RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 CCDC7Q96M83 1385 aa15.54■□□□□ 0.08
TRAPPC8-204ENST00000578252 NINLQ9Y2I6 1382 aa15.54■□□□□ 0.08
TRAPPC8-204ENST00000578252 GABBR2O75899 941 aa15.54■□□□□ 0.08
TRAPPC8-204ENST00000578252 USP32Q8NFA0 1604 aa15.54■□□□□ 0.08
TRAPPC8-204ENST00000578252 KIF7Q2M1P5 1343 aa15.53■□□□□ 0.08
TRAPPC8-204ENST00000578252 MYOM1P52179 1685 aa15.53■□□□□ 0.08
TRAPPC8-204ENST00000578252 CABP2Q9NPB3 220 aa15.52■□□□□ 0.08
TRAPPC8-204ENST00000578252 KIF1AQ12756 1690 aa15.51■□□□□ 0.07
TRAPPC8-204ENST00000578252 WASHC2AQ641Q2 1341 aa15.51■□□□□ 0.07
TRAPPC8-204ENST00000578252 C11orf95C9JLR9 678 aaPredicted RBP15.51■□□□□ 0.07
TRAPPC8-204ENST00000578252 PLCD3Q8N3E9 789 aa15.51■□□□□ 0.07
TRAPPC8-204ENST00000578252 RGPD8O14715 1765 aaPredicted RBP15.51■□□□□ 0.07
TRAPPC8-204ENST00000578252 MST1RQ04912 1400 aa15.51■□□□□ 0.07
TRAPPC8-204ENST00000578252 NUDT16Q96DE0 195 aaKnown RBP15.5■□□□□ 0.07
TRAPPC8-204ENST00000578252 C1orf167Q5SNV9 1468 aa15.49■□□□□ 0.07
TRAPPC8-204ENST00000578252 PAK3O75914 559 aaPredicted RBP15.49■□□□□ 0.07
TRAPPC8-204ENST00000578252 CERKQ8TCT0 537 aa15.49■□□□□ 0.07
TRAPPC8-204ENST00000578252 CCDC61Q9Y6R9 512 aa15.49■□□□□ 0.07
TRAPPC8-204ENST00000578252 PRR36Q9H6K5 1346 aa15.48■□□□□ 0.07
TRAPPC8-204ENST00000578252 POLR3GLQ9BT43 218 aa15.48■□□□□ 0.07
TRAPPC8-204ENST00000578252 PPIP5K1Q6PFW1 1433 aa15.48■□□□□ 0.07
TRAPPC8-204ENST00000578252 ZNF579Q8NAF0 562 aaKnown RBP15.47■□□□□ 0.07
TRAPPC8-204ENST00000578252 FBXO3Q9UK99 471 aa15.47■□□□□ 0.07
TRAPPC8-204ENST00000578252 NUTM2FA1L443 756 aa15.46■□□□□ 0.07
TRAPPC8-204ENST00000578252 AKAP12Q02952 1782 aa15.46■□□□□ 0.07
TRAPPC8-204ENST00000578252 PLEKHG3A1L390 1219 aa15.45■□□□□ 0.06
TRAPPC8-204ENST00000578252 TOM1O60784 492 aa15.45■□□□□ 0.06
TRAPPC8-204ENST00000578252 TMC1Q8TDI8 760 aa15.45■□□□□ 0.06
TRAPPC8-204ENST00000578252 SLAIN2Q9P270 581 aa15.45■□□□□ 0.06
TRAPPC8-204ENST00000578252 TERF2IPQ9NYB0 399 aa15.44■□□□□ 0.06
TRAPPC8-204ENST00000578252 ANKRD36BQ8N2N9 1353 aa15.44■□□□□ 0.06
TRAPPC8-204ENST00000578252 MON2Q7Z3U7 1717 aa15.43■□□□□ 0.06
TRAPPC8-204ENST00000578252 ESCO1Q5FWF5 840 aa15.43■□□□□ 0.06
TRAPPC8-204ENST00000578252 HDGFL2Q7Z4V5 671 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC8-204ENST00000578252 CABP1Q9NZU7 370 aa15.43■□□□□ 0.06
TRAPPC8-204ENST00000578252 PHF8Q9UPP1 1060 aa15.43■□□□□ 0.06
TRAPPC8-204ENST00000578252 POLR3AO14802 1390 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC8-204ENST00000578252 SLC12A5Q9H2X9 1139 aa15.42■□□□□ 0.06
TRAPPC8-204ENST00000578252 CPSF1Q10570 1443 aaKnown RBP15.42■□□□□ 0.06
TRAPPC8-204ENST00000578252 ROBO1Q9Y6N7 1651 aa15.41■□□□□ 0.06
TRAPPC8-204ENST00000578252 CD163L1Q9NR16 1453 aa15.41■□□□□ 0.06
TRAPPC8-204ENST00000578252 BRD4O60885 1362 aaPredicted RBP15.41■□□□□ 0.06
TRAPPC8-204ENST00000578252 NHSL1Q5SYE7 1610 aa15.4■□□□□ 0.06
TRAPPC8-204ENST00000578252 NGDNQ8NEJ9 315 aaKnown RBP15.4■□□□□ 0.06
TRAPPC8-204ENST00000578252 ORAI2Q96SN7 254 aa15.4■□□□□ 0.06
TRAPPC8-204ENST00000578252 ACEP12821 1306 aa15.4■□□□□ 0.06
TRAPPC8-204ENST00000578252 A0A1W2PP64 1363 aa15.39■□□□□ 0.05
TRAPPC8-204ENST00000578252 UBAP1LF5GYI3 381 aa15.39■□□□□ 0.05
TRAPPC8-204ENST00000578252 BRINP3Q76B58 766 aa15.39■□□□□ 0.05
TRAPPC8-204ENST00000578252 PMFBP1Q8TBY8 1022 aa15.39■□□□□ 0.05
TRAPPC8-204ENST00000578252 NRKQ7Z2Y5 1582 aa15.39■□□□□ 0.05
TRAPPC8-204ENST00000578252 NPHP3Q7Z494 1330 aa15.39■□□□□ 0.05
TRAPPC8-204ENST00000578252 KTN1Q86UP2 1357 aaKnown RBP15.38■□□□□ 0.05
TRAPPC8-204ENST00000578252 EDC4Q6P2E9 1401 aaKnown RBP15.38■□□□□ 0.05
TRAPPC8-204ENST00000578252 CLCN6P51797 869 aa15.38■□□□□ 0.05
TRAPPC8-204ENST00000578252 USP6P35125 1406 aa15.37■□□□□ 0.05
TRAPPC8-204ENST00000578252 AHDC1Q5TGY3 1603 aaPredicted RBP15.37■□□□□ 0.05
TRAPPC8-204ENST00000578252 DDX10Q13206 875 aaKnown RBP15.37■□□□□ 0.05
TRAPPC8-204ENST00000578252 PHF12Q96QT6 1004 aa15.37■□□□□ 0.05
TRAPPC8-204ENST00000578252 PANK3Q9H999 370 aa15.37■□□□□ 0.05
TRAPPC8-204ENST00000578252 TSPYL2Q9H2G4 693 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC8-204ENST00000578252 NSD3Q9BZ95 1437 aa15.35■□□□□ 0.05
TRAPPC8-204ENST00000578252 PSME1Q06323 249 aa15.35■□□□□ 0.05
TRAPPC8-204ENST00000578252 ZBTB47Q9UFB7 747 aaPredicted RBP15.35■□□□□ 0.05
TRAPPC8-204ENST00000578252 KIF20BQ96Q89 1820 aa15.35■□□□□ 0.05
TRAPPC8-204ENST00000578252 TRPM3Q9HCF6 1732 aaPredicted RBP15.34■□□□□ 0.05
TRAPPC8-204ENST00000578252 FOXO3O43524 673 aa15.34■□□□□ 0.05
TRAPPC8-204ENST00000578252 KNSTRNQ9Y448 316 aa15.34■□□□□ 0.05
TRAPPC8-204ENST00000578252 SSH2Q76I76 1423 aa15.34■□□□□ 0.05
TRAPPC8-204ENST00000578252 PXDNQ92626 1479 aa15.33■□□□□ 0.05
TRAPPC8-204ENST00000578252 TTC21AQ8NDW8 1320 aa15.33■□□□□ 0.04
TRAPPC8-204ENST00000578252 PHLPP1O60346 1717 aa15.32■□□□□ 0.04
TRAPPC8-204ENST00000578252 PIP4K2BP78356 416 aa15.32■□□□□ 0.04
TRAPPC8-204ENST00000578252 KRT28Q7Z3Y7 464 aa15.32■□□□□ 0.04
TRAPPC8-204ENST00000578252 CARD14Q9BXL6 1004 aa15.32■□□□□ 0.04
TRAPPC8-204ENST00000578252 CGNL1Q0VF96 1302 aa15.32■□□□□ 0.04
TRAPPC8-204ENST00000578252 SBNO1A3KN83 1393 aa15.32■□□□□ 0.04
TRAPPC8-204ENST00000578252 NSD2O96028 1365 aa15.32■□□□□ 0.04
TRAPPC8-204ENST00000578252 ANKRD26Q9UPS8 1709 aa15.31■□□□□ 0.04
TRAPPC8-204ENST00000578252 SOS2Q07890 1332 aaPredicted RBP15.31■□□□□ 0.04
TRAPPC8-204ENST00000578252 TTC21BQ7Z4L5 1316 aa15.31■□□□□ 0.04
TRAPPC8-204ENST00000578252 NPC1L1Q9UHC9 1359 aa15.31■□□□□ 0.04
TRAPPC8-204ENST00000578252 USP54Q70EL1 1684 aa15.31■□□□□ 0.04
TRAPPC8-204ENST00000578252 ALS2Q96Q42 1657 aa15.31■□□□□ 0.04
TRAPPC8-204ENST00000578252 PER1O15534 1290 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC8-204ENST00000578252 RASEFQ8IZ41 740 aa15.3■□□□□ 0.04
TRAPPC8-204ENST00000578252 PIK3C2AO00443 1686 aa15.29■□□□□ 0.04
TRAPPC8-204ENST00000578252 TNS3Q68CZ2 1445 aa15.29■□□□□ 0.04
TRAPPC8-204ENST00000578252 VASPP50552 380 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC8-204ENST00000578252 COL16A1Q07092 1604 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC8-204ENST00000578252 ARHGEF10O15013 1369 aa15.28■□□□□ 0.04
TRAPPC8-204ENST00000578252 GALR2O43603 387 aaPredicted RBP15.27■□□□□ 0.04
TRAPPC8-204ENST00000578252 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.27■□□□□ 0.04
TRAPPC8-204ENST00000578252 USP31Q70CQ4 1352 aa15.26■□□□□ 0.03
TRAPPC8-204ENST00000578252 SPATA31A3Q5VYP0 1347 aa15.26■□□□□ 0.03
TRAPPC8-204ENST00000578252 XPCQ01831 940 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC8-204ENST00000578252 AMER1Q5JTC6 1135 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC8-204ENST00000578252 DDX17Q92841 729 aaKnown RBP15.26■□□□□ 0.03
TRAPPC8-204ENST00000578252 MED1Q15648 1581 aaPredicted RBP15.25■□□□□ 0.03
TRAPPC8-204ENST00000578252 LRRC59Q96AG4 307 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms