RNA–Protein interactions for RNA: ENST00000577241.1

MSI2-205, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-205ENST00000577241 ZNF692Q9BU19 519 aaPredicted RBP22.15■■□□□ 1.14
MSI2-205ENST00000577241 ST20-MTHFSA0A0A6YYL1 179 aa22.14■■□□□ 1.13
MSI2-205ENST00000577241 RXRBP28702 533 aa22.14■■□□□ 1.13
MSI2-205ENST00000577241 USP21Q9UK80 565 aa22.14■■□□□ 1.13
MSI2-205ENST00000577241 CABLES1Q8TDN4 633 aa22.13■■□□□ 1.13
MSI2-205ENST00000577241 QTRT2Q9H974 415 aaKnown RBP22.13■■□□□ 1.13
MSI2-205ENST00000577241 ALS2Q96Q42 1657 aa22.12■■□□□ 1.13
MSI2-205ENST00000577241 USP47Q96K76 1375 aa22.12■■□□□ 1.13
MSI2-205ENST00000577241 TRPC5Q9UL62 973 aaPredicted RBP22.11■■□□□ 1.13
MSI2-205ENST00000577241 ABTB2Q8N961 1025 aa22.1■■□□□ 1.13
MSI2-205ENST00000577241 TESK2Q96S53 571 aa22.1■■□□□ 1.13
MSI2-205ENST00000577241 USP6P35125 1406 aa22.09■■□□□ 1.13
MSI2-205ENST00000577241 RBM6P78332 1123 aaKnown RBP22.09■■□□□ 1.13
MSI2-205ENST00000577241 PLEKHG5O94827 1062 aa22.08■■□□□ 1.13
MSI2-205ENST00000577241 NLRP13Q86W25 1043 aa22.08■■□□□ 1.13
MSI2-205ENST00000577241 TMF1P82094 1093 aa22.07■■□□□ 1.12
MSI2-205ENST00000577241 MARF1Q9Y4F3 1742 aaKnown RBP22.06■■□□□ 1.12
MSI2-205ENST00000577241 UNC5CLQ8IV45 518 aa22.06■■□□□ 1.12
MSI2-205ENST00000577241 CDK12Q9NYV4 1490 aaPredicted RBP22.06■■□□□ 1.12
MSI2-205ENST00000577241 SLIT2O94813 1529 aa22.06■■□□□ 1.12
MSI2-205ENST00000577241 BCL9LQ86UU0 1499 aa22.05■■□□□ 1.12
MSI2-205ENST00000577241 NINLQ9Y2I6 1382 aa22.05■■□□□ 1.12
MSI2-205ENST00000577241 CDCA8Q53HL2 280 aa22.05■■□□□ 1.12
MSI2-205ENST00000577241 TMC1Q8TDI8 760 aa22.04■■□□□ 1.12
MSI2-205ENST00000577241 CPSF1Q10570 1443 aaKnown RBP22.04■■□□□ 1.12
MSI2-205ENST00000577241 HDGFL2Q7Z4V5 671 aaPredicted RBP22.03■■□□□ 1.12
MSI2-205ENST00000577241 TERF2IPQ9NYB0 399 aa22.03■■□□□ 1.12
MSI2-205ENST00000577241 ATRNO75882 1429 aa22.03■■□□□ 1.12
MSI2-205ENST00000577241 SSH2Q76I76 1423 aa22.03■■□□□ 1.12
MSI2-205ENST00000577241 TTC21AQ8NDW8 1320 aa22.03■■□□□ 1.12
MSI2-205ENST00000577241 KTN1Q86UP2 1357 aaKnown RBP22.02■■□□□ 1.12
MSI2-205ENST00000577241 FAM83GA6ND36 823 aa22.02■■□□□ 1.12
MSI2-205ENST00000577241 NUTM2GQ5VZR2 741 aa22.02■■□□□ 1.12
MSI2-205ENST00000577241 ABCA3Q99758 1704 aa22.02■■□□□ 1.12
MSI2-205ENST00000577241 NLRP6P59044 892 aa22.01■■□□□ 1.11
MSI2-205ENST00000577241 PRDM11Q9NQV5 511 aa22.01■■□□□ 1.11
MSI2-205ENST00000577241 USP19O94966 1318 aa22.01■■□□□ 1.11
MSI2-205ENST00000577241 TTC21BQ7Z4L5 1316 aa22.01■■□□□ 1.11
MSI2-205ENST00000577241 GJD4Q96KN9 370 aaPredicted RBP21.99■■□□□ 1.11
MSI2-205ENST00000577241 SLC12A5Q9H2X9 1139 aa21.99■■□□□ 1.11
MSI2-205ENST00000577241 GCP02774 474 aa21.98■■□□□ 1.11
MSI2-205ENST00000577241 EIF4G2P78344 907 aaKnown RBP eCLIP21.97■■□□□ 1.11
MSI2-205ENST00000577241 VPS72Q15906 364 aa21.97■■□□□ 1.11
MSI2-205ENST00000577241 BTG4Q9NY30 223 aa21.97■■□□□ 1.11
MSI2-205ENST00000577241 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.97■■□□□ 1.11
MSI2-205ENST00000577241 NWD2Q9ULI1 1742 aa21.96■■□□□ 1.11
MSI2-205ENST00000577241 CRYBG1Q9Y4K1 1723 aa21.96■■□□□ 1.11
MSI2-205ENST00000577241 CPDO75976 1380 aa21.96■■□□□ 1.11
MSI2-205ENST00000577241 KIAA0232Q92628 1395 aa21.96■■□□□ 1.11
MSI2-205ENST00000577241 COL14A1Q05707 1796 aaKnown RBP21.95■■□□□ 1.1
MSI2-205ENST00000577241 ZC3H6P61129 1189 aaKnown RBP21.95■■□□□ 1.1
MSI2-205ENST00000577241 AKAP12Q02952 1782 aa21.94■■□□□ 1.1
MSI2-205ENST00000577241 KCNH5Q8NCM2 988 aa21.94■■□□□ 1.1
MSI2-205ENST00000577241 EDC4Q6P2E9 1401 aaKnown RBP21.94■■□□□ 1.1
MSI2-205ENST00000577241 CD163L1Q9NR16 1453 aa21.94■■□□□ 1.1
MSI2-205ENST00000577241 PHRF1Q9P1Y6 1649 aaKnown RBP21.94■■□□□ 1.1
MSI2-205ENST00000577241 CCDC9Q9Y3X0 531 aaKnown RBP21.93■■□□□ 1.1
MSI2-205ENST00000577241 RGS12O14924 1447 aa21.92■■□□□ 1.1
MSI2-205ENST00000577241 A0A1W2PP64 1363 aa21.92■■□□□ 1.1
MSI2-205ENST00000577241 PLCH1Q4KWH8 1693 aa21.91■■□□□ 1.1
MSI2-205ENST00000577241 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.91■■□□□ 1.1
MSI2-205ENST00000577241 NRKQ7Z2Y5 1582 aa21.91■■□□□ 1.1
MSI2-205ENST00000577241 MON2Q7Z3U7 1717 aa21.9■■□□□ 1.1
MSI2-205ENST00000577241 CHRNA2Q15822 529 aa21.9■■□□□ 1.1
MSI2-205ENST00000577241 SLIT3O75094 1523 aa21.9■■□□□ 1.1
MSI2-205ENST00000577241 USP31Q70CQ4 1352 aa21.89■■□□□ 1.1
MSI2-205ENST00000577241 ANKRD36BQ8N2N9 1353 aa21.89■■□□□ 1.1
MSI2-205ENST00000577241 PIK3C2AO00443 1686 aa21.88■■□□□ 1.09
MSI2-205ENST00000577241 HSPA5P11021 654 aaKnown RBP21.87■■□□□ 1.09
MSI2-205ENST00000577241 EVA1CP58658 441 aa21.87■■□□□ 1.09
MSI2-205ENST00000577241 ONECUT3O60422 494 aaPredicted RBP21.86■■□□□ 1.09
MSI2-205ENST00000577241 AATKQ6ZMQ8 1374 aa21.86■■□□□ 1.09
MSI2-205ENST00000577241 NME9Q86XW9 330 aa21.85■■□□□ 1.09
MSI2-205ENST00000577241 SPATA31A5Q5VU36 1347 aa21.84■■□□□ 1.09
MSI2-205ENST00000577241 SPATA31A7Q8IWB4 1347 aa21.84■■□□□ 1.09
MSI2-205ENST00000577241 GLI3P10071 1580 aa21.84■■□□□ 1.09
MSI2-205ENST00000577241 STRN4Q9NRL3 753 aa21.84■■□□□ 1.09
MSI2-205ENST00000577241 NRAPQ86VF7 1730 aa21.83■■□□□ 1.09
MSI2-205ENST00000577241 ARHGEF25Q86VW2 580 aa21.83■■□□□ 1.09
MSI2-205ENST00000577241 ZBTB7CA1YPR0 619 aa21.81■■□□□ 1.08
MSI2-205ENST00000577241 SEPT12Q8IYM1 358 aa21.81■■□□□ 1.08
MSI2-205ENST00000577241 CAMTA1Q9Y6Y1 1673 aa21.8■■□□□ 1.08
MSI2-205ENST00000577241 COG3Q96JB2 828 aa21.8■■□□□ 1.08
MSI2-205ENST00000577241 SPATA31A1Q5TZJ5 1347 aa21.8■■□□□ 1.08
MSI2-205ENST00000577241 SOX12O15370 315 aa21.79■■□□□ 1.08
MSI2-205ENST00000577241 FAM98CQ17RN3 349 aaKnown RBP21.79■■□□□ 1.08
MSI2-205ENST00000577241 UPF1Q92900 1129 aaKnown RBP eCLIP21.79■■□□□ 1.08
MSI2-205ENST00000577241 ZRANB1Q9UGI0 708 aa21.79■■□□□ 1.08
MSI2-205ENST00000577241 OVOS2A0A0J9YW53 1432 aa21.79■■□□□ 1.08
MSI2-205ENST00000577241 OVOS2Q6IE36 1432 aa21.79■■□□□ 1.08
MSI2-205ENST00000577241 USP54Q70EL1 1684 aa21.79■■□□□ 1.08
MSI2-205ENST00000577241 LMO7Q8WWI1 1683 aa21.79■■□□□ 1.08
MSI2-205ENST00000577241 A0A0G2JS52 829 aa21.78■■□□□ 1.08
MSI2-205ENST00000577241 MYT1Q01538 1121 aa21.78■■□□□ 1.08
MSI2-205ENST00000577241 THRAP3Q9Y2W1 955 aaKnown RBP21.77■■□□□ 1.08
MSI2-205ENST00000577241 COL5A2P05997 1499 aaPredicted RBP21.77■■□□□ 1.07
MSI2-205ENST00000577241 NFAT5O94916 1531 aa21.76■■□□□ 1.07
MSI2-205ENST00000577241 LARP1Q6PKG0 1096 aaKnown RBP21.76■■□□□ 1.07
MSI2-205ENST00000577241 POLR3GLQ9BT43 218 aa21.76■■□□□ 1.07
MSI2-205ENST00000577241 ABCC6O95255 1503 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms