RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-211ENST00000576502 CABP2Q9NPB3 220 aa19.61■□□□□ 0.73
NDE1-211ENST00000576502 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.61■□□□□ 0.73
NDE1-211ENST00000576502 PLEKHG5O94827 1062 aa19.6■□□□□ 0.73
NDE1-211ENST00000576502 CABLES1Q8TDN4 633 aa19.6■□□□□ 0.73
NDE1-211ENST00000576502 PCGF6Q9BYE7 350 aa19.6■□□□□ 0.73
NDE1-211ENST00000576502 ATRNO75882 1429 aa19.59■□□□□ 0.73
NDE1-211ENST00000576502 SBNO2Q9Y2G9 1366 aa19.59■□□□□ 0.73
NDE1-211ENST00000576502 UNC5CLQ8IV45 518 aa19.59■□□□□ 0.73
NDE1-211ENST00000576502 TIMELESSQ9UNS1 1208 aa19.58■□□□□ 0.72
NDE1-211ENST00000576502 NWD2Q9ULI1 1742 aa19.58■□□□□ 0.72
NDE1-211ENST00000576502 ATAD2Q6PL18 1390 aa19.57■□□□□ 0.72
NDE1-211ENST00000576502 SLIT2O94813 1529 aa19.57■□□□□ 0.72
NDE1-211ENST00000576502 BCL9LQ86UU0 1499 aa19.57■□□□□ 0.72
NDE1-211ENST00000576502 SLC24A1O60721 1099 aa19.57■□□□□ 0.72
NDE1-211ENST00000576502 PLCH1Q4KWH8 1693 aa19.55■□□□□ 0.72
NDE1-211ENST00000576502 RGS12O14924 1447 aa19.54■□□□□ 0.72
NDE1-211ENST00000576502 ABTB2Q8N961 1025 aa19.54■□□□□ 0.72
NDE1-211ENST00000576502 CABP1Q9NZU7 370 aa19.54■□□□□ 0.72
NDE1-211ENST00000576502 COL14A1Q05707 1796 aaKnown RBP19.53■□□□□ 0.72
NDE1-211ENST00000576502 GJD4Q96KN9 370 aaPredicted RBP19.53■□□□□ 0.72
NDE1-211ENST00000576502 ZNF692Q9BU19 519 aaPredicted RBP19.53■□□□□ 0.72
NDE1-211ENST00000576502 NLRP13Q86W25 1043 aa19.52■□□□□ 0.72
NDE1-211ENST00000576502 PRDM11Q9NQV5 511 aa19.52■□□□□ 0.72
NDE1-211ENST00000576502 CRYBG1Q9Y4K1 1723 aa19.51■□□□□ 0.71
NDE1-211ENST00000576502 USP6P35125 1406 aa19.51■□□□□ 0.71
NDE1-211ENST00000576502 FAM83GA6ND36 823 aa19.5■□□□□ 0.71
NDE1-211ENST00000576502 VPS72Q15906 364 aa19.5■□□□□ 0.71
NDE1-211ENST00000576502 CCDC9Q9Y3X0 531 aaKnown RBP19.5■□□□□ 0.71
NDE1-211ENST00000576502 PHRF1Q9P1Y6 1649 aaKnown RBP19.49■□□□□ 0.71
NDE1-211ENST00000576502 NUTM2GQ5VZR2 741 aa19.48■□□□□ 0.71
NDE1-211ENST00000576502 BTG4Q9NY30 223 aa19.48■□□□□ 0.71
NDE1-211ENST00000576502 CCER1Q8TC90 406 aaPredicted RBP19.47■□□□□ 0.71
NDE1-211ENST00000576502 PUS7Q96PZ0 661 aaKnown RBP19.47■□□□□ 0.71
NDE1-211ENST00000576502 AKAP12Q02952 1782 aa19.47■□□□□ 0.71
NDE1-211ENST00000576502 USP19O94966 1318 aa19.46■□□□□ 0.71
NDE1-211ENST00000576502 KIAA0232Q92628 1395 aa19.45■□□□□ 0.7
NDE1-211ENST00000576502 TTC21AQ8NDW8 1320 aa19.45■□□□□ 0.7
NDE1-211ENST00000576502 NRAPQ86VF7 1730 aa19.45■□□□□ 0.7
NDE1-211ENST00000576502 NLRP6P59044 892 aa19.44■□□□□ 0.7
NDE1-211ENST00000576502 HDGFL2Q7Z4V5 671 aaPredicted RBP19.44■□□□□ 0.7
NDE1-211ENST00000576502 UPF1Q92900 1129 aaKnown RBP eCLIP19.44■□□□□ 0.71e-7■□□□□ 10.4
NDE1-211ENST00000576502 GLI3P10071 1580 aa19.44■□□□□ 0.7
NDE1-211ENST00000576502 KTN1Q86UP2 1357 aaKnown RBP19.44■□□□□ 0.7
NDE1-211ENST00000576502 ST20-MTHFSA0A0A6YYL1 179 aa19.43■□□□□ 0.7
NDE1-211ENST00000576502 ZC3H6P61129 1189 aaKnown RBP19.43■□□□□ 0.7
NDE1-211ENST00000576502 TMC1Q8TDI8 760 aa19.43■□□□□ 0.7
NDE1-211ENST00000576502 NRKQ7Z2Y5 1582 aa19.43■□□□□ 0.7
NDE1-211ENST00000576502 CPDO75976 1380 aa19.43■□□□□ 0.7
NDE1-211ENST00000576502 NINLQ9Y2I6 1382 aa19.43■□□□□ 0.7
NDE1-211ENST00000576502 TERF2IPQ9NYB0 399 aa19.42■□□□□ 0.7
NDE1-211ENST00000576502 USP47Q96K76 1375 aa19.42■□□□□ 0.7
NDE1-211ENST00000576502 CPSF1Q10570 1443 aaKnown RBP19.42■□□□□ 0.7
NDE1-211ENST00000576502 GCP02774 474 aa19.41■□□□□ 0.7
NDE1-211ENST00000576502 TTC21BQ7Z4L5 1316 aa19.41■□□□□ 0.7
NDE1-211ENST00000576502 SSH2Q76I76 1423 aa19.41■□□□□ 0.7
NDE1-211ENST00000576502 A0A0G2JS52 829 aa19.4■□□□□ 0.7
NDE1-211ENST00000576502 EVA1CP58658 441 aa19.4■□□□□ 0.7
NDE1-211ENST00000576502 TMF1P82094 1093 aa19.4■□□□□ 0.7
NDE1-211ENST00000576502 MYT1Q01538 1121 aa19.4■□□□□ 0.7
NDE1-211ENST00000576502 CDCA8Q53HL2 280 aa19.4■□□□□ 0.7
NDE1-211ENST00000576502 MON2Q7Z3U7 1717 aa19.39■□□□□ 0.7
NDE1-211ENST00000576502 CHRNA2Q15822 529 aa19.39■□□□□ 0.69
NDE1-211ENST00000576502 KCNH5Q8NCM2 988 aa19.39■□□□□ 0.69
NDE1-211ENST00000576502 PIK3C2AO00443 1686 aa19.39■□□□□ 0.69
NDE1-211ENST00000576502 SLIT3O75094 1523 aa19.38■□□□□ 0.69
NDE1-211ENST00000576502 SEPT12Q8IYM1 358 aa19.38■□□□□ 0.69
NDE1-211ENST00000576502 TESK2Q96S53 571 aa19.38■□□□□ 0.69
NDE1-211ENST00000576502 SPATA31A5Q5VU36 1347 aa19.37■□□□□ 0.69
NDE1-211ENST00000576502 SPATA31A7Q8IWB4 1347 aa19.37■□□□□ 0.69
NDE1-211ENST00000576502 ONECUT3O60422 494 aaPredicted RBP19.37■□□□□ 0.69
NDE1-211ENST00000576502 STRN4Q9NRL3 753 aa19.37■□□□□ 0.69
NDE1-211ENST00000576502 CCDC125Q86Z20 511 aa19.36■□□□□ 0.69
NDE1-211ENST00000576502 EDC4Q6P2E9 1401 aaKnown RBP19.34■□□□□ 0.69
NDE1-211ENST00000576502 ZBTB7CA1YPR0 619 aa19.34■□□□□ 0.69
NDE1-211ENST00000576502 FAM98CQ17RN3 349 aaKnown RBP19.34■□□□□ 0.69
NDE1-211ENST00000576502 SLC12A5Q9H2X9 1139 aa19.34■□□□□ 0.69
NDE1-211ENST00000576502 BRWD3Q6RI45 1802 aa19.33■□□□□ 0.69
NDE1-211ENST00000576502 KRT27Q7Z3Y8 459 aa19.33■□□□□ 0.68
NDE1-211ENST00000576502 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.33■□□□□ 0.68
NDE1-211ENST00000576502 LMO7Q8WWI1 1683 aa19.33■□□□□ 0.68
NDE1-211ENST00000576502 AATKQ6ZMQ8 1374 aa19.32■□□□□ 0.68
NDE1-211ENST00000576502 SPATA31A1Q5TZJ5 1347 aa19.32■□□□□ 0.68
NDE1-211ENST00000576502 A0A1W2PP64 1363 aa19.32■□□□□ 0.68
NDE1-211ENST00000576502 CD163L1Q9NR16 1453 aa19.31■□□□□ 0.68
NDE1-211ENST00000576502 USP31Q70CQ4 1352 aa19.31■□□□□ 0.68
NDE1-211ENST00000576502 CAMTA1Q9Y6Y1 1673 aa19.3■□□□□ 0.68
NDE1-211ENST00000576502 SF3B2Q13435 895 aaKnown RBP19.3■□□□□ 0.68
NDE1-211ENST00000576502 USP54Q70EL1 1684 aa19.3■□□□□ 0.68
NDE1-211ENST00000576502 THRAP3Q9Y2W1 955 aaKnown RBP19.29■□□□□ 0.68
NDE1-211ENST00000576502 COL5A2P05997 1499 aaPredicted RBP19.28■□□□□ 0.68
NDE1-211ENST00000576502 SOX12O15370 315 aa19.28■□□□□ 0.68
NDE1-211ENST00000576502 BARGINQ6ZT62 677 aa19.28■□□□□ 0.68
NDE1-211ENST00000576502 TCP11L2Q8N4U5 519 aa19.28■□□□□ 0.68
NDE1-211ENST00000576502 ABCC6O95255 1503 aa19.28■□□□□ 0.68
NDE1-211ENST00000576502 ANKRD36BQ8N2N9 1353 aa19.28■□□□□ 0.68
NDE1-211ENST00000576502 BLMP54132 1417 aaPredicted RBP19.27■□□□□ 0.68
NDE1-211ENST00000576502 LARP1Q6PKG0 1096 aaKnown RBP19.27■□□□□ 0.68
NDE1-211ENST00000576502 ARHGEF25Q86VW2 580 aa19.27■□□□□ 0.68
NDE1-211ENST00000576502 USP35Q9P2H5 1018 aa19.27■□□□□ 0.68
NDE1-211ENST00000576502 THSD7AQ9UPZ6 1657 aa19.27■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms