RNA–Protein interactions for RNA: ENST00000577396.5

SUPT4H1-202, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-202ENST00000577396 ALS2Q96Q42 1657 aa27.83■■■□□ 2.04
SUPT4H1-202ENST00000577396 LMOD2Q6P5Q4 547 aa27.82■■■□□ 2.04
SUPT4H1-202ENST00000577396 HDGFL2Q7Z4V5 671 aaPredicted RBP27.82■■■□□ 2.04
SUPT4H1-202ENST00000577396 A0A1W2PP64 1363 aa27.82■■■□□ 2.04
SUPT4H1-202ENST00000577396 COL22A1Q8NFW1 1626 aaPredicted RBP27.82■■■□□ 2.04
SUPT4H1-202ENST00000577396 TTC21BQ7Z4L5 1316 aa27.8■■■□□ 2.04
SUPT4H1-202ENST00000577396 ANKRD36BQ8N2N9 1353 aa27.79■■■□□ 2.04
SUPT4H1-202ENST00000577396 KIF7Q2M1P5 1343 aa27.79■■■□□ 2.04
SUPT4H1-202ENST00000577396 ABTB2Q8N961 1025 aa27.78■■■□□ 2.04
SUPT4H1-202ENST00000577396 POLR3GLQ9BT43 218 aa27.78■■■□□ 2.04
SUPT4H1-202ENST00000577396 LRP6O75581 1613 aa27.78■■■□□ 2.04
SUPT4H1-202ENST00000577396 NUTM2BA6NNL0 878 aaPredicted RBP27.78■■■□□ 2.04
SUPT4H1-202ENST00000577396 NUTM2EB1AL46 878 aaPredicted RBP27.78■■■□□ 2.04
SUPT4H1-202ENST00000577396 NUTM2AQ8IVF1 878 aaPredicted RBP27.78■■■□□ 2.04
SUPT4H1-202ENST00000577396 CABLES1Q8TDN4 633 aa27.77■■■□□ 2.04
SUPT4H1-202ENST00000577396 MON2Q7Z3U7 1717 aa27.77■■■□□ 2.04
SUPT4H1-202ENST00000577396 MYOM1P52179 1685 aa27.77■■■□□ 2.04
SUPT4H1-202ENST00000577396 TTC21AQ8NDW8 1320 aa27.75■■■□□ 2.03
SUPT4H1-202ENST00000577396 NUTM2GQ5VZR2 741 aa27.74■■■□□ 2.03
SUPT4H1-202ENST00000577396 EDC4Q6P2E9 1401 aaKnown RBP27.74■■■□□ 2.03
SUPT4H1-202ENST00000577396 WASHC2AQ641Q2 1341 aa27.74■■■□□ 2.03
SUPT4H1-202ENST00000577396 NRKQ7Z2Y5 1582 aa27.74■■■□□ 2.03
SUPT4H1-202ENST00000577396 CARD14Q9BXL6 1004 aa27.74■■■□□ 2.03
SUPT4H1-202ENST00000577396 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.72■■■□□ 2.03
SUPT4H1-202ENST00000577396 MED1Q15648 1581 aaPredicted RBP27.72■■■□□ 2.03
SUPT4H1-202ENST00000577396 NLRP13Q86W25 1043 aa27.71■■■□□ 2.03
SUPT4H1-202ENST00000577396 CCDC7Q96M83 1385 aa27.71■■■□□ 2.03
SUPT4H1-202ENST00000577396 NLRP6P59044 892 aa27.7■■■□□ 2.03
SUPT4H1-202ENST00000577396 PLEKHG5O94827 1062 aa27.7■■■□□ 2.02
SUPT4H1-202ENST00000577396 ADAMTS2O95450 1211 aa27.69■■■□□ 2.02
SUPT4H1-202ENST00000577396 USP19O94966 1318 aa27.69■■■□□ 2.02
SUPT4H1-202ENST00000577396 PIK3C2AO00443 1686 aa27.68■■■□□ 2.02
SUPT4H1-202ENST00000577396 NME9Q86XW9 330 aa27.68■■■□□ 2.02
SUPT4H1-202ENST00000577396 PANK3Q9H999 370 aa27.67■■■□□ 2.02
SUPT4H1-202ENST00000577396 ZRANB1Q9UGI0 708 aa27.67■■■□□ 2.02
SUPT4H1-202ENST00000577396 USP31Q70CQ4 1352 aa27.66■■■□□ 2.02
SUPT4H1-202ENST00000577396 CRYBG1Q9Y4K1 1723 aa27.66■■■□□ 2.02
SUPT4H1-202ENST00000577396 MEX3CQ5U5Q3 659 aaKnown RBP27.64■■■□□ 2.02
SUPT4H1-202ENST00000577396 FYB1O15117 783 aa27.63■■■□□ 2.01
SUPT4H1-202ENST00000577396 GCP02774 474 aa27.63■■■□□ 2.01
SUPT4H1-202ENST00000577396 HAP1P54257 671 aaPredicted RBP27.63■■■□□ 2.01
SUPT4H1-202ENST00000577396 ABCA3Q99758 1704 aa27.63■■■□□ 2.01
SUPT4H1-202ENST00000577396 C8orf37Q96NL8 207 aa27.61■■■□□ 2.01
SUPT4H1-202ENST00000577396 NSD3Q9BZ95 1437 aa27.61■■■□□ 2.01
SUPT4H1-202ENST00000577396 RGS17Q9UGC6 210 aaPredicted RBP27.61■■■□□ 2.01
SUPT4H1-202ENST00000577396 MARF1Q9Y4F3 1742 aaKnown RBP27.6■■■□□ 2.01
SUPT4H1-202ENST00000577396 FAM83GA6ND36 823 aa27.59■■■□□ 2.01
SUPT4H1-202ENST00000577396 SLIT3O75094 1523 aa27.59■■■□□ 2.01
SUPT4H1-202ENST00000577396 NGLY1Q96IV0 654 aa27.59■■■□□ 2.01
SUPT4H1-202ENST00000577396 PHRF1Q9P1Y6 1649 aaKnown RBP27.59■■■□□ 2.01
SUPT4H1-202ENST00000577396 FNBP4Q8N3X1 1017 aaPredicted RBP27.58■■■□□ 2.01
SUPT4H1-202ENST00000577396 ZC3H6P61129 1189 aaKnown RBP27.57■■■□□ 2
SUPT4H1-202ENST00000577396 OVOS2A0A0J9YW53 1432 aa27.57■■■□□ 2
SUPT4H1-202ENST00000577396 OVOS2Q6IE36 1432 aa27.57■■■□□ 2
SUPT4H1-202ENST00000577396 USP54Q70EL1 1684 aa27.56■■■□□ 2
SUPT4H1-202ENST00000577396 PER1O15534 1290 aaPredicted RBP27.56■■■□□ 2
SUPT4H1-202ENST00000577396 KCNH5Q8NCM2 988 aa27.56■■■□□ 2
SUPT4H1-202ENST00000577396 GGNBP2Q9H3C7 697 aa27.56■■■□□ 2
SUPT4H1-202ENST00000577396 CPDO75976 1380 aa27.55■■■□□ 2
SUPT4H1-202ENST00000577396 KIAA0232Q92628 1395 aa27.55■■■□□ 2
SUPT4H1-202ENST00000577396 AFF2P51816 1311 aa27.54■■■□□ 2
SUPT4H1-202ENST00000577396 PHF23Q9BUL5 403 aaPredicted RBP27.54■■■□□ 2
SUPT4H1-202ENST00000577396 CGNL1Q0VF96 1302 aa27.54■■■□□ 2
SUPT4H1-202ENST00000577396 COG3Q96JB2 828 aa27.53■■■□□ 2
SUPT4H1-202ENST00000577396 SLIT2O94813 1529 aa27.51■■□□□ 1.99
SUPT4H1-202ENST00000577396 PRDM11Q9NQV5 511 aa27.51■■□□□ 1.99
SUPT4H1-202ENST00000577396 ARHGEF25Q86VW2 580 aa27.5■■□□□ 1.99
SUPT4H1-202ENST00000577396 BCL9LQ86UU0 1499 aa27.5■■□□□ 1.99
SUPT4H1-202ENST00000577396 SOX12O15370 315 aa27.49■■□□□ 1.99
SUPT4H1-202ENST00000577396 CHRNA2Q15822 529 aa27.49■■□□□ 1.99
SUPT4H1-202ENST00000577396 NFAT5O94916 1531 aa27.49■■□□□ 1.99
SUPT4H1-202ENST00000577396 ZNF772Q68DY9 489 aaPredicted RBP27.49■■□□□ 1.99
SUPT4H1-202ENST00000577396 USP21Q9UK80 565 aa27.49■■□□□ 1.99
SUPT4H1-202ENST00000577396 KNSTRNQ9Y448 316 aa27.49■■□□□ 1.99
SUPT4H1-202ENST00000577396 AMER1Q5JTC6 1135 aaPredicted RBP27.48■■□□□ 1.99
SUPT4H1-202ENST00000577396 FBLN1P23142 703 aa27.46■■□□□ 1.99
SUPT4H1-202ENST00000577396 POTEAQ6S8J7 498 aa27.46■■□□□ 1.99
SUPT4H1-202ENST00000577396 KIF20BQ96Q89 1820 aa27.46■■□□□ 1.99
SUPT4H1-202ENST00000577396 BTG4Q9NY30 223 aa27.45■■□□□ 1.99
SUPT4H1-202ENST00000577396 COL14A1Q05707 1796 aaKnown RBP27.45■■□□□ 1.98
SUPT4H1-202ENST00000577396 UNC5CLQ8IV45 518 aa27.45■■□□□ 1.98
SUPT4H1-202ENST00000577396 AATKQ6ZMQ8 1374 aa27.44■■□□□ 1.98
SUPT4H1-202ENST00000577396 QTRT2Q9H974 415 aaKnown RBP27.42■■□□□ 1.98
SUPT4H1-202ENST00000577396 AXIN2Q9Y2T1 843 aa27.41■■□□□ 1.98
SUPT4H1-202ENST00000577396 NSD2O96028 1365 aa27.41■■□□□ 1.98
SUPT4H1-202ENST00000577396 PLCH1Q4KWH8 1693 aa27.41■■□□□ 1.98
SUPT4H1-202ENST00000577396 CAMTA1Q9Y6Y1 1673 aa27.41■■□□□ 1.98
SUPT4H1-202ENST00000577396 NWD2Q9ULI1 1742 aa27.4■■□□□ 1.98
SUPT4H1-202ENST00000577396 COL18A1P39060 1754 aa27.4■■□□□ 1.98
SUPT4H1-202ENST00000577396 LMO7Q8WWI1 1683 aa27.4■■□□□ 1.98
SUPT4H1-202ENST00000577396 ZBTB7CA1YPR0 619 aa27.39■■□□□ 1.98
SUPT4H1-202ENST00000577396 TRPC5Q9UL62 973 aaPredicted RBP27.39■■□□□ 1.98
SUPT4H1-202ENST00000577396 ATRNO75882 1429 aa27.38■■□□□ 1.97
SUPT4H1-202ENST00000577396 MAP3K19Q56UN5 1328 aa27.38■■□□□ 1.97
SUPT4H1-202ENST00000577396 ZNF316A6NFI3 1004 aaPredicted RBP27.38■■□□□ 1.97
SUPT4H1-202ENST00000577396 NPC1L1Q9UHC9 1359 aa27.36■■□□□ 1.97
SUPT4H1-202ENST00000577396 DDX10Q13206 875 aaKnown RBP27.36■■□□□ 1.97
SUPT4H1-202ENST00000577396 VPS72Q15906 364 aa27.36■■□□□ 1.97
SUPT4H1-202ENST00000577396 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.36■■□□□ 1.97
SUPT4H1-202ENST00000577396 RRS1Q15050 365 aaKnown RBP27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms