RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 MARF1Q9Y4F3 1742 aaKnown RBP32.52■■■□□ 2.8
LIMD2-204ENST00000578297 CABLES1Q8TDN4 633 aa32.52■■■□□ 2.8
LIMD2-204ENST00000578297 BRD4O60885 1362 aaPredicted RBP32.52■■■□□ 2.8
LIMD2-204ENST00000578297 HAP1P54257 671 aaPredicted RBP32.49■■■□□ 2.79
LIMD2-204ENST00000578297 ABCA3Q99758 1704 aa32.48■■■□□ 2.79
LIMD2-204ENST00000578297 FNBP4Q8N3X1 1017 aaPredicted RBP32.48■■■□□ 2.79
LIMD2-204ENST00000578297 ZNF692Q9BU19 519 aaPredicted RBP32.48■■■□□ 2.79
LIMD2-204ENST00000578297 USP6P35125 1406 aa32.48■■■□□ 2.79
LIMD2-204ENST00000578297 PLEKHG5O94827 1062 aa32.46■■■□□ 2.79
LIMD2-204ENST00000578297 CPSF1Q10570 1443 aaKnown RBP32.44■■■□□ 2.78
LIMD2-204ENST00000578297 AKAP12Q02952 1782 aa32.43■■■□□ 2.78
LIMD2-204ENST00000578297 TMF1P82094 1093 aa32.43■■■□□ 2.78
LIMD2-204ENST00000578297 ABTB2Q8N961 1025 aa32.43■■■□□ 2.78
LIMD2-204ENST00000578297 SSH2Q76I76 1423 aa32.43■■■□□ 2.78
LIMD2-204ENST00000578297 USP21Q9UK80 565 aa32.42■■■□□ 2.78
LIMD2-204ENST00000578297 CRYBG1Q9Y4K1 1723 aa32.42■■■□□ 2.78
LIMD2-204ENST00000578297 TMC1Q8TDI8 760 aa32.4■■■□□ 2.78
LIMD2-204ENST00000578297 NUTM2GQ5VZR2 741 aa32.39■■■□□ 2.78
LIMD2-204ENST00000578297 QTRT2Q9H974 415 aaKnown RBP32.39■■■□□ 2.78
LIMD2-204ENST00000578297 SLC12A5Q9H2X9 1139 aa32.38■■■□□ 2.77
LIMD2-204ENST00000578297 CD163L1Q9NR16 1453 aa32.37■■■□□ 2.77
LIMD2-204ENST00000578297 KTN1Q86UP2 1357 aaKnown RBP32.37■■■□□ 2.77
LIMD2-204ENST00000578297 SLIT2O94813 1529 aa32.36■■■□□ 2.77
LIMD2-204ENST00000578297 BCL9LQ86UU0 1499 aa32.36■■■□□ 2.77
LIMD2-204ENST00000578297 NINLQ9Y2I6 1382 aa32.36■■■□□ 2.77
LIMD2-204ENST00000578297 NLRP13Q86W25 1043 aa32.36■■■□□ 2.77
LIMD2-204ENST00000578297 TTC21BQ7Z4L5 1316 aa32.35■■■□□ 2.77
LIMD2-204ENST00000578297 RXRBP28702 533 aa32.35■■■□□ 2.77
LIMD2-204ENST00000578297 EIF4G2P78344 907 aaKnown RBP eCLIP32.35■■■□□ 2.77
LIMD2-204ENST00000578297 PHRF1Q9P1Y6 1649 aaKnown RBP32.34■■■□□ 2.77
LIMD2-204ENST00000578297 FAM83GA6ND36 823 aa32.34■■■□□ 2.77
LIMD2-204ENST00000578297 CDCA8Q53HL2 280 aa32.34■■■□□ 2.77
LIMD2-204ENST00000578297 MON2Q7Z3U7 1717 aa32.34■■■□□ 2.77
LIMD2-204ENST00000578297 USP19O94966 1318 aa32.33■■■□□ 2.77
LIMD2-204ENST00000578297 TTC21AQ8NDW8 1320 aa32.33■■■□□ 2.77
LIMD2-204ENST00000578297 HDGFL2Q7Z4V5 671 aaPredicted RBP32.33■■■□□ 2.77
LIMD2-204ENST00000578297 TRPC5Q9UL62 973 aaPredicted RBP32.33■■■□□ 2.77
LIMD2-204ENST00000578297 NRKQ7Z2Y5 1582 aa32.32■■■□□ 2.77
LIMD2-204ENST00000578297 TERF2IPQ9NYB0 399 aa32.32■■■□□ 2.76
LIMD2-204ENST00000578297 SOCS7O14512 581 aa32.31■■■□□ 2.76
LIMD2-204ENST00000578297 UNC5CLQ8IV45 518 aa32.31■■■□□ 2.76
LIMD2-204ENST00000578297 ATRNO75882 1429 aa32.3■■■□□ 2.76
LIMD2-204ENST00000578297 NLRP6P59044 892 aa32.3■■■□□ 2.76
LIMD2-204ENST00000578297 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.3■■■□□ 2.76
LIMD2-204ENST00000578297 PIK3C2AO00443 1686 aa32.3■■■□□ 2.76
LIMD2-204ENST00000578297 HSPA5P11021 654 aaKnown RBP32.29■■■□□ 2.76
LIMD2-204ENST00000578297 RBM6P78332 1123 aaKnown RBP32.29■■■□□ 2.76
LIMD2-204ENST00000578297 NWD2Q9ULI1 1742 aa32.29■■■□□ 2.76
LIMD2-204ENST00000578297 PLCH1Q4KWH8 1693 aa32.28■■■□□ 2.76
LIMD2-204ENST00000578297 A0A1W2PP64 1363 aa32.28■■■□□ 2.76
LIMD2-204ENST00000578297 COL14A1Q05707 1796 aaKnown RBP32.27■■■□□ 2.76
LIMD2-204ENST00000578297 GCP02774 474 aa32.26■■■□□ 2.75
LIMD2-204ENST00000578297 CDK12Q9NYV4 1490 aaPredicted RBP32.25■■■□□ 2.75
LIMD2-204ENST00000578297 KIAA0232Q92628 1395 aa32.25■■■□□ 2.75
LIMD2-204ENST00000578297 PRDM11Q9NQV5 511 aa32.25■■■□□ 2.75
LIMD2-204ENST00000578297 EDC4Q6P2E9 1401 aaKnown RBP32.25■■■□□ 2.75
LIMD2-204ENST00000578297 ZC3H6P61129 1189 aaKnown RBP32.24■■■□□ 2.75
LIMD2-204ENST00000578297 SLIT3O75094 1523 aa32.23■■■□□ 2.75
LIMD2-204ENST00000578297 CPDO75976 1380 aa32.22■■■□□ 2.75
LIMD2-204ENST00000578297 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.22■■■□□ 2.75
LIMD2-204ENST00000578297 BTG4Q9NY30 223 aa32.22■■■□□ 2.75
LIMD2-204ENST00000578297 ANKRD36BQ8N2N9 1353 aa32.21■■■□□ 2.75
LIMD2-204ENST00000578297 GJD4Q96KN9 370 aaPredicted RBP32.2■■■□□ 2.75
LIMD2-204ENST00000578297 VPS72Q15906 364 aa32.19■■■□□ 2.74
LIMD2-204ENST00000578297 USP31Q70CQ4 1352 aa32.19■■■□□ 2.74
LIMD2-204ENST00000578297 NRAPQ86VF7 1730 aa32.17■■■□□ 2.74
LIMD2-204ENST00000578297 CHRNA2Q15822 529 aa32.17■■■□□ 2.74
LIMD2-204ENST00000578297 NME9Q86XW9 330 aa32.16■■■□□ 2.74
LIMD2-204ENST00000578297 KCNH5Q8NCM2 988 aa32.16■■■□□ 2.74
LIMD2-204ENST00000578297 USP54Q70EL1 1684 aa32.15■■■□□ 2.74
LIMD2-204ENST00000578297 RGS12O14924 1447 aa32.14■■■□□ 2.74
LIMD2-204ENST00000578297 MYOM1P52179 1685 aa32.13■■■□□ 2.73
LIMD2-204ENST00000578297 ZRANB1Q9UGI0 708 aa32.13■■■□□ 2.73
LIMD2-204ENST00000578297 GLI3P10071 1580 aa32.11■■■□□ 2.73
LIMD2-204ENST00000578297 LMO7Q8WWI1 1683 aa32.1■■■□□ 2.73
LIMD2-204ENST00000578297 CCDC9Q9Y3X0 531 aaKnown RBP32.09■■■□□ 2.73
LIMD2-204ENST00000578297 CAMTA1Q9Y6Y1 1673 aa32.08■■■□□ 2.73
LIMD2-204ENST00000578297 AATKQ6ZMQ8 1374 aa32.07■■■□□ 2.73
LIMD2-204ENST00000578297 NFAT5O94916 1531 aa32.07■■■□□ 2.72
LIMD2-204ENST00000578297 ARHGEF25Q86VW2 580 aa32.07■■■□□ 2.72
LIMD2-204ENST00000578297 OVOS2A0A0J9YW53 1432 aa32.07■■■□□ 2.72
LIMD2-204ENST00000578297 OVOS2Q6IE36 1432 aa32.07■■■□□ 2.72
LIMD2-204ENST00000578297 SOX12O15370 315 aa32.05■■■□□ 2.72
LIMD2-204ENST00000578297 POLR3GLQ9BT43 218 aa32.05■■■□□ 2.72
LIMD2-204ENST00000578297 SPATA31A5Q5VU36 1347 aa32.03■■■□□ 2.72
LIMD2-204ENST00000578297 SPATA31A7Q8IWB4 1347 aa32.03■■■□□ 2.72
LIMD2-204ENST00000578297 ZBTB7CA1YPR0 619 aa32.03■■■□□ 2.72
LIMD2-204ENST00000578297 C11orf95C9JLR9 678 aaPredicted RBP32.03■■■□□ 2.72
LIMD2-204ENST00000578297 EVA1CP58658 441 aa32.03■■■□□ 2.72
LIMD2-204ENST00000578297 STRN4Q9NRL3 753 aa32.03■■■□□ 2.72
LIMD2-204ENST00000578297 COL18A1P39060 1754 aa32.02■■■□□ 2.72
LIMD2-204ENST00000578297 ONECUT3O60422 494 aaPredicted RBP32.02■■■□□ 2.72
LIMD2-204ENST00000578297 CARD14Q9BXL6 1004 aa32.02■■■□□ 2.72
LIMD2-204ENST00000578297 COG3Q96JB2 828 aa32.01■■■□□ 2.71
LIMD2-204ENST00000578297 FYB1O15117 783 aa32■■■□□ 2.71
LIMD2-204ENST00000578297 COL5A2P05997 1499 aaPredicted RBP31.99■■■□□ 2.71
LIMD2-204ENST00000578297 SPATA31A1Q5TZJ5 1347 aa31.98■■■□□ 2.71
LIMD2-204ENST00000578297 AXIN2Q9Y2T1 843 aa31.97■■■□□ 2.71
LIMD2-204ENST00000578297 NSD3Q9BZ95 1437 aa31.97■■■□□ 2.71
LIMD2-204ENST00000578297 LARP1Q6PKG0 1096 aaKnown RBP31.96■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms