RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 EDC4Q6P2E9 1401 aaKnown RBP18.21■□□□□ 0.5
RNF43-202ENST00000577625 PPP4R2Q9NY27 417 aa18.2■□□□□ 0.5
RNF43-202ENST00000577625 RGPD8O14715 1765 aaPredicted RBP18.2■□□□□ 0.5
RNF43-202ENST00000577625 RTL5Q5HYW3 569 aaPredicted RBP18.2■□□□□ 0.5
RNF43-202ENST00000577625 MTHFSP49914 203 aa18.19■□□□□ 0.5
RNF43-202ENST00000577625 NRKQ7Z2Y5 1582 aa18.19■□□□□ 0.5
RNF43-202ENST00000577625 NKTRP30414 1462 aaKnown RBP18.18■□□□□ 0.5
RNF43-202ENST00000577625 KCNA6P17658 529 aa18.17■□□□□ 0.5
RNF43-202ENST00000577625 IL27Q8NEV9 243 aa18.17■□□□□ 0.5
RNF43-202ENST00000577625 MAP2P11137 1827 aaKnown RBP18.16■□□□□ 0.5
RNF43-202ENST00000577625 NALCNQ8IZF0 1738 aa18.16■□□□□ 0.5
RNF43-202ENST00000577625 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.15■□□□□ 0.54e-7■■□□□ 12.9
RNF43-202ENST00000577625 FMN2Q9NZ56 1722 aa18.15■□□□□ 0.5
RNF43-202ENST00000577625 NPHP4O75161 1426 aaPredicted RBP18.15■□□□□ 0.5
RNF43-202ENST00000577625 COL3A1P02461 1466 aaPredicted RBP18.15■□□□□ 0.5
RNF43-202ENST00000577625 PAK3O75914 559 aaPredicted RBP18.15■□□□□ 0.5
RNF43-202ENST00000577625 CFAP53Q96M91 514 aa18.14■□□□□ 0.49
RNF43-202ENST00000577625 CCDC146Q8IYE0 955 aa18.13■□□□□ 0.49
RNF43-202ENST00000577625 RNF123Q5XPI4 1314 aa18.13■□□□□ 0.49
RNF43-202ENST00000577625 PLEKHG3A1L390 1219 aa18.12■□□□□ 0.49
RNF43-202ENST00000577625 NUTM2FA1L443 756 aa18.12■□□□□ 0.49
RNF43-202ENST00000577625 IRX6P78412 446 aaPredicted RBP18.11■□□□□ 0.49
RNF43-202ENST00000577625 ZNF692Q9BU19 519 aaPredicted RBP18.11■□□□□ 0.49
RNF43-202ENST00000577625 NME9Q86XW9 330 aa18.11■□□□□ 0.49
RNF43-202ENST00000577625 ZNF521Q96K83 1311 aa18.11■□□□□ 0.49
RNF43-202ENST00000577625 CDCA7LQ96GN5 454 aa18.1■□□□□ 0.49
RNF43-202ENST00000577625 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.1■□□□□ 0.49
RNF43-202ENST00000577625 ACEP12821 1306 aa18.1■□□□□ 0.49
RNF43-202ENST00000577625 USP6P35125 1406 aa18.1■□□□□ 0.49
RNF43-202ENST00000577625 NWD1Q149M9 1564 aa18.09■□□□□ 0.49
RNF43-202ENST00000577625 ANKARQ7Z5J8 1434 aa18.09■□□□□ 0.49
RNF43-202ENST00000577625 IQSEC2Q5JU85 1478 aa18.09■□□□□ 0.49
RNF43-202ENST00000577625 APAF1O14727 1248 aa18.08■□□□□ 0.49
RNF43-202ENST00000577625 PNPLA6Q8IY17 1366 aa18.08■□□□□ 0.48
RNF43-202ENST00000577625 NGEFQ8N5V2 710 aa18.08■□□□□ 0.48
RNF43-202ENST00000577625 ZRANB1Q9UGI0 708 aa18.07■□□□□ 0.48
RNF43-202ENST00000577625 RTN4Q9NQC3 1192 aaKnown RBP18.06■□□□□ 0.48
RNF43-202ENST00000577625 SSH2Q76I76 1423 aa18.06■□□□□ 0.48
RNF43-202ENST00000577625 IPO9Q96P70 1041 aaKnown RBP18.06■□□□□ 0.48
RNF43-202ENST00000577625 TTC21BQ7Z4L5 1316 aa18.05■□□□□ 0.48
RNF43-202ENST00000577625 AATKQ6ZMQ8 1374 aa18.05■□□□□ 0.48
RNF43-202ENST00000577625 POLKQ9UBT6 870 aa18.04■□□□□ 0.48
RNF43-202ENST00000577625 ADGRL3Q9HAR2 1447 aa18.04■□□□□ 0.48
RNF43-202ENST00000577625 OVOS2A0A0J9YW53 1432 aa18.04■□□□□ 0.48
RNF43-202ENST00000577625 FBLN1P23142 703 aa18.04■□□□□ 0.48
RNF43-202ENST00000577625 OVOS2Q6IE36 1432 aa18.04■□□□□ 0.48
RNF43-202ENST00000577625 RUNDC1Q96C34 613 aa18.04■□□□□ 0.48
RNF43-202ENST00000577625 COG3Q96JB2 828 aa18.04■□□□□ 0.48
RNF43-202ENST00000577625 ANP32AP39687 249 aaKnown RBP18.03■□□□□ 0.48
RNF43-202ENST00000577625 RCAN3Q9UKA8 241 aa18.03■□□□□ 0.48
RNF43-202ENST00000577625 CDK12Q9NYV4 1490 aaPredicted RBP18.03■□□□□ 0.48
RNF43-202ENST00000577625 PMFBP1Q8TBY8 1022 aa18.03■□□□□ 0.48
RNF43-202ENST00000577625 U2AF1L5P0DN76 240 aaPredicted RBP18.02■□□□□ 0.48
RNF43-202ENST00000577625 U2AF1Q01081 240 aaKnown RBP eCLIP18.02■□□□□ 0.484e-11■□□□□ 10.3
RNF43-202ENST00000577625 GOLGA2Q08379 1002 aa18.02■□□□□ 0.48
RNF43-202ENST00000577625 PIK3C2AO00443 1686 aa18.01■□□□□ 0.47
RNF43-202ENST00000577625 ZBTB47Q9UFB7 747 aaPredicted RBP18.01■□□□□ 0.47
RNF43-202ENST00000577625 DIAPH1O60610 1272 aaKnown RBP18■□□□□ 0.47
RNF43-202ENST00000577625 RBM33Q96EV2 1170 aaKnown RBP18■□□□□ 0.47
RNF43-202ENST00000577625 EMILIN1Q9Y6C2 1016 aa18■□□□□ 0.47
RNF43-202ENST00000577625 DUSP27Q5VZP5 1158 aa17.99■□□□□ 0.47
RNF43-202ENST00000577625 TCP11L2Q8N4U5 519 aa17.99■□□□□ 0.47
RNF43-202ENST00000577625 TTC21AQ8NDW8 1320 aa17.99■□□□□ 0.47
RNF43-202ENST00000577625 MARF1Q9Y4F3 1742 aaKnown RBP17.99■□□□□ 0.47
RNF43-202ENST00000577625 U2SURPO15042 1029 aaKnown RBP17.98■□□□□ 0.47
RNF43-202ENST00000577625 NGDNQ8NEJ9 315 aaKnown RBP17.98■□□□□ 0.47
RNF43-202ENST00000577625 USP54Q70EL1 1684 aa17.98■□□□□ 0.47
RNF43-202ENST00000577625 STRCP1A6NGW2 1772 aa17.98■□□□□ 0.47
RNF43-202ENST00000577625 RRP1P56182 461 aaKnown RBP17.98■□□□□ 0.47
RNF43-202ENST00000577625 SLFN5Q08AF3 891 aa17.98■□□□□ 0.47
RNF43-202ENST00000577625 LRRC7Q96NW7 1537 aa17.98■□□□□ 0.47
RNF43-202ENST00000577625 PPM1GO15355 546 aaPredicted RBP17.97■□□□□ 0.47
RNF43-202ENST00000577625 B4GALNT3Q6L9W6 998 aa17.97■□□□□ 0.47
RNF43-202ENST00000577625 TRMT2AQ8IZ69 625 aaKnown RBP17.97■□□□□ 0.47
RNF43-202ENST00000577625 PHF23Q9BUL5 403 aaPredicted RBP17.97■□□□□ 0.47
RNF43-202ENST00000577625 USP35Q9P2H5 1018 aa17.97■□□□□ 0.47
RNF43-202ENST00000577625 PEAK1Q9H792 1746 aa17.96■□□□□ 0.47
RNF43-202ENST00000577625 NCBP3Q53F19 620 aaKnown RBP17.96■□□□□ 0.47
RNF43-202ENST00000577625 WWC1Q8IX03 1113 aa17.96■□□□□ 0.47
RNF43-202ENST00000577625 PLEKHF1Q96S99 279 aa17.96■□□□□ 0.47
RNF43-202ENST00000577625 SPINK5Q9NQ38 1064 aaPredicted RBP17.96■□□□□ 0.47
RNF43-202ENST00000577625 DMRT2Q9Y5R5 561 aa17.96■□□□□ 0.47
RNF43-202ENST00000577625 USP31Q70CQ4 1352 aa17.96■□□□□ 0.47
RNF43-202ENST00000577625 RRS1Q15050 365 aaKnown RBP17.96■□□□□ 0.46
RNF43-202ENST00000577625 RRP7AQ9Y3A4 280 aaKnown RBP17.96■□□□□ 0.46
RNF43-202ENST00000577625 KDM4FA0A1W2PPD8 638 aa17.95■□□□□ 0.46
RNF43-202ENST00000577625 E9PSI1 815 aa17.94■□□□□ 0.46
RNF43-202ENST00000577625 NEUROD2Q15784 382 aa17.93■□□□□ 0.46
RNF43-202ENST00000577625 CCDC27Q2M243 656 aa17.93■□□□□ 0.46
RNF43-202ENST00000577625 LMTK3Q96Q04 1460 aa17.92■□□□□ 0.46
RNF43-202ENST00000577625 IL13P35225 146 aa17.92■□□□□ 0.46
RNF43-202ENST00000577625 HSPA2P54652 639 aa17.91■□□□□ 0.46
RNF43-202ENST00000577625 PHF8Q9UPP1 1060 aa17.91■□□□□ 0.46
RNF43-202ENST00000577625 STRCQ7RTU9 1775 aa17.91■□□□□ 0.46
RNF43-202ENST00000577625 C14orf37Q86TY3 774 aa17.9■□□□□ 0.46
RNF43-202ENST00000577625 FCHSD2O94868 740 aa17.9■□□□□ 0.46
RNF43-202ENST00000577625 PROSER2Q86WR7 435 aaPredicted RBP17.9■□□□□ 0.46
RNF43-202ENST00000577625 RSPH6AQ9H0K4 717 aa17.9■□□□□ 0.46
RNF43-202ENST00000577625 MAPK8IP3Q9UPT6 1336 aa17.89■□□□□ 0.45
RNF43-202ENST00000577625 RGPD1P0DJD0 1748 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms