RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 TMC1Q8TDI8 760 aa17.61■□□□□ 0.41
MKS1-206ENST00000577824 KTN1Q86UP2 1357 aaKnown RBP17.61■□□□□ 0.41
MKS1-206ENST00000577824 HDGFL2Q7Z4V5 671 aaPredicted RBP17.6■□□□□ 0.41
MKS1-206ENST00000577824 DDX17Q92841 729 aaKnown RBP17.6■□□□□ 0.41
MKS1-206ENST00000577824 CRYBG1Q9Y4K1 1723 aa17.6■□□□□ 0.41
MKS1-206ENST00000577824 KRT28Q7Z3Y7 464 aa17.59■□□□□ 0.41
MKS1-206ENST00000577824 SPATA31A3Q5VYP0 1347 aa17.58■□□□□ 0.4
MKS1-206ENST00000577824 PSME1Q06323 249 aa17.58■□□□□ 0.4
MKS1-206ENST00000577824 MARF1Q9Y4F3 1742 aaKnown RBP17.58■□□□□ 0.4
MKS1-206ENST00000577824 ARHGEF10O15013 1369 aa17.57■□□□□ 0.4
MKS1-206ENST00000577824 TTC21AQ8NDW8 1320 aa17.57■□□□□ 0.4
MKS1-206ENST00000577824 ABCA3Q99758 1704 aa17.57■□□□□ 0.4
MKS1-206ENST00000577824 NSD3Q9BZ95 1437 aa17.56■□□□□ 0.4
MKS1-206ENST00000577824 PNPLA6Q8IY17 1366 aa17.56■□□□□ 0.4
MKS1-206ENST00000577824 ZNF316A6NFI3 1004 aaPredicted RBP17.56■□□□□ 0.4
MKS1-206ENST00000577824 HSPA1LP34931 641 aa17.56■□□□□ 0.4
MKS1-206ENST00000577824 KIF20BQ96Q89 1820 aa17.56■□□□□ 0.4
MKS1-206ENST00000577824 TTC21BQ7Z4L5 1316 aa17.55■□□□□ 0.4
MKS1-206ENST00000577824 XPCQ01831 940 aaPredicted RBP17.55■□□□□ 0.4
MKS1-206ENST00000577824 LRRC59Q96AG4 307 aaKnown RBP17.55■□□□□ 0.4
MKS1-206ENST00000577824 CARD14Q9BXL6 1004 aa17.55■□□□□ 0.4
MKS1-206ENST00000577824 OVOS2A0A0J9YW53 1432 aa17.55■□□□□ 0.4
MKS1-206ENST00000577824 OVOS2Q6IE36 1432 aa17.55■□□□□ 0.4
MKS1-206ENST00000577824 PHRF1Q9P1Y6 1649 aaKnown RBP17.54■□□□□ 0.4
MKS1-206ENST00000577824 JCADQ9P266 1359 aa17.54■□□□□ 0.4
MKS1-206ENST00000577824 SLIT3O75094 1523 aa17.54■□□□□ 0.4
MKS1-206ENST00000577824 POLR3GLQ9BT43 218 aa17.54■□□□□ 0.4
MKS1-206ENST00000577824 ANKRD26Q9UPS8 1709 aa17.54■□□□□ 0.4
MKS1-206ENST00000577824 USP31Q70CQ4 1352 aa17.53■□□□□ 0.4
MKS1-206ENST00000577824 PANK3Q9H999 370 aa17.53■□□□□ 0.4
MKS1-206ENST00000577824 USP19O94966 1318 aa17.52■□□□□ 0.4
MKS1-206ENST00000577824 NSD2O96028 1365 aa17.52■□□□□ 0.39
MKS1-206ENST00000577824 NPC1L1Q9UHC9 1359 aa17.51■□□□□ 0.39
MKS1-206ENST00000577824 PER1O15534 1290 aaPredicted RBP17.5■□□□□ 0.39
MKS1-206ENST00000577824 CGNL1Q0VF96 1302 aa17.48■□□□□ 0.39
MKS1-206ENST00000577824 NFAT5O94916 1531 aa17.48■□□□□ 0.39
MKS1-206ENST00000577824 SPATA31A6Q5VVP1 1343 aa17.47■□□□□ 0.39
MKS1-206ENST00000577824 PAK3O75914 559 aaPredicted RBP17.47■□□□□ 0.39
MKS1-206ENST00000577824 FYB1O15117 783 aa17.46■□□□□ 0.39
MKS1-206ENST00000577824 AMER1Q5JTC6 1135 aaPredicted RBP17.46■□□□□ 0.39
MKS1-206ENST00000577824 NME9Q86XW9 330 aa17.46■□□□□ 0.39
MKS1-206ENST00000577824 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.46■□□□□ 0.39
MKS1-206ENST00000577824 ABTB2Q8N961 1025 aa17.46■□□□□ 0.39
MKS1-206ENST00000577824 LRP6O75581 1613 aa17.45■□□□□ 0.38
MKS1-206ENST00000577824 ABCC6O95255 1503 aa17.44■□□□□ 0.38
MKS1-206ENST00000577824 NLRP13Q86W25 1043 aa17.44■□□□□ 0.38
MKS1-206ENST00000577824 KNSTRNQ9Y448 316 aa17.44■□□□□ 0.38
MKS1-206ENST00000577824 ILDR1Q86SU0 546 aaPredicted RBP17.43■□□□□ 0.38
MKS1-206ENST00000577824 NLRP6P59044 892 aa17.42■□□□□ 0.38
MKS1-206ENST00000577824 CPDO75976 1380 aa17.41■□□□□ 0.38
MKS1-206ENST00000577824 DDX10Q13206 875 aaKnown RBP17.41■□□□□ 0.38
MKS1-206ENST00000577824 LMOD2Q6P5Q4 547 aa17.4■□□□□ 0.38
MKS1-206ENST00000577824 COG3Q96JB2 828 aa17.4■□□□□ 0.38
MKS1-206ENST00000577824 GGNBP2Q9H3C7 697 aa17.4■□□□□ 0.38
MKS1-206ENST00000577824 ZRANB1Q9UGI0 708 aa17.4■□□□□ 0.38
MKS1-206ENST00000577824 AATKQ6ZMQ8 1374 aa17.4■□□□□ 0.38
MKS1-206ENST00000577824 LMO7Q8WWI1 1683 aa17.39■□□□□ 0.37
MKS1-206ENST00000577824 NUTM2GQ5VZR2 741 aa17.39■□□□□ 0.37
MKS1-206ENST00000577824 SMG6Q86US8 1419 aaKnown RBP17.38■□□□□ 0.37
MKS1-206ENST00000577824 GCP02774 474 aa17.38■□□□□ 0.37
MKS1-206ENST00000577824 KCNH5Q8NCM2 988 aa17.38■□□□□ 0.37
MKS1-206ENST00000577824 COL14A1Q05707 1796 aaKnown RBP17.38■□□□□ 0.37
MKS1-206ENST00000577824 LTN1O94822 1766 aa17.37■□□□□ 0.37
MKS1-206ENST00000577824 PLCH1Q4KWH8 1693 aa17.36■□□□□ 0.37
MKS1-206ENST00000577824 COL18A1P39060 1754 aa17.36■□□□□ 0.37
MKS1-206ENST00000577824 CABLES1Q8TDN4 633 aa17.36■□□□□ 0.37
MKS1-206ENST00000577824 PARD3Q8TEW0 1356 aa17.36■□□□□ 0.37
MKS1-206ENST00000577824 NWD2Q9ULI1 1742 aa17.35■□□□□ 0.37
MKS1-206ENST00000577824 RTL1A6NKG5 1358 aa17.35■□□□□ 0.37
MKS1-206ENST00000577824 KIF24Q5T7B8 1368 aa17.35■□□□□ 0.37
MKS1-206ENST00000577824 SLIT2O94813 1529 aa17.34■□□□□ 0.37
MKS1-206ENST00000577824 KIAA0232Q92628 1395 aa17.34■□□□□ 0.37
MKS1-206ENST00000577824 NRAPQ86VF7 1730 aa17.33■□□□□ 0.37
MKS1-206ENST00000577824 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.33■□□□□ 0.37
MKS1-206ENST00000577824 PEAK1Q9H792 1746 aa17.33■□□□□ 0.37
MKS1-206ENST00000577824 ARHGEF25Q86VW2 580 aa17.33■□□□□ 0.36
MKS1-206ENST00000577824 CDK12Q9NYV4 1490 aaPredicted RBP17.31■□□□□ 0.36
MKS1-206ENST00000577824 BLMP54132 1417 aaPredicted RBP17.3■□□□□ 0.36
MKS1-206ENST00000577824 MAP3K19Q56UN5 1328 aa17.3■□□□□ 0.36
MKS1-206ENST00000577824 HAP1P54257 671 aaPredicted RBP17.3■□□□□ 0.36
MKS1-206ENST00000577824 CC2D1BQ5T0F9 858 aaKnown RBP17.3■□□□□ 0.36
MKS1-206ENST00000577824 MORC1Q86VD1 984 aa17.3■□□□□ 0.36
MKS1-206ENST00000577824 NUTM2BA6NNL0 878 aaPredicted RBP17.29■□□□□ 0.36
MKS1-206ENST00000577824 NUTM2EB1AL46 878 aaPredicted RBP17.29■□□□□ 0.36
MKS1-206ENST00000577824 NUTM2AQ8IVF1 878 aaPredicted RBP17.29■□□□□ 0.36
MKS1-206ENST00000577824 CAMTA1Q9Y6Y1 1673 aa17.29■□□□□ 0.36
MKS1-206ENST00000577824 FLT4P35916 1363 aa17.28■□□□□ 0.36
MKS1-206ENST00000577824 MAP2P11137 1827 aaKnown RBP17.28■□□□□ 0.36
MKS1-206ENST00000577824 FAM208AQ9UK61 1670 aaKnown RBP17.27■□□□□ 0.36
MKS1-206ENST00000577824 COL5A2P05997 1499 aaPredicted RBP17.27■□□□□ 0.36
MKS1-206ENST00000577824 ZC3H6P61129 1189 aaKnown RBP17.27■□□□□ 0.36
MKS1-206ENST00000577824 FNBP4Q8N3X1 1017 aaPredicted RBP17.27■□□□□ 0.36
MKS1-206ENST00000577824 PRDM11Q9NQV5 511 aa17.27■□□□□ 0.36
MKS1-206ENST00000577824 POLKQ9UBT6 870 aa17.27■□□□□ 0.36
MKS1-206ENST00000577824 BCL9LQ86UU0 1499 aa17.26■□□□□ 0.35
MKS1-206ENST00000577824 FAM83GA6ND36 823 aa17.26■□□□□ 0.35
MKS1-206ENST00000577824 ADAMTS2O95450 1211 aa17.26■□□□□ 0.35
MKS1-206ENST00000577824 RALBP1Q15311 655 aa17.26■□□□□ 0.35
MKS1-206ENST00000577824 INSRP06213 1382 aa17.26■□□□□ 0.35
MKS1-206ENST00000577824 COL3A1P02461 1466 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms