RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-212ENST00000575116 BRINP3Q76B58 766 aa16.18■□□□□ 0.18
PRPF8-212ENST00000575116 FOXO3O43524 673 aa16.17■□□□□ 0.18
PRPF8-212ENST00000575116 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.17■□□□□ 0.18
PRPF8-212ENST00000575116 NPHP3Q7Z494 1330 aa16.17■□□□□ 0.18
PRPF8-212ENST00000575116 CCER2I3L3R5 266 aa16.16■□□□□ 0.18
PRPF8-212ENST00000575116 TOM1O60784 492 aa16.16■□□□□ 0.18
PRPF8-212ENST00000575116 KRT28Q7Z3Y7 464 aa16.16■□□□□ 0.18
PRPF8-212ENST00000575116 KIF20BQ96Q89 1820 aa16.16■□□□□ 0.18
PRPF8-212ENST00000575116 MORC1Q86VD1 984 aa16.15■□□□□ 0.18
PRPF8-212ENST00000575116 CERKQ8TCT0 537 aa16.15■□□□□ 0.18
PRPF8-212ENST00000575116 MYBBP1AQ9BQG0 1328 aaKnown RBP16.15■□□□□ 0.18
PRPF8-212ENST00000575116 ANKRD26Q9UPS8 1709 aa16.14■□□□□ 0.17
PRPF8-212ENST00000575116 GGNBP2Q9H3C7 697 aa16.14■□□□□ 0.17
PRPF8-212ENST00000575116 SCAF1Q9H7N4 1312 aaKnown RBP16.14■□□□□ 0.17
PRPF8-212ENST00000575116 USP31Q70CQ4 1352 aa16.13■□□□□ 0.17
PRPF8-212ENST00000575116 CNGB1Q14028 1251 aaPredicted RBP16.13■□□□□ 0.17
PRPF8-212ENST00000575116 NME9Q86XW9 330 aa16.13■□□□□ 0.17
PRPF8-212ENST00000575116 COG3Q96JB2 828 aa16.13■□□□□ 0.17
PRPF8-212ENST00000575116 SBNO1A3KN83 1393 aa16.13■□□□□ 0.17
PRPF8-212ENST00000575116 PAK3O75914 559 aaPredicted RBP16.11■□□□□ 0.17
PRPF8-212ENST00000575116 TRPM3Q9HCF6 1732 aaPredicted RBP16.11■□□□□ 0.17
PRPF8-212ENST00000575116 PPP2R1AP30153 589 aa16.1■□□□□ 0.17
PRPF8-212ENST00000575116 NLRP13Q86W25 1043 aa16.1■□□□□ 0.17
PRPF8-212ENST00000575116 ABTB2Q8N961 1025 aa16.1■□□□□ 0.17
PRPF8-212ENST00000575116 SOS2Q07890 1332 aaPredicted RBP16.1■□□□□ 0.17
PRPF8-212ENST00000575116 PXDNQ92626 1479 aa16.1■□□□□ 0.17
PRPF8-212ENST00000575116 USP54Q70EL1 1684 aa16.09■□□□□ 0.17
PRPF8-212ENST00000575116 OVOS2A0A0J9YW53 1432 aa16.09■□□□□ 0.17
PRPF8-212ENST00000575116 OVOS2Q6IE36 1432 aa16.09■□□□□ 0.17
PRPF8-212ENST00000575116 NHSL1Q5SYE7 1610 aa16.08■□□□□ 0.17
PRPF8-212ENST00000575116 NLRP6P59044 892 aa16.08■□□□□ 0.16
PRPF8-212ENST00000575116 ZRANB1Q9UGI0 708 aa16.08■□□□□ 0.16
PRPF8-212ENST00000575116 AATKQ6ZMQ8 1374 aa16.08■□□□□ 0.16
PRPF8-212ENST00000575116 PIK3C2AO00443 1686 aa16.08■□□□□ 0.16
PRPF8-212ENST00000575116 ROBO1Q9Y6N7 1651 aa16.08■□□□□ 0.16
PRPF8-212ENST00000575116 UBAP1LF5GYI3 381 aa16.07■□□□□ 0.16
PRPF8-212ENST00000575116 XPCQ01831 940 aaPredicted RBP16.07■□□□□ 0.16
PRPF8-212ENST00000575116 DDX17Q92841 729 aaKnown RBP16.07■□□□□ 0.16
PRPF8-212ENST00000575116 SPATA31A3Q5VYP0 1347 aa16.07■□□□□ 0.16
PRPF8-212ENST00000575116 ALS2Q96Q42 1657 aa16.06■□□□□ 0.16
PRPF8-212ENST00000575116 AHDC1Q5TGY3 1603 aaPredicted RBP16.05■□□□□ 0.16
PRPF8-212ENST00000575116 TNS3Q68CZ2 1445 aa16.05■□□□□ 0.16
PRPF8-212ENST00000575116 ARHGEF10O15013 1369 aa16.05■□□□□ 0.16
PRPF8-212ENST00000575116 TNNT2P45379 298 aaPredicted RBP16.04■□□□□ 0.16
PRPF8-212ENST00000575116 KCNH5Q8NCM2 988 aa16.04■□□□□ 0.16
PRPF8-212ENST00000575116 LRRC59Q96AG4 307 aaKnown RBP16.03■□□□□ 0.16
PRPF8-212ENST00000575116 MRS2Q9HD23 443 aa16.03■□□□□ 0.16
PRPF8-212ENST00000575116 USP19O94966 1318 aa16.02■□□□□ 0.16
PRPF8-212ENST00000575116 MTHFSP49914 203 aa16.02■□□□□ 0.16
PRPF8-212ENST00000575116 LMOD2Q6P5Q4 547 aa16.02■□□□□ 0.16
PRPF8-212ENST00000575116 POLKQ9UBT6 870 aa16.02■□□□□ 0.16
PRPF8-212ENST00000575116 MARF1Q9Y4F3 1742 aaKnown RBP16.02■□□□□ 0.15
PRPF8-212ENST00000575116 PIP4K2BP78356 416 aa16.01■□□□□ 0.15
PRPF8-212ENST00000575116 CCDC184Q52MB2 194 aa16.01■□□□□ 0.15
PRPF8-212ENST00000575116 NUTM2GQ5VZR2 741 aa16.01■□□□□ 0.15
PRPF8-212ENST00000575116 CFAP53Q96M91 514 aa16.01■□□□□ 0.15
PRPF8-212ENST00000575116 MAP2P11137 1827 aaKnown RBP16.01■□□□□ 0.15
PRPF8-212ENST00000575116 SMG6Q86US8 1419 aaKnown RBP16■□□□□ 0.15
PRPF8-212ENST00000575116 INSRP06213 1382 aa16■□□□□ 0.15
PRPF8-212ENST00000575116 KIF24Q5T7B8 1368 aa16■□□□□ 0.15
PRPF8-212ENST00000575116 SLIT3O75094 1523 aa15.99■□□□□ 0.15
PRPF8-212ENST00000575116 GCP02774 474 aa15.99■□□□□ 0.15
PRPF8-212ENST00000575116 MED1Q15648 1581 aaPredicted RBP15.99■□□□□ 0.15
PRPF8-212ENST00000575116 PNPLA6Q8IY17 1366 aa15.99■□□□□ 0.15
PRPF8-212ENST00000575116 PHLPP1O60346 1717 aa15.97■□□□□ 0.15
PRPF8-212ENST00000575116 FBLN1P23142 703 aa15.97■□□□□ 0.15
PRPF8-212ENST00000575116 PNISRQ8TF01 805 aaKnown RBP15.97■□□□□ 0.15
PRPF8-212ENST00000575116 NFAT5O94916 1531 aa15.96■□□□□ 0.15
PRPF8-212ENST00000575116 RRS1Q15050 365 aaKnown RBP15.96■□□□□ 0.15
PRPF8-212ENST00000575116 EMILIN1Q9Y6C2 1016 aa15.96■□□□□ 0.15
PRPF8-212ENST00000575116 CDK12Q9NYV4 1490 aaPredicted RBP15.95■□□□□ 0.14
PRPF8-212ENST00000575116 MAP3K19Q56UN5 1328 aa15.94■□□□□ 0.14
PRPF8-212ENST00000575116 COL16A1Q07092 1604 aaPredicted RBP15.94■□□□□ 0.14
PRPF8-212ENST00000575116 ARHGEF25Q86VW2 580 aa15.94■□□□□ 0.14
PRPF8-212ENST00000575116 RTL1A6NKG5 1358 aa15.94■□□□□ 0.14
PRPF8-212ENST00000575116 CRYBG1Q9Y4K1 1723 aa15.94■□□□□ 0.14
PRPF8-212ENST00000575116 FLT4P35916 1363 aa15.93■□□□□ 0.14
PRPF8-212ENST00000575116 PPM1GO15355 546 aaPredicted RBP15.93■□□□□ 0.14
PRPF8-212ENST00000575116 SOX12O15370 315 aa15.93■□□□□ 0.14
PRPF8-212ENST00000575116 AMPHP49418 695 aa15.93■□□□□ 0.14
PRPF8-212ENST00000575116 NUDCQ9Y266 331 aa15.93■□□□□ 0.14
PRPF8-212ENST00000575116 PHRF1Q9P1Y6 1649 aaKnown RBP15.93■□□□□ 0.14
PRPF8-212ENST00000575116 DIAPH1O60610 1272 aaKnown RBP15.92■□□□□ 0.14
PRPF8-212ENST00000575116 IP6K1Q92551 441 aa15.92■□□□□ 0.14
PRPF8-212ENST00000575116 COL22A1Q8NFW1 1626 aaPredicted RBP15.92■□□□□ 0.14
PRPF8-212ENST00000575116 COL3A1P02461 1466 aaPredicted RBP15.91■□□□□ 0.14
PRPF8-212ENST00000575116 CPDO75976 1380 aa15.91■□□□□ 0.14
PRPF8-212ENST00000575116 HOXC9P31274 260 aa15.91■□□□□ 0.14
PRPF8-212ENST00000575116 WDR43Q15061 677 aaKnown RBP eCLIP15.91■□□□□ 0.14
PRPF8-212ENST00000575116 FAM9BQ8IZU0 186 aa15.91■□□□□ 0.14
PRPF8-212ENST00000575116 CABLES1Q8TDN4 633 aa15.91■□□□□ 0.14
PRPF8-212ENST00000575116 PEAK1Q9H792 1746 aa15.9■□□□□ 0.14
PRPF8-212ENST00000575116 LTN1O94822 1766 aa15.9■□□□□ 0.14
PRPF8-212ENST00000575116 HAP1P54257 671 aaPredicted RBP15.89■□□□□ 0.13
PRPF8-212ENST00000575116 ABCC6O95255 1503 aa15.89■□□□□ 0.13
PRPF8-212ENST00000575116 IL13P35225 146 aa15.88■□□□□ 0.13
PRPF8-212ENST00000575116 ZC3H6P61129 1189 aaKnown RBP15.88■□□□□ 0.13
PRPF8-212ENST00000575116 HSP90AB2PQ58FF8 381 aa15.88■□□□□ 0.13
PRPF8-212ENST00000575116 ABCA3Q99758 1704 aa15.88■□□□□ 0.13
PRPF8-212ENST00000575116 JCADQ9P266 1359 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms