RNA–Protein interactions for RNA: ENST00000574490.1

FXR2-206, Transcript of FMR1 autosomal homolog 2, humanhuman

TSL 3

Gene FXR2, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR2-206ENST00000574490 ABCA3Q99758 1704 aa17.48■□□□□ 0.39
FXR2-206ENST00000574490 NWD2Q9ULI1 1742 aa17.48■□□□□ 0.39
FXR2-206ENST00000574490 NBPF8Q3BBV2 869 aa17.48■□□□□ 0.39
FXR2-206ENST00000574490 PAK3O75914 559 aaPredicted RBP17.47■□□□□ 0.39
FXR2-206ENST00000574490 GJD4Q96KN9 370 aaPredicted RBP17.47■□□□□ 0.39
FXR2-206ENST00000574490 RALGAPBQ86X10 1494 aa17.47■□□□□ 0.39
FXR2-206ENST00000574490 PPIP5K1Q6PFW1 1433 aa17.47■□□□□ 0.39
FXR2-206ENST00000574490 CLSPNQ9HAW4 1339 aa17.47■□□□□ 0.39
FXR2-206ENST00000574490 EP400Q96L91 3159 aa17.45■□□□□ 0.38
FXR2-206ENST00000574490 SLC24A1O60721 1099 aa17.45■□□□□ 0.38
FXR2-206ENST00000574490 CABLES1Q8TDN4 633 aa17.45■□□□□ 0.38
FXR2-206ENST00000574490 VPS72Q15906 364 aa17.44■□□□□ 0.38
FXR2-206ENST00000574490 CARD11Q9BXL7 1154 aa17.44■□□□□ 0.38
FXR2-206ENST00000574490 CABP2Q9NPB3 220 aa17.44■□□□□ 0.38
FXR2-206ENST00000574490 ATAD2Q6PL18 1390 aa17.43■□□□□ 0.38
FXR2-206ENST00000574490 TIMELESSQ9UNS1 1208 aa17.43■□□□□ 0.38
FXR2-206ENST00000574490 COL14A1Q05707 1796 aaKnown RBP17.43■□□□□ 0.38
FXR2-206ENST00000574490 CRYBG1Q9Y4K1 1723 aa17.42■□□□□ 0.38
FXR2-206ENST00000574490 UPF1Q92900 1129 aaKnown RBP eCLIP17.42■□□□□ 0.38
FXR2-206ENST00000574490 PLCH1Q4KWH8 1693 aa17.42■□□□□ 0.38
FXR2-206ENST00000574490 FAM83GA6ND36 823 aa17.41■□□□□ 0.38
FXR2-206ENST00000574490 ZNF692Q9BU19 519 aaPredicted RBP17.41■□□□□ 0.38
FXR2-206ENST00000574490 ABTB2Q8N961 1025 aa17.4■□□□□ 0.38
FXR2-206ENST00000574490 PUS7Q96PZ0 661 aaKnown RBP17.4■□□□□ 0.38
FXR2-206ENST00000574490 CABP1Q9NZU7 370 aa17.4■□□□□ 0.38
FXR2-206ENST00000574490 USP6P35125 1406 aa17.39■□□□□ 0.38
FXR2-206ENST00000574490 ONECUT3O60422 494 aaPredicted RBP17.39■□□□□ 0.37
FXR2-206ENST00000574490 NLRP13Q86W25 1043 aa17.39■□□□□ 0.37
FXR2-206ENST00000574490 PRDM11Q9NQV5 511 aa17.38■□□□□ 0.37
FXR2-206ENST00000574490 USP19O94966 1318 aa17.38■□□□□ 0.37
FXR2-206ENST00000574490 CPDO75976 1380 aa17.38■□□□□ 0.37
FXR2-206ENST00000574490 GLI3P10071 1580 aa17.37■□□□□ 0.37
FXR2-206ENST00000574490 PHRF1Q9P1Y6 1649 aaKnown RBP17.37■□□□□ 0.37
FXR2-206ENST00000574490 BTG4Q9NY30 223 aa17.37■□□□□ 0.37
FXR2-206ENST00000574490 CCDC125Q86Z20 511 aa17.36■□□□□ 0.37
FXR2-206ENST00000574490 SSH2Q76I76 1423 aa17.36■□□□□ 0.37
FXR2-206ENST00000574490 NRAPQ86VF7 1730 aa17.35■□□□□ 0.37
FXR2-206ENST00000574490 PLEKHG5O94827 1062 aa17.35■□□□□ 0.37
FXR2-206ENST00000574490 KIAA0232Q92628 1395 aa17.35■□□□□ 0.37
FXR2-206ENST00000574490 CPSF1Q10570 1443 aaKnown RBP17.34■□□□□ 0.37
FXR2-206ENST00000574490 TTC21AQ8NDW8 1320 aa17.34■□□□□ 0.37
FXR2-206ENST00000574490 NRKQ7Z2Y5 1582 aa17.33■□□□□ 0.37
FXR2-206ENST00000574490 CCDC9Q9Y3X0 531 aaKnown RBP17.33■□□□□ 0.36
FXR2-206ENST00000574490 NINLQ9Y2I6 1382 aa17.32■□□□□ 0.36
FXR2-206ENST00000574490 GCP02774 474 aa17.32■□□□□ 0.36
FXR2-206ENST00000574490 SPATA31A5Q5VU36 1347 aa17.31■□□□□ 0.36
FXR2-206ENST00000574490 SPATA31A7Q8IWB4 1347 aa17.31■□□□□ 0.36
FXR2-206ENST00000574490 SEPT12Q8IYM1 358 aa17.31■□□□□ 0.36
FXR2-206ENST00000574490 AKAP12Q02952 1782 aa17.3■□□□□ 0.36
FXR2-206ENST00000574490 NLRP6P59044 892 aa17.3■□□□□ 0.36
FXR2-206ENST00000574490 NUTM2GQ5VZR2 741 aa17.3■□□□□ 0.36
FXR2-206ENST00000574490 SLIT3O75094 1523 aa17.3■□□□□ 0.36
FXR2-206ENST00000574490 KTN1Q86UP2 1357 aaKnown RBP17.29■□□□□ 0.36
FXR2-206ENST00000574490 TTC21BQ7Z4L5 1316 aa17.29■□□□□ 0.36
FXR2-206ENST00000574490 ZC3H6P61129 1189 aaKnown RBP17.29■□□□□ 0.36
FXR2-206ENST00000574490 KCNH5Q8NCM2 988 aa17.29■□□□□ 0.36
FXR2-206ENST00000574490 TERF2IPQ9NYB0 399 aa17.28■□□□□ 0.36
FXR2-206ENST00000574490 PIK3C2AO00443 1686 aa17.27■□□□□ 0.36
FXR2-206ENST00000574490 ST20-MTHFSA0A0A6YYL1 179 aa17.27■□□□□ 0.36
FXR2-206ENST00000574490 HDGFL2Q7Z4V5 671 aaPredicted RBP17.27■□□□□ 0.36
FXR2-206ENST00000574490 TESK2Q96S53 571 aa17.27■□□□□ 0.36
FXR2-206ENST00000574490 AATKQ6ZMQ8 1374 aa17.27■□□□□ 0.35
FXR2-206ENST00000574490 LMO7Q8WWI1 1683 aa17.26■□□□□ 0.35
FXR2-206ENST00000574490 SPATA31A1Q5TZJ5 1347 aa17.26■□□□□ 0.35
FXR2-206ENST00000574490 EVA1CP58658 441 aa17.26■□□□□ 0.35
FXR2-206ENST00000574490 CHRNA2Q15822 529 aa17.26■□□□□ 0.35
FXR2-206ENST00000574490 KRT27Q7Z3Y8 459 aa17.26■□□□□ 0.35
FXR2-206ENST00000574490 PCGF6Q9BYE7 350 aa17.26■□□□□ 0.35
FXR2-206ENST00000574490 MON2Q7Z3U7 1717 aa17.26■□□□□ 0.35
FXR2-206ENST00000574490 FAM98CQ17RN3 349 aaKnown RBP17.25■□□□□ 0.35
FXR2-206ENST00000574490 THRAP3Q9Y2W1 955 aaKnown RBP17.25■□□□□ 0.35
FXR2-206ENST00000574490 USP31Q70CQ4 1352 aa17.25■□□□□ 0.35
FXR2-206ENST00000574490 USP47Q96K76 1375 aa17.25■□□□□ 0.35
FXR2-206ENST00000574490 BLMP54132 1417 aaPredicted RBP17.24■□□□□ 0.35
FXR2-206ENST00000574490 EDC4Q6P2E9 1401 aaKnown RBP17.24■□□□□ 0.35
FXR2-206ENST00000574490 CDCA8Q53HL2 280 aa17.24■□□□□ 0.35
FXR2-206ENST00000574490 BARGINQ6ZT62 677 aa17.24■□□□□ 0.35
FXR2-206ENST00000574490 CD163L1Q9NR16 1453 aa17.24■□□□□ 0.35
FXR2-206ENST00000574490 CAMTA1Q9Y6Y1 1673 aa17.23■□□□□ 0.35
FXR2-206ENST00000574490 ABCC6O95255 1503 aa17.23■□□□□ 0.35
FXR2-206ENST00000574490 TMF1P82094 1093 aa17.23■□□□□ 0.35
FXR2-206ENST00000574490 TMC1Q8TDI8 760 aa17.23■□□□□ 0.35
FXR2-206ENST00000574490 THSD7AQ9UPZ6 1657 aa17.23■□□□□ 0.35
FXR2-206ENST00000574490 BRWD3Q6RI45 1802 aa17.22■□□□□ 0.35
FXR2-206ENST00000574490 A0A0G2JS52 829 aa17.22■□□□□ 0.35
FXR2-206ENST00000574490 MYT1Q01538 1121 aa17.22■□□□□ 0.35
FXR2-206ENST00000574490 STRN4Q9NRL3 753 aa17.22■□□□□ 0.35
FXR2-206ENST00000574490 COL5A2P05997 1499 aaPredicted RBP17.22■□□□□ 0.35
FXR2-206ENST00000574490 USP54Q70EL1 1684 aa17.22■□□□□ 0.35
FXR2-206ENST00000574490 SLC12A5Q9H2X9 1139 aa17.21■□□□□ 0.35
FXR2-206ENST00000574490 SF3B2Q13435 895 aaKnown RBP17.2■□□□□ 0.34
FXR2-206ENST00000574490 ARHGEF25Q86VW2 580 aa17.2■□□□□ 0.34
FXR2-206ENST00000574490 TCP11L2Q8N4U5 519 aa17.2■□□□□ 0.34
FXR2-206ENST00000574490 CRB1P82279 1406 aa17.2■□□□□ 0.34
FXR2-206ENST00000574490 A0A1W2PP64 1363 aa17.19■□□□□ 0.34
FXR2-206ENST00000574490 C11orf95C9JLR9 678 aaPredicted RBP17.19■□□□□ 0.34
FXR2-206ENST00000574490 NFAT5O94916 1531 aa17.18■□□□□ 0.34
FXR2-206ENST00000574490 LARP1Q6PKG0 1096 aaKnown RBP17.18■□□□□ 0.34
FXR2-206ENST00000574490 SRCAPQ6ZRS2 3230 aa17.17■□□□□ 0.34
FXR2-206ENST00000574490 CCER1Q8TC90 406 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms