□□□□□ -0.65
CDK5RAP3-209ENST00000578663 PPLO60437 1756 aa10.99□□□□□ -0.65
CDK5RAP3-209ENST00000578663 ARXQ96QS3 562 aa10.99□□□□□ -0.65
CDK5RAP3-209ENST00000578663 CRYBG1Q9Y4K1 1723 aa10.98□□□□□ -0.65
CDK5RAP3-209ENST00000578663 KIF3CO14782 793 aa10.98□□□□□ -0.65
CDK5RAP3-209ENST00000578663 HAP1P54257 671 aaPredicted RBP10.98□□□□□ -0.65
CDK5RAP3-209ENST00000578663 MTFR1LQ9H019 292 aa10.98□□□□□ -0.65
CDK5RAP3-209ENST00000578663 RRBP1Q9P2E9 1410 aaKnown RBP10.98□□□□□ -0.65
CDK5RAP3-209ENST00000578663 KLRG1Q96E93 195 aa10.97□□□□□ -0.65
CDK5RAP3-209ENST00000578663 KIAA1210Q9ULL0 1709 aa10.96□□□□□ -0.65
CDK5RAP3-209ENST00000578663 SBNO1A3KN83 1393 aa10.96□□□□□ -0.65
CDK5RAP3-209ENST00000578663 ARHGEF10O15013 1369 aa10.96□□□□□ -0.65
CDK5RAP3-209ENST00000578663 PLEKHG5O94827 1062 aa10.96□□□□□ -0.65
CDK5RAP3-209ENST00000578663 YBX3P16989 372 aaKnown RBP eCLIP10.96□□□□□ -0.65
CDK5RAP3-209ENST00000578663 PELP1Q8IZL8 1130 aaKnown RBP10.96□□□□□ -0.65
CDK5RAP3-209ENST00000578663 ZNF526Q8TF50 670 aaPredicted RBP10.96□□□□□ -0.65
CDK5RAP3-209ENST00000578663 AATKQ6ZMQ8 1374 aa10.95□□□□□ -0.66
CDK5RAP3-209ENST00000578663 ABCC11Q96J66 1382 aa10.95□□□□□ -0.66
CDK5RAP3-209ENST00000578663 PROM2Q8N271 834 aa10.95□□□□□ -0.66
CDK5RAP3-209ENST00000578663 ARHGEF28Q8N1W1 1705 aaKnown RBP10.95□□□□□ -0.66
CDK5RAP3-209ENST00000578663 SPATA31A1Q5TZJ5 1347 aa10.94□□□□□ -0.66
CDK5RAP3-209ENST00000578663 PLSCR1O15162 318 aa10.94□□□□□ -0.66
CDK5RAP3-209ENST00000578663 HTRA3P83110 453 aa10.94□□□□□ -0.66
CDK5RAP3-209ENST00000578663 NRXN1Q9ULB1 1477 aa10.93□□□□□ -0.66
CDK5RAP3-209ENST00000578663 PARP4Q9UKK3 1724 aaKnown RBP10.93□□□□□ -0.66
CDK5RAP3-209ENST00000578663 PSME1Q06323 249 aa10.93□□□□□ -0.66
CDK5RAP3-209ENST00000578663 FAM161AQ3B820 660 aa10.93□□□□□ -0.66
CDK5RAP3-209ENST00000578663 KRT28Q7Z3Y7 464 aa10.93□□□□□ -0.66
CDK5RAP3-209ENST00000578663 IFT172Q9UG01 1749 aa10.92□□□□□ -0.66
CDK5RAP3-209ENST00000578663 NLGN2Q8NFZ4 835 aa10.92□□□□□ -0.66
CDK5RAP3-209ENST00000578663 TRPM3Q9HCF6 1732 aaPredicted RBP10.92□□□□□ -0.66
CDK5RAP3-209ENST00000578663 TOPAZ1Q8N9V7 1692 aa10.92□□□□□ -0.66
CDK5RAP3-209ENST00000578663 ALS2Q96Q42 1657 aa10.92□□□□□ -0.66
CDK5RAP3-209ENST00000578663 NUTM2FA1L443 756 aa10.91□□□□□ -0.66
CDK5RAP3-209ENST00000578663 BCL11BQ9C0K0 894 aaPredicted RBP10.91□□□□□ -0.66
CDK5RAP3-209ENST00000578663 SLC15A2Q16348 729 aa10.9□□□□□ -0.66
CDK5RAP3-209ENST00000578663 PTF1AQ7RTS3 328 aa10.9□□□□□ -0.66
CDK5RAP3-209ENST00000578663 PHF8Q9UPP1 1060 aa10.9□□□□□ -0.66
CDK5RAP3-209ENST00000578663 PAPPAQ13219 1627 aa10.9□□□□□ -0.66
CDK5RAP3-209ENST00000578663 ANKRD30BQ9BXX2 1392 aa10.9□□□□□ -0.67
CDK5RAP3-209ENST00000578663 PLEKHH1Q9ULM0 1364 aa10.9□□□□□ -0.67
CDK5RAP3-209ENST00000578663 GRIN3BO60391 1043 aa10.89□□□□□ -0.67
CDK5RAP3-209ENST00000578663 WAPLQ7Z5K2 1190 aa10.89□□□□□ -0.67
CDK5RAP3-209ENST00000578663 SIRT1Q96EB6 747 aa10.89□□□□□ -0.67
CDK5RAP3-209ENST00000578663 ANKARQ7Z5J8 1434 aa10.89□□□□□ -0.67
CDK5RAP3-209ENST00000578663 PIK3C2GO75747 1445 aa10.88□□□□□ -0.67
CDK5RAP3-209ENST00000578663 PDE3BQ13370 1112 aa10.88□□□□□ -0.67
CDK5RAP3-209ENST00000578663 QSER1Q2KHR3 1735 aa10.88□□□□□ -0.67
CDK5RAP3-209ENST00000578663 YTHDC2Q9H6S0 1430 aaKnown RBP10.88□□□□□ -0.67
CDK5RAP3-209ENST00000578663 TNRC18O15417 2968 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP3-209ENST00000578663 KLHL34Q8N239 644 aa10.87□□□□□ -0.67
CDK5RAP3-209ENST00000578663 STK32BQ9NY57 414 aa10.87□□□□□ -0.67
CDK5RAP3-209ENST00000578663 ADGRF5Q8IZF2 1346 aa10.86□□□□□ -0.67
CDK5RAP3-209ENST00000578663 TUBGCP6Q96RT7 1819 aa10.86□□□□□ -0.67
CDK5RAP3-209ENST00000578663 SPATA31E1Q6ZUB1 1445 aa10.86□□□□□ -0.67
CDK5RAP3-209ENST00000578663 HSPA1AP0DMV8 641 aaKnown RBP10.86□□□□□ -0.67
CDK5RAP3-209ENST00000578663 HSPA1BP0DMV9 641 aaKnown RBP10.86□□□□□ -0.67
CDK5RAP3-209ENST00000578663 STK26Q9P289 416 aa10.86□□□□□ -0.67
CDK5RAP3-209ENST00000578663 ITGAEP38570 1179 aa10.85□□□□□ -0.67
CDK5RAP3-209ENST00000578663 BARGINQ6ZT62 677 aa10.85□□□□□ -0.67
CDK5RAP3-209ENST00000578663 LRRC37A3O60309 1634 aa10.84□□□□□ -0.67
CDK5RAP3-209ENST00000578663 TOMM70O94826 608 aa10.84□□□□□ -0.67
CDK5RAP3-209ENST00000578663 AKAP12Q02952 1782 aa10.84□□□□□ -0.67
CDK5RAP3-209ENST00000578663 PDE4DIPQ5VU43 2346 aa10.83□□□□□ -0.68
CDK5RAP3-209ENST00000578663 LMOD2Q6P5Q4 547 aa10.83□□□□□ -0.68
CDK5RAP3-209ENST00000578663 TULP4Q9NRJ4 1543 aa10.83□□□□□ -0.68
CDK5RAP3-209ENST00000578663 OVOS2A0A0G2JMS6 1433 aa10.83□□□□□ -0.68
CDK5RAP3-209ENST00000578663 OVOS2A0A0J9YW53 1432 aa10.83□□□□□ -0.68
CDK5RAP3-209ENST00000578663 OVOS2Q6IE36 1432 aa10.83□□□□□ -0.68
CDK5RAP3-209ENST00000578663 ATP7BP35670 1465 aa10.82□□□□□ -0.68
CDK5RAP3-209ENST00000578663 EIF3AQ14152 1382 aaKnown RBP10.82□□□□□ -0.68
CDK5RAP3-209ENST00000578663 TXNRD1Q16881 649 aa10.82□□□□□ -0.68
CDK5RAP3-209ENST00000578663 PHRF1Q9P1Y6 1649 aaKnown RBP10.82□□□□□ -0.68
CDK5RAP3-209ENST00000578663 WNK3Q9BYP7 1800 aa10.81□□□□□ -0.68
CDK5RAP3-209ENST00000578663 GPRASP1Q5JY77 1395 aa10.81□□□□□ -0.68
CDK5RAP3-209ENST00000578663 TMEM132EQ6IEE7 984 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms