RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 ARHGEF10O15013 1369 aa12.45□□□□□ -0.42
SMG6-216ENST00000575176 KRT28Q7Z3Y7 464 aa12.45□□□□□ -0.42
SMG6-216ENST00000575176 NFAT5O94916 1531 aa12.45□□□□□ -0.42
SMG6-216ENST00000575176 RGS12O14924 1447 aa12.45□□□□□ -0.42
SMG6-216ENST00000575176 ACEP12821 1306 aa12.44□□□□□ -0.42
SMG6-216ENST00000575176 CABP2Q9NPB3 220 aa12.44□□□□□ -0.42
SMG6-216ENST00000575176 USP47Q96K76 1375 aa12.43□□□□□ -0.42
SMG6-216ENST00000575176 AFF2P51816 1311 aa12.43□□□□□ -0.42
SMG6-216ENST00000575176 THSD7AQ9UPZ6 1657 aa12.43□□□□□ -0.42
SMG6-216ENST00000575176 CARD11Q9BXL7 1154 aa12.43□□□□□ -0.42
SMG6-216ENST00000575176 CCDC61Q9Y6R9 512 aa12.43□□□□□ -0.42
SMG6-216ENST00000575176 RGPD5Q99666 1765 aa12.43□□□□□ -0.42
SMG6-216ENST00000575176 USP19O94966 1318 aa12.42□□□□□ -0.42
SMG6-216ENST00000575176 NUTM2BA6NNL0 878 aaPredicted RBP12.42□□□□□ -0.42
SMG6-216ENST00000575176 NUTM2EB1AL46 878 aaPredicted RBP12.42□□□□□ -0.42
SMG6-216ENST00000575176 NUTM2AQ8IVF1 878 aaPredicted RBP12.42□□□□□ -0.42
SMG6-216ENST00000575176 LTN1O94822 1766 aa12.42□□□□□ -0.42
SMG6-216ENST00000575176 KIF20BQ96Q89 1820 aa12.41□□□□□ -0.42
SMG6-216ENST00000575176 FNBP4Q8N3X1 1017 aaPredicted RBP12.41□□□□□ -0.42
SMG6-216ENST00000575176 PHF23Q9BUL5 403 aaPredicted RBP12.41□□□□□ -0.42
SMG6-216ENST00000575176 TIMELESSQ9UNS1 1208 aa12.41□□□□□ -0.42
SMG6-216ENST00000575176 ATAD2Q6PL18 1390 aa12.41□□□□□ -0.42
SMG6-216ENST00000575176 CABLES1Q8TDN4 633 aa12.4□□□□□ -0.42
SMG6-216ENST00000575176 EVC2Q86UK5 1308 aa12.39□□□□□ -0.43
SMG6-216ENST00000575176 ADAMTS2O95450 1211 aa12.39□□□□□ -0.43
SMG6-216ENST00000575176 C8orf37Q96NL8 207 aa12.39□□□□□ -0.43
SMG6-216ENST00000575176 BRD4O60885 1362 aaPredicted RBP12.39□□□□□ -0.43
SMG6-216ENST00000575176 ANKRD26Q9UPS8 1709 aa12.38□□□□□ -0.43
SMG6-216ENST00000575176 SOCS7O14512 581 aa12.38□□□□□ -0.43
SMG6-216ENST00000575176 SRPK2P78362 688 aaKnown RBP12.38□□□□□ -0.43
SMG6-216ENST00000575176 A0A1W2PP64 1363 aa12.38□□□□□ -0.43
SMG6-216ENST00000575176 CAMTA1Q9Y6Y1 1673 aa12.38□□□□□ -0.43
SMG6-216ENST00000575176 ABCC6O95255 1503 aa12.37□□□□□ -0.43
SMG6-216ENST00000575176 ST20-MTHFSA0A0A6YYL1 179 aa12.37□□□□□ -0.43
SMG6-216ENST00000575176 PSME1Q06323 249 aa12.37□□□□□ -0.43
SMG6-216ENST00000575176 OVOS2A0A0J9YW53 1432 aa12.37□□□□□ -0.43
SMG6-216ENST00000575176 OVOS2Q6IE36 1432 aa12.37□□□□□ -0.43
SMG6-216ENST00000575176 CPDO75976 1380 aa12.36□□□□□ -0.43
SMG6-216ENST00000575176 NGDNQ8NEJ9 315 aaKnown RBP12.36□□□□□ -0.43
SMG6-216ENST00000575176 CABP1Q9NZU7 370 aa12.36□□□□□ -0.43
SMG6-216ENST00000575176 MEX3CQ5U5Q3 659 aaKnown RBP12.35□□□□□ -0.43
SMG6-216ENST00000575176 ZNF772Q68DY9 489 aaPredicted RBP12.35□□□□□ -0.43
SMG6-216ENST00000575176 PARP4Q9UKK3 1724 aaKnown RBP12.34□□□□□ -0.43
SMG6-216ENST00000575176 KIAA0232Q92628 1395 aa12.34□□□□□ -0.43
SMG6-216ENST00000575176 PUS7Q96PZ0 661 aaKnown RBP12.34□□□□□ -0.43
SMG6-216ENST00000575176 EDC4Q6P2E9 1401 aaKnown RBP12.34□□□□□ -0.43
SMG6-216ENST00000575176 COL5A2P05997 1499 aaPredicted RBP12.34□□□□□ -0.43
SMG6-216ENST00000575176 LRRC37A3O60309 1634 aa12.33□□□□□ -0.43
SMG6-216ENST00000575176 USP31Q70CQ4 1352 aa12.33□□□□□ -0.44
SMG6-216ENST00000575176 NINLQ9Y2I6 1382 aa12.33□□□□□ -0.44
SMG6-216ENST00000575176 CCER1Q8TC90 406 aaPredicted RBP12.33□□□□□ -0.44
SMG6-216ENST00000575176 PEAK1Q9H792 1746 aa12.33□□□□□ -0.44
SMG6-216ENST00000575176 TNS1Q9HBL0 1735 aaKnown RBP12.32□□□□□ -0.44
SMG6-216ENST00000575176 FAM83GA6ND36 823 aa12.32□□□□□ -0.44
SMG6-216ENST00000575176 TTC21BQ7Z4L5 1316 aa12.32□□□□□ -0.44
SMG6-216ENST00000575176 KTN1Q86UP2 1357 aaKnown RBP12.31□□□□□ -0.44
SMG6-216ENST00000575176 NGLY1Q96IV0 654 aa12.31□□□□□ -0.44
SMG6-216ENST00000575176 USP21Q9UK80 565 aa12.31□□□□□ -0.44
SMG6-216ENST00000575176 FAM208AQ9UK61 1670 aaKnown RBP12.31□□□□□ -0.44
SMG6-216ENST00000575176 ANKRD36BQ8N2N9 1353 aa12.3□□□□□ -0.44
SMG6-216ENST00000575176 RGPD2P0DJD1 1756 aa12.3□□□□□ -0.44
SMG6-216ENST00000575176 NUTM2GQ5VZR2 741 aa12.3□□□□□ -0.44
SMG6-216ENST00000575176 SHANK3Q9BYB0 1731 aa12.29□□□□□ -0.44
SMG6-216ENST00000575176 RBM6P78332 1123 aaKnown RBP12.29□□□□□ -0.44
SMG6-216ENST00000575176 UNC5CLQ8IV45 518 aa12.29□□□□□ -0.44
SMG6-216ENST00000575176 SLC12A5Q9H2X9 1139 aa12.29□□□□□ -0.44
SMG6-216ENST00000575176 QTRT2Q9H974 415 aaKnown RBP12.29□□□□□ -0.44
SMG6-216ENST00000575176 TTC21AQ8NDW8 1320 aa12.29□□□□□ -0.44
SMG6-216ENST00000575176 PAK3O75914 559 aaPredicted RBP12.28□□□□□ -0.44
SMG6-216ENST00000575176 LMOD2Q6P5Q4 547 aa12.28□□□□□ -0.44
SMG6-216ENST00000575176 TRPC5Q9UL62 973 aaPredicted RBP12.28□□□□□ -0.44
SMG6-216ENST00000575176 RXRBP28702 533 aa12.27□□□□□ -0.45
SMG6-216ENST00000575176 VPS72Q15906 364 aa12.27□□□□□ -0.45
SMG6-216ENST00000575176 ZRANB1Q9UGI0 708 aa12.27□□□□□ -0.45
SMG6-216ENST00000575176 SBF2Q86WG5 1849 aa12.27□□□□□ -0.45
SMG6-216ENST00000575176 ABTB2Q8N961 1025 aa12.26□□□□□ -0.45
SMG6-216ENST00000575176 GJD4Q96KN9 370 aaPredicted RBP12.26□□□□□ -0.45
SMG6-216ENST00000575176 AATKQ6ZMQ8 1374 aa12.26□□□□□ -0.45
SMG6-216ENST00000575176 PLEKHG5O94827 1062 aa12.25□□□□□ -0.45
SMG6-216ENST00000575176 GCP02774 474 aa12.25□□□□□ -0.45
SMG6-216ENST00000575176 CHRNA2Q15822 529 aa12.25□□□□□ -0.45
SMG6-216ENST00000575176 NME9Q86XW9 330 aa12.25□□□□□ -0.45
SMG6-216ENST00000575176 ZNF692Q9BU19 519 aaPredicted RBP12.25□□□□□ -0.45
SMG6-216ENST00000575176 BTG4Q9NY30 223 aa12.25□□□□□ -0.45
SMG6-216ENST00000575176 SPATA31A5Q5VU36 1347 aa12.25□□□□□ -0.45
SMG6-216ENST00000575176 SPATA31A7Q8IWB4 1347 aa12.25□□□□□ -0.45
SMG6-216ENST00000575176 RGPD1P0DJD0 1748 aa12.25□□□□□ -0.45
SMG6-216ENST00000575176 DISP2A7MBM2 1401 aa12.24□□□□□ -0.45
SMG6-216ENST00000575176 ONECUT3O60422 494 aaPredicted RBP12.24□□□□□ -0.45
SMG6-216ENST00000575176 HSPA5P11021 654 aaKnown RBP12.24□□□□□ -0.45
SMG6-216ENST00000575176 C11orf95C9JLR9 678 aaPredicted RBP12.23□□□□□ -0.45
SMG6-216ENST00000575176 ZC3H6P61129 1189 aaKnown RBP12.23□□□□□ -0.45
SMG6-216ENST00000575176 PRDM11Q9NQV5 511 aa12.23□□□□□ -0.45
SMG6-216ENST00000575176 NSD3Q9BZ95 1437 aa12.22□□□□□ -0.45
SMG6-216ENST00000575176 SPATA31A1Q5TZJ5 1347 aa12.22□□□□□ -0.45
SMG6-216ENST00000575176 TMF1P82094 1093 aa12.22□□□□□ -0.45
SMG6-216ENST00000575176 ARHGEF25Q86VW2 580 aa12.22□□□□□ -0.45
SMG6-216ENST00000575176 NLRP13Q86W25 1043 aa12.22□□□□□ -0.45
SMG6-216ENST00000575176 CARD14Q9BXL6 1004 aa12.22□□□□□ -0.45
SMG6-216ENST00000575176 MAP2P11137 1827 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms