RNA–Protein interactions for RNA: ENST00000577645.5

NUP85-206, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 869 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-206	ENST00000577645	CDK19	Q9BWU1	502 aa		13.78	□□□□□ -0.2
NUP85-206	ENST00000577645	PPIP5K1	Q6PFW1	1433 aa		13.78	□□□□□ -0.2
NUP85-206	ENST00000577645	USP54	Q70EL1	1684 aa		13.78	□□□□□ -0.2
NUP85-206	ENST00000577645	NGDN	Q8NEJ9	315 aa	Known RBP	13.77	□□□□□ -0.21
NUP85-206	ENST00000577645	NINL	Q9Y2I6	1382 aa		13.77	□□□□□ -0.21
NUP85-206	ENST00000577645	PLEKHG3	A1L390	1219 aa		13.76	□□□□□ -0.21
NUP85-206	ENST00000577645	SRPK2	P78362	688 aa	Known RBP	13.76	□□□□□ -0.21
NUP85-206	ENST00000577645	NBPF8	Q3BBV2	869 aa		13.76	□□□□□ -0.21
NUP85-206	ENST00000577645	PUS7	Q96PZ0	661 aa	Known RBP	13.76	□□□□□ -0.21
NUP85-206	ENST00000577645	FOXD4L1	Q9NU39	408 aa		13.76	□□□□□ -0.21
NUP85-206	ENST00000577645	HOXD11	P31277	338 aa	Predicted RBP	13.75	□□□□□ -0.21
NUP85-206	ENST00000577645	NRAP	Q86VF7	1730 aa		13.74	□□□□□ -0.21
NUP85-206	ENST00000577645	USP6	P35125	1406 aa		13.73	□□□□□ -0.21
NUP85-206	ENST00000577645	AFF2	P51816	1311 aa		13.73	□□□□□ -0.21
NUP85-206	ENST00000577645	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.73	□□□□□ -0.21
NUP85-206	ENST00000577645	NUTM2E	B1AL46	878 aa	Predicted RBP	13.73	□□□□□ -0.21
NUP85-206	ENST00000577645	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.73	□□□□□ -0.21
NUP85-206	ENST00000577645	PMFBP1	Q8TBY8	1022 aa		13.73	□□□□□ -0.21
NUP85-206	ENST00000577645	SLIT2	O94813	1529 aa		13.73	□□□□□ -0.21
NUP85-206	ENST00000577645	POTEA	Q6S8J7	498 aa		13.72	□□□□□ -0.21
NUP85-206	ENST00000577645	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.72	□□□□□ -0.21
NUP85-206	ENST00000577645	PIK3C2A	O00443	1686 aa		13.72	□□□□□ -0.21
NUP85-206	ENST00000577645	ACE	P12821	1306 aa		13.71	□□□□□ -0.21
NUP85-206	ENST00000577645	ABCC6	O95255	1503 aa		13.71	□□□□□ -0.21
NUP85-206	ENST00000577645	HAP1	P54257	671 aa	Predicted RBP	13.71	□□□□□ -0.21
NUP85-206	ENST00000577645	XPC	Q01831	940 aa	Predicted RBP	13.71	□□□□□ -0.21
NUP85-206	ENST00000577645	C8orf37	Q96NL8	207 aa		13.71	□□□□□ -0.21
NUP85-206	ENST00000577645	USP47	Q96K76	1375 aa		13.71	□□□□□ -0.22
NUP85-206	ENST00000577645	NGLY1	Q96IV0	654 aa		13.7	□□□□□ -0.22
NUP85-206	ENST00000577645	ZNF692	Q9BU19	519 aa	Predicted RBP	13.7	□□□□□ -0.22
NUP85-206	ENST00000577645	ATRN	O75882	1429 aa		13.7	□□□□□ -0.22
NUP85-206	ENST00000577645	SLIT3	O75094	1523 aa		13.69	□□□□□ -0.22
NUP85-206	ENST00000577645	TRPC5	Q9UL62	973 aa	Predicted RBP	13.69	□□□□□ -0.22
NUP85-206	ENST00000577645	CPSF1	Q10570	1443 aa	Known RBP	13.69	□□□□□ -0.22
NUP85-206	ENST00000577645	TTC21A	Q8NDW8	1320 aa		13.68	□□□□□ -0.22
NUP85-206	ENST00000577645	ADAMTS2	O95450	1211 aa		13.68	□□□□□ -0.22
NUP85-206	ENST00000577645	CDCA8	Q53HL2	280 aa		13.68	□□□□□ -0.22
NUP85-206	ENST00000577645	SSH2	Q76I76	1423 aa		13.67	□□□□□ -0.22
NUP85-206	ENST00000577645	RBM6	P78332	1123 aa	Known RBP	13.67	□□□□□ -0.22
NUP85-206	ENST00000577645	CABP2	Q9NPB3	220 aa		13.67	□□□□□ -0.22
NUP85-206	ENST00000577645	USP21	Q9UK80	565 aa		13.67	□□□□□ -0.22
NUP85-206	ENST00000577645	BCL9L	Q86UU0	1499 aa		13.67	□□□□□ -0.22
NUP85-206	ENST00000577645	USP19	O94966	1318 aa		13.66	□□□□□ -0.22
NUP85-206	ENST00000577645	LMO7	Q8WWI1	1683 aa		13.66	□□□□□ -0.22
NUP85-206	ENST00000577645	PAK3	O75914	559 aa	Predicted RBP	13.66	□□□□□ -0.22
NUP85-206	ENST00000577645	RXRB	P28702	533 aa		13.66	□□□□□ -0.22
NUP85-206	ENST00000577645	LMOD2	Q6P5Q4	547 aa		13.66	□□□□□ -0.22
NUP85-206	ENST00000577645	CPD	O75976	1380 aa		13.66	□□□□□ -0.22
NUP85-206	ENST00000577645	MYOM1	P52179	1685 aa		13.66	□□□□□ -0.22
NUP85-206	ENST00000577645	EDC4	Q6P2E9	1401 aa	Known RBP	13.65	□□□□□ -0.22
NUP85-206	ENST00000577645	ZEB1	P37275	1124 aa	Predicted RBP	13.65	□□□□□ -0.22
NUP85-206	ENST00000577645	NLRP13	Q86W25	1043 aa		13.65	□□□□□ -0.22
NUP85-206	ENST00000577645	TMF1	P82094	1093 aa		13.64	□□□□□ -0.23
NUP85-206	ENST00000577645	KIF20B	Q96Q89	1820 aa		13.64	□□□□□ -0.23
NUP85-206	ENST00000577645	GLI3	P10071	1580 aa		13.63	□□□□□ -0.23
NUP85-206	ENST00000577645	KTN1	Q86UP2	1357 aa	Known RBP	13.63	□□□□□ -0.23
NUP85-206	ENST00000577645	UNC5CL	Q8IV45	518 aa		13.63	□□□□□ -0.23
NUP85-206	ENST00000577645	ABTB2	Q8N961	1025 aa		13.63	□□□□□ -0.23
NUP85-206	ENST00000577645	TESK2	Q96S53	571 aa		13.63	□□□□□ -0.23
NUP85-206	ENST00000577645	TERF2IP	Q9NYB0	399 aa		13.63	□□□□□ -0.23
NUP85-206	ENST00000577645	CABP1	Q9NZU7	370 aa		13.63	□□□□□ -0.23
NUP85-206	ENST00000577645	RGS12	O14924	1447 aa		13.63	□□□□□ -0.23
NUP85-206	ENST00000577645	CD163L1	Q9NR16	1453 aa		13.62	□□□□□ -0.23
NUP85-206	ENST00000577645	ST20-MTHFS	A0A0A6YYL1	179 aa		13.62	□□□□□ -0.23
NUP85-206	ENST00000577645	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.62	□□□□□ -0.23
NUP85-206	ENST00000577645	QTRT2	Q9H974	415 aa	Known RBP	13.62	□□□□□ -0.23
NUP85-206	ENST00000577645	LTN1	O94822	1766 aa		13.62	□□□□□ -0.23
NUP85-206	ENST00000577645	FAM208A	Q9UK61	1670 aa	Known RBP	13.62	□□□□□ -0.23
NUP85-206	ENST00000577645	ANKRD36B	Q8N2N9	1353 aa		13.61	□□□□□ -0.23
NUP85-206	ENST00000577645	WNK3	Q9BYP7	1800 aa		13.61	□□□□□ -0.23
NUP85-206	ENST00000577645	VPS72	Q15906	364 aa		13.6	□□□□□ -0.23
NUP85-206	ENST00000577645	KCNH5	Q8NCM2	988 aa		13.6	□□□□□ -0.23
NUP85-206	ENST00000577645	PRDM11	Q9NQV5	511 aa		13.6	□□□□□ -0.23
NUP85-206	ENST00000577645	THSD7A	Q9UPZ6	1657 aa		13.59	□□□□□ -0.23
NUP85-206	ENST00000577645		A0A1W2PP64	1363 aa		13.59	□□□□□ -0.23
NUP85-206	ENST00000577645	USP31	Q70CQ4	1352 aa		13.59	□□□□□ -0.23
NUP85-206	ENST00000577645	BRWD3	Q6RI45	1802 aa		13.59	□□□□□ -0.23
NUP85-206	ENST00000577645	TTC21B	Q7Z4L5	1316 aa		13.59	□□□□□ -0.23
NUP85-206	ENST00000577645	NFAT5	O94916	1531 aa		13.59	□□□□□ -0.23
NUP85-206	ENST00000577645	KIAA0232	Q92628	1395 aa		13.58	□□□□□ -0.23
NUP85-206	ENST00000577645	COL18A1	P39060	1754 aa		13.58	□□□□□ -0.23
NUP85-206	ENST00000577645	GJD4	Q96KN9	370 aa	Predicted RBP	13.58	□□□□□ -0.24
NUP85-206	ENST00000577645	ANKRD26	Q9UPS8	1709 aa		13.58	□□□□□ -0.24
NUP85-206	ENST00000577645	OVOS2	A0A0J9YW53	1432 aa		13.57	□□□□□ -0.24
NUP85-206	ENST00000577645	OVOS2	Q6IE36	1432 aa		13.57	□□□□□ -0.24
NUP85-206	ENST00000577645	PARP4	Q9UKK3	1724 aa	Known RBP	13.57	□□□□□ -0.24
NUP85-206	ENST00000577645	CABLES1	Q8TDN4	633 aa		13.57	□□□□□ -0.24
NUP85-206	ENST00000577645	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
NUP85-206	ENST00000577645	AATK	Q6ZMQ8	1374 aa		13.56	□□□□□ -0.24
NUP85-206	ENST00000577645	COL5A2	P05997	1499 aa	Predicted RBP	13.55	□□□□□ -0.24
NUP85-206	ENST00000577645	GC	P02774	474 aa		13.55	□□□□□ -0.24
NUP85-206	ENST00000577645	NLRP6	P59044	892 aa		13.55	□□□□□ -0.24
NUP85-206	ENST00000577645	TMC1	Q8TDI8	760 aa		13.55	□□□□□ -0.24
NUP85-206	ENST00000577645	UPF1	Q92900	1129 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
NUP85-206	ENST00000577645	RGPD5	Q99666	1765 aa		13.55	□□□□□ -0.24
NUP85-206	ENST00000577645	EP400	Q96L91	3159 aa		13.54	□□□□□ -0.24
NUP85-206	ENST00000577645	FAM83G	A6ND36	823 aa		13.54	□□□□□ -0.24
NUP85-206	ENST00000577645	BTG4	Q9NY30	223 aa		13.54	□□□□□ -0.24
NUP85-206	ENST00000577645	CAMTA1	Q9Y6Y1	1673 aa		13.53	□□□□□ -0.24
NUP85-206	ENST00000577645	RGPD1	P0DJD0	1748 aa		13.53	□□□□□ -0.24

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