RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 RGPD8O14715 1765 aaPredicted RBP16.85■□□□□ 0.29
TSEN54-204ENST00000577197 USP6P35125 1406 aa16.85■□□□□ 0.29
TSEN54-204ENST00000577197 SSH2Q76I76 1423 aa16.85■□□□□ 0.29
TSEN54-204ENST00000577197 USP54Q70EL1 1684 aa16.84■□□□□ 0.29
TSEN54-204ENST00000577197 CC2D1BQ5T0F9 858 aaKnown RBP16.83■□□□□ 0.28
TSEN54-204ENST00000577197 TTC21AQ8NDW8 1320 aa16.83■□□□□ 0.28
TSEN54-204ENST00000577197 NGDNQ8NEJ9 315 aaKnown RBP16.83■□□□□ 0.28
TSEN54-204ENST00000577197 PMFBP1Q8TBY8 1022 aa16.83■□□□□ 0.28
TSEN54-204ENST00000577197 ROBO1Q9Y6N7 1651 aa16.82■□□□□ 0.28
TSEN54-204ENST00000577197 ACEP12821 1306 aa16.82■□□□□ 0.28
TSEN54-204ENST00000577197 NPHP3Q7Z494 1330 aa16.82■□□□□ 0.28
TSEN54-204ENST00000577197 PIP4K2BP78356 416 aa16.81■□□□□ 0.28
TSEN54-204ENST00000577197 MRS2Q9HD23 443 aa16.81■□□□□ 0.28
TSEN54-204ENST00000577197 FYB1O15117 783 aa16.8■□□□□ 0.28
TSEN54-204ENST00000577197 FOXO3O43524 673 aa16.8■□□□□ 0.28
TSEN54-204ENST00000577197 PPP2R1AP30153 589 aa16.8■□□□□ 0.28
TSEN54-204ENST00000577197 AHDC1Q5TGY3 1603 aaPredicted RBP16.79■□□□□ 0.28
TSEN54-204ENST00000577197 MORC1Q86VD1 984 aa16.79■□□□□ 0.28
TSEN54-204ENST00000577197 AATKQ6ZMQ8 1374 aa16.78■□□□□ 0.28
TSEN54-204ENST00000577197 NHSL1Q5SYE7 1610 aa16.78■□□□□ 0.28
TSEN54-204ENST00000577197 PSME1Q06323 249 aa16.78■□□□□ 0.28
TSEN54-204ENST00000577197 USP31Q70CQ4 1352 aa16.77■□□□□ 0.28
TSEN54-204ENST00000577197 SOS2Q07890 1332 aaPredicted RBP16.76■□□□□ 0.27
TSEN54-204ENST00000577197 TTC21BQ7Z4L5 1316 aa16.76■□□□□ 0.27
TSEN54-204ENST00000577197 KRT28Q7Z3Y7 464 aa16.76■□□□□ 0.27
TSEN54-204ENST00000577197 PNISRQ8TF01 805 aaKnown RBP16.76■□□□□ 0.27
TSEN54-204ENST00000577197 OVOS2A0A0J9YW53 1432 aa16.76■□□□□ 0.27
TSEN54-204ENST00000577197 OVOS2Q6IE36 1432 aa16.76■□□□□ 0.27
TSEN54-204ENST00000577197 SMG6Q86US8 1419 aaKnown RBP16.76■□□□□ 0.27
TSEN54-204ENST00000577197 PXDNQ92626 1479 aa16.75■□□□□ 0.27
TSEN54-204ENST00000577197 FBXO41Q8TF61 875 aa16.75■□□□□ 0.27
TSEN54-204ENST00000577197 SBNO1A3KN83 1393 aa16.75■□□□□ 0.27
TSEN54-204ENST00000577197 DDX17Q92841 729 aaKnown RBP16.73■□□□□ 0.27
TSEN54-204ENST00000577197 COG3Q96JB2 828 aa16.72■□□□□ 0.27
TSEN54-204ENST00000577197 TRPM3Q9HCF6 1732 aaPredicted RBP16.71■□□□□ 0.27
TSEN54-204ENST00000577197 XPCQ01831 940 aaPredicted RBP16.71■□□□□ 0.27
TSEN54-204ENST00000577197 CCDC184Q52MB2 194 aa16.71■□□□□ 0.27
TSEN54-204ENST00000577197 LRRC59Q96AG4 307 aaKnown RBP16.71■□□□□ 0.27
TSEN54-204ENST00000577197 PNPLA6Q8IY17 1366 aa16.71■□□□□ 0.27
TSEN54-204ENST00000577197 PIK3C2AO00443 1686 aa16.71■□□□□ 0.27
TSEN54-204ENST00000577197 PHLPP1O60346 1717 aa16.7■□□□□ 0.26
TSEN54-204ENST00000577197 KIF24Q5T7B8 1368 aa16.7■□□□□ 0.26
TSEN54-204ENST00000577197 CFAP53Q96M91 514 aa16.7■□□□□ 0.26
TSEN54-204ENST00000577197 GGNBP2Q9H3C7 697 aa16.7■□□□□ 0.26
TSEN54-204ENST00000577197 COL16A1Q07092 1604 aaPredicted RBP16.7■□□□□ 0.26
TSEN54-204ENST00000577197 TNS3Q68CZ2 1445 aa16.7■□□□□ 0.26
TSEN54-204ENST00000577197 SPATA31A3Q5VYP0 1347 aa16.7■□□□□ 0.26
TSEN54-204ENST00000577197 CDK12Q9NYV4 1490 aaPredicted RBP16.69■□□□□ 0.26
TSEN54-204ENST00000577197 ARHGEF10O15013 1369 aa16.69■□□□□ 0.26
TSEN54-204ENST00000577197 PAK3O75914 559 aaPredicted RBP16.69■□□□□ 0.26
TSEN54-204ENST00000577197 CENPBP07199 599 aaPredicted RBP16.68■□□□□ 0.26
TSEN54-204ENST00000577197 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.68■□□□□ 0.26
TSEN54-204ENST00000577197 BLMP54132 1417 aaPredicted RBP16.68■□□□□ 0.26
TSEN54-204ENST00000577197 NME9Q86XW9 330 aa16.67■□□□□ 0.26
TSEN54-204ENST00000577197 ABTB2Q8N961 1025 aa16.67■□□□□ 0.26
TSEN54-204ENST00000577197 ALS2Q96Q42 1657 aa16.66■□□□□ 0.26
TSEN54-204ENST00000577197 HSPA1LP34931 641 aa16.66■□□□□ 0.26
TSEN54-204ENST00000577197 COL3A1P02461 1466 aaPredicted RBP16.66■□□□□ 0.26
TSEN54-204ENST00000577197 SHPRHQ149N8 1683 aa16.65■□□□□ 0.26
TSEN54-204ENST00000577197 MARF1Q9Y4F3 1742 aaKnown RBP16.65■□□□□ 0.26
TSEN54-204ENST00000577197 MTHFSP49914 203 aa16.65■□□□□ 0.26
TSEN54-204ENST00000577197 NGEFQ8N5V2 710 aa16.65■□□□□ 0.26
TSEN54-204ENST00000577197 MAP2P11137 1827 aaKnown RBP16.65■□□□□ 0.26
TSEN54-204ENST00000577197 PHRF1Q9P1Y6 1649 aaKnown RBP16.64■□□□□ 0.25
TSEN54-204ENST00000577197 LMOD2Q6P5Q4 547 aa16.64■□□□□ 0.25
TSEN54-204ENST00000577197 JCADQ9P266 1359 aa16.64■□□□□ 0.25
TSEN54-204ENST00000577197 CNGB1Q14028 1251 aaPredicted RBP16.63■□□□□ 0.25
TSEN54-204ENST00000577197 SLIT3O75094 1523 aa16.63■□□□□ 0.25
TSEN54-204ENST00000577197 NLRP6P59044 892 aa16.62■□□□□ 0.25
TSEN54-204ENST00000577197 WDR43Q15061 677 aaKnown RBP eCLIP16.62■□□□□ 0.25
TSEN54-204ENST00000577197 NCBP3Q53F19 620 aaKnown RBP16.62■□□□□ 0.25
TSEN54-204ENST00000577197 FAM9BQ8IZU0 186 aa16.62■□□□□ 0.25
TSEN54-204ENST00000577197 POLKQ9UBT6 870 aa16.62■□□□□ 0.25
TSEN54-204ENST00000577197 MED1Q15648 1581 aaPredicted RBP16.62■□□□□ 0.25
TSEN54-204ENST00000577197 ZBED9Q6R2W3 1325 aa16.62■□□□□ 0.25
TSEN54-204ENST00000577197 RTL1A6NKG5 1358 aa16.62■□□□□ 0.25
TSEN54-204ENST00000577197 COL22A1Q8NFW1 1626 aaPredicted RBP16.61■□□□□ 0.25
TSEN54-204ENST00000577197 NUDCQ9Y266 331 aa16.61■□□□□ 0.25
TSEN54-204ENST00000577197 KCNH5Q8NCM2 988 aa16.6■□□□□ 0.25
TSEN54-204ENST00000577197 USP19O94966 1318 aa16.6■□□□□ 0.25
TSEN54-204ENST00000577197 ABCC6O95255 1503 aa16.6■□□□□ 0.25
TSEN54-204ENST00000577197 NUTM2GQ5VZR2 741 aa16.59■□□□□ 0.25
TSEN54-204ENST00000577197 NFAT5O94916 1531 aa16.59■□□□□ 0.25
TSEN54-204ENST00000577197 FLT4P35916 1363 aa16.57■□□□□ 0.24
TSEN54-204ENST00000577197 SPATA31A6Q5VVP1 1343 aa16.57■□□□□ 0.24
TSEN54-204ENST00000577197 TNNT2P45379 298 aaPredicted RBP16.57■□□□□ 0.24
TSEN54-204ENST00000577197 YTHDC1Q96MU7 727 aaKnown RBP16.57■□□□□ 0.24
TSEN54-204ENST00000577197 PNNQ9H307 717 aaKnown RBP16.57■□□□□ 0.24
TSEN54-204ENST00000577197 ZRANB1Q9UGI0 708 aa16.57■□□□□ 0.24
TSEN54-204ENST00000577197 DIAPH1O60610 1272 aaKnown RBP16.56■□□□□ 0.24
TSEN54-204ENST00000577197 HNRNPUQ00839 825 aaKnown RBP eCLIP16.56■□□□□ 0.24
TSEN54-204ENST00000577197 ADAMTS8Q9UP79 889 aa16.56■□□□□ 0.24
TSEN54-204ENST00000577197 CRYBG1Q9Y4K1 1723 aa16.56■□□□□ 0.24
TSEN54-204ENST00000577197 GCP02774 474 aa16.55■□□□□ 0.24
TSEN54-204ENST00000577197 HAP1P54257 671 aaPredicted RBP16.54■□□□□ 0.24
TSEN54-204ENST00000577197 PEAK1Q9H792 1746 aa16.53■□□□□ 0.24
TSEN54-204ENST00000577197 CABLES1Q8TDN4 633 aa16.53■□□□□ 0.24
TSEN54-204ENST00000577197 ABCA3Q99758 1704 aa16.53■□□□□ 0.24
TSEN54-204ENST00000577197 PDE3BQ13370 1112 aa16.52■□□□□ 0.24
TSEN54-204ENST00000577197 EMILIN1Q9Y6C2 1016 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms