RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 TMC1Q8TDI8 760 aa17.75■□□□□ 0.43
CDK5RAP3-203ENST00000577442 ZNF692Q9BU19 519 aaPredicted RBP17.75■□□□□ 0.43
CDK5RAP3-203ENST00000577442 CPSF1Q10570 1443 aaKnown RBP17.73■□□□□ 0.43
CDK5RAP3-203ENST00000577442 MON2Q7Z3U7 1717 aa17.73■□□□□ 0.43
CDK5RAP3-203ENST00000577442 ABCA3Q99758 1704 aa17.73■□□□□ 0.43
CDK5RAP3-203ENST00000577442 HAP1P54257 671 aaPredicted RBP17.73■□□□□ 0.43
CDK5RAP3-203ENST00000577442 HDGFL2Q7Z4V5 671 aaPredicted RBP17.73■□□□□ 0.43
CDK5RAP3-203ENST00000577442 TERF2IPQ9NYB0 399 aa17.73■□□□□ 0.43
CDK5RAP3-203ENST00000577442 KTN1Q86UP2 1357 aaKnown RBP17.72■□□□□ 0.43
CDK5RAP3-203ENST00000577442 MARF1Q9Y4F3 1742 aaKnown RBP17.72■□□□□ 0.43
CDK5RAP3-203ENST00000577442 NRKQ7Z2Y5 1582 aa17.7■□□□□ 0.42
CDK5RAP3-203ENST00000577442 ADAMTS2O95450 1211 aa17.7■□□□□ 0.42
CDK5RAP3-203ENST00000577442 SSH2Q76I76 1423 aa17.7■□□□□ 0.42
CDK5RAP3-203ENST00000577442 TTC21AQ8NDW8 1320 aa17.7■□□□□ 0.42
CDK5RAP3-203ENST00000577442 CD163L1Q9NR16 1453 aa17.69■□□□□ 0.42
CDK5RAP3-203ENST00000577442 ABTB2Q8N961 1025 aa17.69■□□□□ 0.42
CDK5RAP3-203ENST00000577442 SLC12A5Q9H2X9 1139 aa17.69■□□□□ 0.42
CDK5RAP3-203ENST00000577442 CRYBG1Q9Y4K1 1723 aa17.69■□□□□ 0.42
CDK5RAP3-203ENST00000577442 A0A1W2PP64 1363 aa17.68■□□□□ 0.42
CDK5RAP3-203ENST00000577442 EDC4Q6P2E9 1401 aaKnown RBP17.68■□□□□ 0.42
CDK5RAP3-203ENST00000577442 TTC21BQ7Z4L5 1316 aa17.68■□□□□ 0.42
CDK5RAP3-203ENST00000577442 ANKRD36BQ8N2N9 1353 aa17.67■□□□□ 0.42
CDK5RAP3-203ENST00000577442 NLRP13Q86W25 1043 aa17.67■□□□□ 0.42
CDK5RAP3-203ENST00000577442 C8orf37Q96NL8 207 aa17.67■□□□□ 0.42
CDK5RAP3-203ENST00000577442 PHRF1Q9P1Y6 1649 aaKnown RBP17.67■□□□□ 0.42
CDK5RAP3-203ENST00000577442 ZNF772Q68DY9 489 aaPredicted RBP17.66■□□□□ 0.42
CDK5RAP3-203ENST00000577442 CABLES1Q8TDN4 633 aa17.66■□□□□ 0.42
CDK5RAP3-203ENST00000577442 PIK3C2AO00443 1686 aa17.66■□□□□ 0.42
CDK5RAP3-203ENST00000577442 MYOM1P52179 1685 aa17.66■□□□□ 0.42
CDK5RAP3-203ENST00000577442 PLEKHG5O94827 1062 aa17.65■□□□□ 0.42
CDK5RAP3-203ENST00000577442 NGLY1Q96IV0 654 aa17.65■□□□□ 0.42
CDK5RAP3-203ENST00000577442 USP19O94966 1318 aa17.65■□□□□ 0.42
CDK5RAP3-203ENST00000577442 AFF2P51816 1311 aa17.65■□□□□ 0.42
CDK5RAP3-203ENST00000577442 NUTM2GQ5VZR2 741 aa17.64■□□□□ 0.41
CDK5RAP3-203ENST00000577442 NLRP6P59044 892 aa17.63■□□□□ 0.41
CDK5RAP3-203ENST00000577442 POLR3GLQ9BT43 218 aa17.63■□□□□ 0.41
CDK5RAP3-203ENST00000577442 ZEB1P37275 1124 aaPredicted RBP17.62■□□□□ 0.41
CDK5RAP3-203ENST00000577442 USP54Q70EL1 1684 aa17.61■□□□□ 0.41
CDK5RAP3-203ENST00000577442 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.61■□□□□ 0.41
CDK5RAP3-203ENST00000577442 FNBP4Q8N3X1 1017 aaPredicted RBP17.61■□□□□ 0.41
CDK5RAP3-203ENST00000577442 RGS17Q9UGC6 210 aaPredicted RBP17.61■□□□□ 0.41
CDK5RAP3-203ENST00000577442 SLIT3O75094 1523 aa17.61■□□□□ 0.41
CDK5RAP3-203ENST00000577442 NWD2Q9ULI1 1742 aa17.61■□□□□ 0.41
CDK5RAP3-203ENST00000577442 COL14A1Q05707 1796 aaKnown RBP17.61■□□□□ 0.41
CDK5RAP3-203ENST00000577442 USP31Q70CQ4 1352 aa17.6■□□□□ 0.41
CDK5RAP3-203ENST00000577442 PLCH1Q4KWH8 1693 aa17.6■□□□□ 0.41
CDK5RAP3-203ENST00000577442 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.6■□□□□ 0.41
CDK5RAP3-203ENST00000577442 SLIT2O94813 1529 aa17.59■□□□□ 0.41
CDK5RAP3-203ENST00000577442 PRDM11Q9NQV5 511 aa17.59■□□□□ 0.41
CDK5RAP3-203ENST00000577442 USP21Q9UK80 565 aa17.59■□□□□ 0.41
CDK5RAP3-203ENST00000577442 CPDO75976 1380 aa17.58■□□□□ 0.4
CDK5RAP3-203ENST00000577442 KIAA0232Q92628 1395 aa17.57■□□□□ 0.4
CDK5RAP3-203ENST00000577442 GCP02774 474 aa17.57■□□□□ 0.4
CDK5RAP3-203ENST00000577442 NME9Q86XW9 330 aa17.57■□□□□ 0.4
CDK5RAP3-203ENST00000577442 KCNH5Q8NCM2 988 aa17.57■□□□□ 0.4
CDK5RAP3-203ENST00000577442 POTEAQ6S8J7 498 aa17.56■□□□□ 0.4
CDK5RAP3-203ENST00000577442 KIF20BQ96Q89 1820 aa17.56■□□□□ 0.4
CDK5RAP3-203ENST00000577442 OVOS2A0A0J9YW53 1432 aa17.55■□□□□ 0.4
CDK5RAP3-203ENST00000577442 OVOS2Q6IE36 1432 aa17.55■□□□□ 0.4
CDK5RAP3-203ENST00000577442 NSD3Q9BZ95 1437 aa17.55■□□□□ 0.4
CDK5RAP3-203ENST00000577442 KIF7Q2M1P5 1343 aa17.55■□□□□ 0.4
CDK5RAP3-203ENST00000577442 UNC5CLQ8IV45 518 aa17.55■□□□□ 0.4
CDK5RAP3-203ENST00000577442 TRPC5Q9UL62 973 aaPredicted RBP17.55■□□□□ 0.4
CDK5RAP3-203ENST00000577442 BCL9LQ86UU0 1499 aa17.55■□□□□ 0.4
CDK5RAP3-203ENST00000577442 FAM83GA6ND36 823 aa17.54■□□□□ 0.4
CDK5RAP3-203ENST00000577442 ZC3H6P61129 1189 aaKnown RBP17.54■□□□□ 0.4
CDK5RAP3-203ENST00000577442 ATRNO75882 1429 aa17.54■□□□□ 0.4
CDK5RAP3-203ENST00000577442 NFAT5O94916 1531 aa17.53■□□□□ 0.4
CDK5RAP3-203ENST00000577442 NRAPQ86VF7 1730 aa17.53■□□□□ 0.4
CDK5RAP3-203ENST00000577442 C11orf95C9JLR9 678 aaPredicted RBP17.53■□□□□ 0.4
CDK5RAP3-203ENST00000577442 COG3Q96JB2 828 aa17.53■□□□□ 0.4
CDK5RAP3-203ENST00000577442 QTRT2Q9H974 415 aaKnown RBP17.53■□□□□ 0.4
CDK5RAP3-203ENST00000577442 CCDC7Q96M83 1385 aa17.53■□□□□ 0.4
CDK5RAP3-203ENST00000577442 BTG4Q9NY30 223 aa17.52■□□□□ 0.4
CDK5RAP3-203ENST00000577442 ABCC6O95255 1503 aa17.52■□□□□ 0.39
CDK5RAP3-203ENST00000577442 CGNL1Q0VF96 1302 aa17.51■□□□□ 0.39
CDK5RAP3-203ENST00000577442 RXRBP28702 533 aa17.51■□□□□ 0.39
CDK5RAP3-203ENST00000577442 RBM6P78332 1123 aaKnown RBP17.51■□□□□ 0.39
CDK5RAP3-203ENST00000577442 ZRANB1Q9UGI0 708 aa17.51■□□□□ 0.39
CDK5RAP3-203ENST00000577442 CDK12Q9NYV4 1490 aaPredicted RBP17.5■□□□□ 0.39
CDK5RAP3-203ENST00000577442 CHRNA2Q15822 529 aa17.5■□□□□ 0.39
CDK5RAP3-203ENST00000577442 LMO7Q8WWI1 1683 aa17.5■□□□□ 0.39
CDK5RAP3-203ENST00000577442 AATKQ6ZMQ8 1374 aa17.5■□□□□ 0.39
CDK5RAP3-203ENST00000577442 ZBTB7CA1YPR0 619 aa17.49■□□□□ 0.39
CDK5RAP3-203ENST00000577442 SOX12O15370 315 aa17.49■□□□□ 0.39
CDK5RAP3-203ENST00000577442 VPS72Q15906 364 aa17.49■□□□□ 0.39
CDK5RAP3-203ENST00000577442 CARD14Q9BXL6 1004 aa17.49■□□□□ 0.39
CDK5RAP3-203ENST00000577442 PANK3Q9H999 370 aa17.49■□□□□ 0.39
CDK5RAP3-203ENST00000577442 FYB1O15117 783 aa17.48■□□□□ 0.39
CDK5RAP3-203ENST00000577442 ILDR2Q71H61 639 aa17.48■□□□□ 0.39
CDK5RAP3-203ENST00000577442 ARHGEF25Q86VW2 580 aa17.48■□□□□ 0.39
CDK5RAP3-203ENST00000577442 LTN1O94822 1766 aa17.48■□□□□ 0.39
CDK5RAP3-203ENST00000577442 WASHC2AQ641Q2 1341 aa17.47■□□□□ 0.39
CDK5RAP3-203ENST00000577442 GGNBP2Q9H3C7 697 aa17.47■□□□□ 0.39
CDK5RAP3-203ENST00000577442 COL18A1P39060 1754 aa17.46■□□□□ 0.39
CDK5RAP3-203ENST00000577442 CAMTA1Q9Y6Y1 1673 aa17.46■□□□□ 0.39
CDK5RAP3-203ENST00000577442 NSD2O96028 1365 aa17.46■□□□□ 0.39
CDK5RAP3-203ENST00000577442 GJD4Q96KN9 370 aaPredicted RBP17.46■□□□□ 0.39
CDK5RAP3-203ENST00000577442 CCDC9Q9Y3X0 531 aaKnown RBP17.46■□□□□ 0.39
CDK5RAP3-203ENST00000577442 ANKRD26Q9UPS8 1709 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms