RNA–Protein interactions for RNA: ENST00000577967.1

NF1-218, Transcript of neurofibromin 1, humanhuman

Gene NF1, Length 5,799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-218ENST00000577967 THUMPD2Q9BTF0 503 aaKnown RBP5.76□□□□□ -1.49
NF1-218ENST00000577967 ATP10AO60312 1499 aa5.76□□□□□ -1.49
NF1-218ENST00000577967 SLFN5Q08AF3 891 aa5.76□□□□□ -1.49
NF1-218ENST00000577967 DCTN1Q14203 1278 aa5.76□□□□□ -1.49
NF1-218ENST00000577967 PPIP5K1Q6PFW1 1433 aa5.76□□□□□ -1.49
NF1-218ENST00000577967 ARHGEF12Q9NZN5 1544 aa5.76□□□□□ -1.49
NF1-218ENST00000577967 CCDC30Q5VVM6 783 aa5.76□□□□□ -1.49
NF1-218ENST00000577967 MCM10Q7L590 875 aa5.76□□□□□ -1.49
NF1-218ENST00000577967 TRIM44Q96DX7 344 aaPredicted RBP5.76□□□□□ -1.49
NF1-218ENST00000577967 LNPKQ9C0E8 428 aa5.76□□□□□ -1.49
NF1-218ENST00000577967 HDAC5Q9UQL6 1122 aa5.76□□□□□ -1.49
NF1-218ENST00000577967 CCDC61Q9Y6R9 512 aa5.76□□□□□ -1.49
NF1-218ENST00000577967 CROCC2H7BZ55 1655 aa5.76□□□□□ -1.49
NF1-218ENST00000577967 MSH5O43196 834 aa5.76□□□□□ -1.49
NF1-218ENST00000577967 TMPOP42166 694 aaKnown RBP5.76□□□□□ -1.49
NF1-218ENST00000577967 ZC3H6P61129 1189 aaKnown RBP5.76□□□□□ -1.49
NF1-218ENST00000577967 PLCB2Q00722 1185 aa5.76□□□□□ -1.49
NF1-218ENST00000577967 ZRSR1Q15695 479 aaKnown RBP5.76□□□□□ -1.49
NF1-218ENST00000577967 DDX58O95786 925 aaKnown RBP5.76□□□□□ -1.49
NF1-218ENST00000577967 TATP17735 454 aaPredicted RBP5.76□□□□□ -1.49
NF1-218ENST00000577967 GTF2E1P29083 439 aaPredicted RBP5.76□□□□□ -1.49
NF1-218ENST00000577967 TOM1L2Q6ZVM7 507 aa5.76□□□□□ -1.49
NF1-218ENST00000577967 GZF1Q9H116 711 aaPredicted RBP5.76□□□□□ -1.49
NF1-218ENST00000577967 CFAP65Q6ZU64 1925 aaKnown RBP5.76□□□□□ -1.49
NF1-218ENST00000577967 ABCC1P33527 1531 aa5.76□□□□□ -1.49
NF1-218ENST00000577967 SLC4A2P04920 1241 aa5.75□□□□□ -1.49
NF1-218ENST00000577967 PTMAP06454 111 aaKnown RBP5.75□□□□□ -1.49
NF1-218ENST00000577967 DDX54Q8TDD1 881 aaKnown RBP5.75□□□□□ -1.49
NF1-218ENST00000577967 RBM42Q9BTD8 480 aaKnown RBP5.75□□□□□ -1.49
NF1-218ENST00000577967 ISY1Q9ULR0 285 aaKnown RBP5.75□□□□□ -1.49
NF1-218ENST00000577967 ZMYM3Q14202 1370 aa5.75□□□□□ -1.49
NF1-218ENST00000577967 NFE2L2Q16236 605 aa5.75□□□□□ -1.49
NF1-218ENST00000577967 FCHSD2O94868 740 aa5.75□□□□□ -1.49
NF1-218ENST00000577967 CABP4P57796 275 aa5.75□□□□□ -1.49
NF1-218ENST00000577967 ZNF530Q6P9A1 599 aaPredicted RBP5.75□□□□□ -1.49
NF1-218ENST00000577967 ACEP12821 1306 aa5.75□□□□□ -1.49
NF1-218ENST00000577967 BTBD11A6QL63 1104 aa5.74□□□□□ -1.49
NF1-218ENST00000577967 IFIT2P09913 472 aaKnown RBP5.74□□□□□ -1.49
NF1-218ENST00000577967 SHROOM2Q13796 1616 aa5.74□□□□□ -1.49
NF1-218ENST00000577967 MYL6BP14649 208 aa5.74□□□□□ -1.49
NF1-218ENST00000577967 GNL2Q13823 731 aaKnown RBP5.74□□□□□ -1.49
NF1-218ENST00000577967 ZRANB1Q9UGI0 708 aa5.74□□□□□ -1.49
NF1-218ENST00000577967 MBD5Q9P267 1494 aa5.74□□□□□ -1.49
NF1-218ENST00000577967 UBTFL1P0CB47 393 aaPredicted RBP5.74□□□□□ -1.49
NF1-218ENST00000577967 NCKAP5LQ9HCH0 1330 aa5.74□□□□□ -1.49
NF1-218ENST00000577967 RTN4Q9NQC3 1192 aaKnown RBP5.74□□□□□ -1.49
NF1-218ENST00000577967 PDZRN3Q9UPQ7 1066 aa5.74□□□□□ -1.49
NF1-218ENST00000577967 GNAT3A8MTJ3 354 aa5.74□□□□□ -1.49
NF1-218ENST00000577967 DEKP35659 375 aaKnown RBP5.74□□□□□ -1.49
NF1-218ENST00000577967 C20orf194Q5TEA3 1177 aa5.74□□□□□ -1.49
NF1-218ENST00000577967 TMX4Q9H1E5 349 aaPredicted RBP5.74□□□□□ -1.49
NF1-218ENST00000577967 PHF8Q9UPP1 1060 aa5.74□□□□□ -1.49
NF1-218ENST00000577967 SPG7Q9UQ90 795 aa5.74□□□□□ -1.49
NF1-218ENST00000577967 UGGT1Q9NYU2 1555 aa5.74□□□□□ -1.49
NF1-218ENST00000577967 YEATS2Q9ULM3 1422 aa5.73□□□□□ -1.49
NF1-218ENST00000577967 GOLGA6L4A6NEF3 574 aa5.73□□□□□ -1.49
NF1-218ENST00000577967 G3V3G9 751 aa5.73□□□□□ -1.49
NF1-218ENST00000577967 G3BP1Q13283 466 aaKnown RBP eCLIP5.73□□□□□ -1.49
NF1-218ENST00000577967 DCAF8Q5TAQ9 597 aa5.73□□□□□ -1.49
NF1-218ENST00000577967 UHRF1BP1Q6BDS2 1440 aa5.73□□□□□ -1.49
NF1-218ENST00000577967 FAM177BA6PVY3 158 aa5.73□□□□□ -1.49
NF1-218ENST00000577967 FRAT2O75474 233 aaPredicted RBP5.73□□□□□ -1.49
NF1-218ENST00000577967 NKTRP30414 1462 aaKnown RBP5.73□□□□□ -1.49
NF1-218ENST00000577967 KDM5AP29375 1690 aaKnown RBP5.73□□□□□ -1.49
NF1-218ENST00000577967 HECW2Q9P2P5 1572 aa5.73□□□□□ -1.49
NF1-218ENST00000577967 CDC42BPBQ9Y5S2 1711 aa5.73□□□□□ -1.49
NF1-218ENST00000577967 GBP4Q96PP9 640 aa5.72□□□□□ -1.49
NF1-218ENST00000577967 DIAPH3Q9NSV4 1193 aa5.72□□□□□ -1.49
NF1-218ENST00000577967 KIF1BO60333 1816 aa5.72□□□□□ -1.49
NF1-218ENST00000577967 FOXO3O43524 673 aa5.72□□□□□ -1.49
NF1-218ENST00000577967 MAP4K4O95819 1239 aaPredicted RBP5.72□□□□□ -1.49
NF1-218ENST00000577967 NSD2O96028 1365 aa5.72□□□□□ -1.49
NF1-218ENST00000577967 ANKRD36BQ8N2N9 1353 aa5.72□□□□□ -1.49
NF1-218ENST00000577967 NEO1Q92859 1461 aa5.72□□□□□ -1.49
NF1-218ENST00000577967 ST18O60284 1047 aa5.72□□□□□ -1.49
NF1-218ENST00000577967 MVPQ14764 893 aaKnown RBP5.72□□□□□ -1.49
NF1-218ENST00000577967 KRT28Q7Z3Y7 464 aa5.72□□□□□ -1.49
NF1-218ENST00000577967 ANO2Q9NQ90 1003 aa5.72□□□□□ -1.49
NF1-218ENST00000577967 NINLQ9Y2I6 1382 aa5.72□□□□□ -1.49
NF1-218ENST00000577967 COL17A1Q9UMD9 1497 aaPredicted RBP5.72□□□□□ -1.49
NF1-218ENST00000577967 NPATQ14207 1427 aa5.72□□□□□ -1.49
NF1-218ENST00000577967 YTHDC2Q9H6S0 1430 aaKnown RBP5.72□□□□□ -1.49
NF1-218ENST00000577967 SKAP1Q86WV1 359 aa5.72□□□□□ -1.49
NF1-218ENST00000577967 TESK2Q96S53 571 aa5.72□□□□□ -1.49
NF1-218ENST00000577967 TOMM22Q9NS69 142 aa5.72□□□□□ -1.49
NF1-218ENST00000577967 FANCIQ9NVI1 1328 aa5.72□□□□□ -1.49
NF1-218ENST00000577967 FAM83GA6ND36 823 aa5.72□□□□□ -1.49
NF1-218ENST00000577967 HDGFL1Q5TGJ6 251 aa5.72□□□□□ -1.49
NF1-218ENST00000577967 KIF6Q6ZMV9 814 aa5.72□□□□□ -1.49
NF1-218ENST00000577967 KCNH5Q8NCM2 988 aa5.72□□□□□ -1.49
NF1-218ENST00000577967 TMEM57Q8N5G2 664 aa5.71□□□□□ -1.49
NF1-218ENST00000577967 PDE3AQ14432 1141 aa5.71□□□□□ -1.5
NF1-218ENST00000577967 ATF7IPQ6VMQ6 1270 aa5.71□□□□□ -1.5
NF1-218ENST00000577967 NEUROD6Q96NK8 337 aa5.71□□□□□ -1.5
NF1-218ENST00000577967 CARD14Q9BXL6 1004 aa5.71□□□□□ -1.5
NF1-218ENST00000577967 KDM5CP41229 1560 aa5.71□□□□□ -1.5
NF1-218ENST00000577967 FOXD4L6Q3SYB3 417 aaPredicted RBP5.71□□□□□ -1.5
NF1-218ENST00000577967 FOXD4L3Q6VB84 417 aaPredicted RBP5.71□□□□□ -1.5
NF1-218ENST00000577967 FBXW7Q969H0 707 aa5.71□□□□□ -1.5
NF1-218ENST00000577967 IFT57Q9NWB7 429 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms