RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 NRKQ7Z2Y5 1582 aa6.58□□□□□ -1.36
PPP4R1-209ENST00000578329 CACNB1Q02641 598 aaPredicted RBP6.58□□□□□ -1.36
PPP4R1-209ENST00000578329 FAM182BQ5T319 152 aa6.58□□□□□ -1.36
PPP4R1-209ENST00000578329 NUDT16Q96DE0 195 aaKnown RBP6.58□□□□□ -1.36
PPP4R1-209ENST00000578329 CDK19Q9BWU1 502 aa6.58□□□□□ -1.36
PPP4R1-209ENST00000578329 POGKQ9P215 609 aa6.58□□□□□ -1.36
PPP4R1-209ENST00000578329 ARHGEF10O15013 1369 aa6.57□□□□□ -1.36
PPP4R1-209ENST00000578329 SPATA31A5Q5VU36 1347 aa6.57□□□□□ -1.36
PPP4R1-209ENST00000578329 SPATA31A7Q8IWB4 1347 aa6.57□□□□□ -1.36
PPP4R1-209ENST00000578329 TNS1Q9HBL0 1735 aaKnown RBP6.57□□□□□ -1.36
PPP4R1-209ENST00000578329 PLEKHG3A1L390 1219 aa6.57□□□□□ -1.36
PPP4R1-209ENST00000578329 PSME1Q06323 249 aa6.57□□□□□ -1.36
PPP4R1-209ENST00000578329 SIN3AQ96ST3 1273 aa6.57□□□□□ -1.36
PPP4R1-209ENST00000578329 BLMP54132 1417 aaPredicted RBP6.57□□□□□ -1.36
PPP4R1-209ENST00000578329 COL18A1P39060 1754 aa6.57□□□□□ -1.36
PPP4R1-209ENST00000578329 KIAA0232Q92628 1395 aa6.57□□□□□ -1.36
PPP4R1-209ENST00000578329 USP19O94966 1318 aa6.56□□□□□ -1.36
PPP4R1-209ENST00000578329 ACEP12821 1306 aa6.56□□□□□ -1.36
PPP4R1-209ENST00000578329 CHRNA2Q15822 529 aa6.56□□□□□ -1.36
PPP4R1-209ENST00000578329 NBPF8Q3BBV2 869 aa6.56□□□□□ -1.36
PPP4R1-209ENST00000578329 L3MBTL2Q969R5 705 aa6.56□□□□□ -1.36
PPP4R1-209ENST00000578329 BTG4Q9NY30 223 aa6.56□□□□□ -1.36
PPP4R1-209ENST00000578329 TRPM1Q7Z4N2 1603 aa6.56□□□□□ -1.36
PPP4R1-209ENST00000578329 ITSN1Q15811 1721 aa6.56□□□□□ -1.36
PPP4R1-209ENST00000578329 FAM98CQ17RN3 349 aaKnown RBP6.55□□□□□ -1.36
PPP4R1-209ENST00000578329 NUTM2GQ5VZR2 741 aa6.55□□□□□ -1.36
PPP4R1-209ENST00000578329 STAC3Q96MF2 364 aa6.55□□□□□ -1.36
PPP4R1-209ENST00000578329 PIK3C2AO00443 1686 aa6.55□□□□□ -1.36
PPP4R1-209ENST00000578329 QRICH2Q9H0J4 1663 aa6.55□□□□□ -1.36
PPP4R1-209ENST00000578329 SPATA31A1Q5TZJ5 1347 aa6.54□□□□□ -1.36
PPP4R1-209ENST00000578329 PEAK1Q9H792 1746 aa6.54□□□□□ -1.36
PPP4R1-209ENST00000578329 LMOD2Q6P5Q4 547 aa6.54□□□□□ -1.36
PPP4R1-209ENST00000578329 KRT27Q7Z3Y8 459 aa6.54□□□□□ -1.36
PPP4R1-209ENST00000578329 CABP2Q9NPB3 220 aa6.54□□□□□ -1.36
PPP4R1-209ENST00000578329 SLIT3O75094 1523 aa6.54□□□□□ -1.36
PPP4R1-209ENST00000578329 CD163L1Q9NR16 1453 aa6.53□□□□□ -1.36
PPP4R1-209ENST00000578329 ZC3H6P61129 1189 aaKnown RBP6.53□□□□□ -1.36
PPP4R1-209ENST00000578329 PTF1AQ7RTS3 328 aa6.53□□□□□ -1.36
PPP4R1-209ENST00000578329 CCDC125Q86Z20 511 aa6.53□□□□□ -1.36
PPP4R1-209ENST00000578329 CCDC61Q9Y6R9 512 aa6.53□□□□□ -1.36
PPP4R1-209ENST00000578329 CPDO75976 1380 aa6.53□□□□□ -1.36
PPP4R1-209ENST00000578329 GPRASP1Q5JY77 1395 aa6.53□□□□□ -1.36
PPP4R1-209ENST00000578329 DISP2A7MBM2 1401 aa6.52□□□□□ -1.37
PPP4R1-209ENST00000578329 USP6P35125 1406 aa6.52□□□□□ -1.37
PPP4R1-209ENST00000578329 PPIP5K1Q6PFW1 1433 aa6.52□□□□□ -1.37
PPP4R1-209ENST00000578329 LARP1Q6PKG0 1096 aaKnown RBP6.52□□□□□ -1.37
PPP4R1-209ENST00000578329 NGDNQ8NEJ9 315 aaKnown RBP6.52□□□□□ -1.37
PPP4R1-209ENST00000578329 AXIN2Q9Y2T1 843 aa6.52□□□□□ -1.37
PPP4R1-209ENST00000578329 EIF3AQ14152 1382 aaKnown RBP6.52□□□□□ -1.37
PPP4R1-209ENST00000578329 COL5A2P05997 1499 aaPredicted RBP6.52□□□□□ -1.37
PPP4R1-209ENST00000578329 AKAP12Q02952 1782 aa6.52□□□□□ -1.37
PPP4R1-209ENST00000578329 CENPJQ9HC77 1338 aaPredicted RBP6.51□□□□□ -1.37
PPP4R1-209ENST00000578329 CPSF1Q10570 1443 aaKnown RBP6.51□□□□□ -1.37
PPP4R1-209ENST00000578329 NFAT5O94916 1531 aa6.51□□□□□ -1.37
PPP4R1-209ENST00000578329 LRP5O75197 1615 aa6.51□□□□□ -1.37
PPP4R1-209ENST00000578329 CAMKK2Q96RR4 588 aa6.51□□□□□ -1.37
PPP4R1-209ENST00000578329 PRDM11Q9NQV5 511 aa6.51□□□□□ -1.37
PPP4R1-209ENST00000578329 CABP1Q9NZU7 370 aa6.51□□□□□ -1.37
PPP4R1-209ENST00000578329 ZRANB1Q9UGI0 708 aa6.51□□□□□ -1.37
PPP4R1-209ENST00000578329 RGPD5Q99666 1765 aa6.51□□□□□ -1.37
PPP4R1-209ENST00000578329 RREB1Q92766 1687 aa6.5□□□□□ -1.37
PPP4R1-209ENST00000578329 PSDA5PKW4 1024 aaPredicted RBP6.5□□□□□ -1.37
PPP4R1-209ENST00000578329 PAK3O75914 559 aaPredicted RBP6.5□□□□□ -1.37
PPP4R1-209ENST00000578329 GCP02774 474 aa6.5□□□□□ -1.37
PPP4R1-209ENST00000578329 EN1Q05925 392 aaPredicted RBP6.5□□□□□ -1.37
PPP4R1-209ENST00000578329 RGPD1P0DJD0 1748 aa6.5□□□□□ -1.37
PPP4R1-209ENST00000578329 NUP188Q5SRE5 1749 aa6.5□□□□□ -1.37
PPP4R1-209ENST00000578329 PARP4Q9UKK3 1724 aaKnown RBP6.5□□□□□ -1.37
PPP4R1-209ENST00000578329 LRRC37A3O60309 1634 aa6.5□□□□□ -1.37
PPP4R1-209ENST00000578329 SBF2Q86WG5 1849 aa6.49□□□□□ -1.37
PPP4R1-209ENST00000578329 WNK3Q9BYP7 1800 aa6.49□□□□□ -1.37
PPP4R1-209ENST00000578329 MSH5O43196 834 aa6.49□□□□□ -1.37
PPP4R1-209ENST00000578329 HAP1P54257 671 aaPredicted RBP6.49□□□□□ -1.37
PPP4R1-209ENST00000578329 EZH2Q15910 746 aaKnown RBP6.49□□□□□ -1.37
PPP4R1-209ENST00000578329 BARGINQ6ZT62 677 aa6.49□□□□□ -1.37
PPP4R1-209ENST00000578329 STRN4Q9NRL3 753 aa6.49□□□□□ -1.37
PPP4R1-209ENST00000578329 CCDC9Q9Y3X0 531 aaKnown RBP6.49□□□□□ -1.37
PPP4R1-209ENST00000578329 MON2Q7Z3U7 1717 aa6.49□□□□□ -1.37
PPP4R1-209ENST00000578329 USP54Q70EL1 1684 aa6.49□□□□□ -1.37
PPP4R1-209ENST00000578329 AATKQ6ZMQ8 1374 aa6.48□□□□□ -1.37
PPP4R1-209ENST00000578329 SBNO2Q9Y2G9 1366 aa6.48□□□□□ -1.37
PPP4R1-209ENST00000578329 ARHGEF25Q86VW2 580 aa6.48□□□□□ -1.37
PPP4R1-209ENST00000578329 ABTB2Q8N961 1025 aa6.48□□□□□ -1.37
PPP4R1-209ENST00000578329 TTC21BQ7Z4L5 1316 aa6.48□□□□□ -1.37
PPP4R1-209ENST00000578329 TRIM37O94972 964 aa6.47□□□□□ -1.37
PPP4R1-209ENST00000578329 SRPK2P78362 688 aaKnown RBP6.47□□□□□ -1.37
PPP4R1-209ENST00000578329 PROM2Q8N271 834 aa6.47□□□□□ -1.37
PPP4R1-209ENST00000578329 TESK2Q96S53 571 aa6.47□□□□□ -1.37
PPP4R1-209ENST00000578329 USP35Q9P2H5 1018 aa6.47□□□□□ -1.37
PPP4R1-209ENST00000578329 BRD4O60885 1362 aaPredicted RBP6.46□□□□□ -1.37
PPP4R1-209ENST00000578329 CRB1P82279 1406 aa6.46□□□□□ -1.38
PPP4R1-209ENST00000578329 NEUROD1Q13562 356 aa6.46□□□□□ -1.38
PPP4R1-209ENST00000578329 MARCH10Q8NA82 808 aaPredicted RBP6.46□□□□□ -1.38
PPP4R1-209ENST00000578329 PDGFDQ9GZP0 370 aaPredicted RBP6.46□□□□□ -1.38
PPP4R1-209ENST00000578329 ROCK2O75116 1388 aaKnown RBP6.45□□□□□ -1.38
PPP4R1-209ENST00000578329 USP31Q70CQ4 1352 aa6.45□□□□□ -1.38
PPP4R1-209ENST00000578329 NLRP6P59044 892 aa6.45□□□□□ -1.38
PPP4R1-209ENST00000578329 R3HDM1Q15032 1099 aaKnown RBP6.45□□□□□ -1.38
PPP4R1-209ENST00000578329 NLRP13Q86W25 1043 aa6.45□□□□□ -1.38
PPP4R1-209ENST00000578329 NME9Q86XW9 330 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms