RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.81□□□□□ -0.2
NDE1-210ENST00000574163 PUS7Q96PZ0 661 aaKnown RBP13.81□□□□□ -0.2
NDE1-210ENST00000574163 CABP2Q9NPB3 220 aa13.81□□□□□ -0.2
NDE1-210ENST00000574163 PHRF1Q9P1Y6 1649 aaKnown RBP13.81□□□□□ -0.2
NDE1-210ENST00000574163 ACEP12821 1306 aa13.81□□□□□ -0.2
NDE1-210ENST00000574163 USP6P35125 1406 aa13.81□□□□□ -0.2
NDE1-210ENST00000574163 NUTM2BA6NNL0 878 aaPredicted RBP13.8□□□□□ -0.2
NDE1-210ENST00000574163 NUTM2EB1AL46 878 aaPredicted RBP13.8□□□□□ -0.2
NDE1-210ENST00000574163 NUTM2AQ8IVF1 878 aaPredicted RBP13.8□□□□□ -0.2
NDE1-210ENST00000574163 TESK2Q96S53 571 aa13.8□□□□□ -0.2
NDE1-210ENST00000574163 NINLQ9Y2I6 1382 aa13.8□□□□□ -0.2
NDE1-210ENST00000574163 NWD2Q9ULI1 1742 aa13.79□□□□□ -0.2
NDE1-210ENST00000574163 RGS17Q9UGC6 210 aaPredicted RBP13.79□□□□□ -0.2
NDE1-210ENST00000574163 ZNF772Q68DY9 489 aaPredicted RBP13.78□□□□□ -0.2
NDE1-210ENST00000574163 CPSF1Q10570 1443 aaKnown RBP13.78□□□□□ -0.2
NDE1-210ENST00000574163 PLCH1Q4KWH8 1693 aa13.78□□□□□ -0.2
NDE1-210ENST00000574163 USP54Q70EL1 1684 aa13.78□□□□□ -0.2
NDE1-210ENST00000574163 ST20-MTHFSA0A0A6YYL1 179 aa13.77□□□□□ -0.21
NDE1-210ENST00000574163 PIK3C2AO00443 1686 aa13.77□□□□□ -0.21
NDE1-210ENST00000574163 SSH2Q76I76 1423 aa13.77□□□□□ -0.21
NDE1-210ENST00000574163 AFF2P51816 1311 aa13.76□□□□□ -0.21
NDE1-210ENST00000574163 COL14A1Q05707 1796 aaKnown RBP13.76□□□□□ -0.21
NDE1-210ENST00000574163 SLIT2O94813 1529 aa13.75□□□□□ -0.21
NDE1-210ENST00000574163 CDK12Q9NYV4 1490 aaPredicted RBP13.75□□□□□ -0.21
NDE1-210ENST00000574163 FOXD4L1Q9NU39 408 aa13.75□□□□□ -0.21
NDE1-210ENST00000574163 CABP1Q9NZU7 370 aa13.75□□□□□ -0.21
NDE1-210ENST00000574163 SLIT3O75094 1523 aa13.74□□□□□ -0.21
NDE1-210ENST00000574163 CD163L1Q9NR16 1453 aa13.74□□□□□ -0.21
NDE1-210ENST00000574163 USP19O94966 1318 aa13.74□□□□□ -0.21
NDE1-210ENST00000574163 ADAMTS2O95450 1211 aa13.74□□□□□ -0.21
NDE1-210ENST00000574163 LMOD2Q6P5Q4 547 aa13.74□□□□□ -0.21
NDE1-210ENST00000574163 ILDR2Q71H61 639 aa13.74□□□□□ -0.21
NDE1-210ENST00000574163 C8orf37Q96NL8 207 aa13.74□□□□□ -0.21
NDE1-210ENST00000574163 ZNF692Q9BU19 519 aaPredicted RBP13.74□□□□□ -0.21
NDE1-210ENST00000574163 MYOM1P52179 1685 aa13.74□□□□□ -0.21
NDE1-210ENST00000574163 NRAPQ86VF7 1730 aa13.73□□□□□ -0.21
NDE1-210ENST00000574163 PAK3O75914 559 aaPredicted RBP13.73□□□□□ -0.21
NDE1-210ENST00000574163 POTEAQ6S8J7 498 aa13.73□□□□□ -0.21
NDE1-210ENST00000574163 FNBP4Q8N3X1 1017 aaPredicted RBP13.73□□□□□ -0.21
NDE1-210ENST00000574163 ATRNO75882 1429 aa13.73□□□□□ -0.21
NDE1-210ENST00000574163 EDC4Q6P2E9 1401 aaKnown RBP13.73□□□□□ -0.21
NDE1-210ENST00000574163 TTC21AQ8NDW8 1320 aa13.72□□□□□ -0.21
NDE1-210ENST00000574163 HAP1P54257 671 aaPredicted RBP13.72□□□□□ -0.21
NDE1-210ENST00000574163 TMF1P82094 1093 aa13.72□□□□□ -0.21
NDE1-210ENST00000574163 CDCA8Q53HL2 280 aa13.72□□□□□ -0.21
NDE1-210ENST00000574163 NGLY1Q96IV0 654 aa13.72□□□□□ -0.21
NDE1-210ENST00000574163 KTN1Q86UP2 1357 aaKnown RBP13.71□□□□□ -0.21
NDE1-210ENST00000574163 BCL9LQ86UU0 1499 aa13.71□□□□□ -0.21
NDE1-210ENST00000574163 CABLES1Q8TDN4 633 aa13.7□□□□□ -0.22
NDE1-210ENST00000574163 A0A1W2PP64 1363 aa13.7□□□□□ -0.22
NDE1-210ENST00000574163 CPDO75976 1380 aa13.7□□□□□ -0.22
NDE1-210ENST00000574163 LMO7Q8WWI1 1683 aa13.69□□□□□ -0.22
NDE1-210ENST00000574163 EIF4G2P78344 907 aaKnown RBP eCLIP13.69□□□□□ -0.22
NDE1-210ENST00000574163 HDGFL2Q7Z4V5 671 aaPredicted RBP13.69□□□□□ -0.22
NDE1-210ENST00000574163 ABTB2Q8N961 1025 aa13.69□□□□□ -0.22
NDE1-210ENST00000574163 TERF2IPQ9NYB0 399 aa13.69□□□□□ -0.22
NDE1-210ENST00000574163 ANKRD36BQ8N2N9 1353 aa13.69□□□□□ -0.22
NDE1-210ENST00000574163 ABCC6O95255 1503 aa13.69□□□□□ -0.22
NDE1-210ENST00000574163 TTC21BQ7Z4L5 1316 aa13.68□□□□□ -0.22
NDE1-210ENST00000574163 NLRP13Q86W25 1043 aa13.68□□□□□ -0.22
NDE1-210ENST00000574163 USP21Q9UK80 565 aa13.68□□□□□ -0.22
NDE1-210ENST00000574163 TRPC5Q9UL62 973 aaPredicted RBP13.67□□□□□ -0.22
NDE1-210ENST00000574163 NFAT5O94916 1531 aa13.67□□□□□ -0.22
NDE1-210ENST00000574163 USP31Q70CQ4 1352 aa13.67□□□□□ -0.22
NDE1-210ENST00000574163 UNC5CLQ8IV45 518 aa13.66□□□□□ -0.22
NDE1-210ENST00000574163 TMC1Q8TDI8 760 aa13.66□□□□□ -0.22
NDE1-210ENST00000574163 KIAA0232Q92628 1395 aa13.66□□□□□ -0.22
NDE1-210ENST00000574163 GLI3P10071 1580 aa13.66□□□□□ -0.22
NDE1-210ENST00000574163 KIF20BQ96Q89 1820 aa13.65□□□□□ -0.22
NDE1-210ENST00000574163 SOCS7O14512 581 aa13.65□□□□□ -0.22
NDE1-210ENST00000574163 RXRBP28702 533 aa13.65□□□□□ -0.22
NDE1-210ENST00000574163 RBM6P78332 1123 aaKnown RBP13.65□□□□□ -0.22
NDE1-210ENST00000574163 SLC12A5Q9H2X9 1139 aa13.65□□□□□ -0.22
NDE1-210ENST00000574163 OVOS2A0A0J9YW53 1432 aa13.64□□□□□ -0.23
NDE1-210ENST00000574163 RGS12O14924 1447 aa13.64□□□□□ -0.23
NDE1-210ENST00000574163 OVOS2Q6IE36 1432 aa13.64□□□□□ -0.23
NDE1-210ENST00000574163 HSPA5P11021 654 aaKnown RBP13.64□□□□□ -0.23
NDE1-210ENST00000574163 NLRP6P59044 892 aa13.64□□□□□ -0.23
NDE1-210ENST00000574163 QTRT2Q9H974 415 aaKnown RBP13.64□□□□□ -0.23
NDE1-210ENST00000574163 PRDM11Q9NQV5 511 aa13.64□□□□□ -0.23
NDE1-210ENST00000574163 FAM83GA6ND36 823 aa13.63□□□□□ -0.23
NDE1-210ENST00000574163 GCP02774 474 aa13.63□□□□□ -0.23
NDE1-210ENST00000574163 SLC4A2P04920 1241 aa13.63□□□□□ -0.23
NDE1-210ENST00000574163 NUTM2GQ5VZR2 741 aa13.63□□□□□ -0.23
NDE1-210ENST00000574163 COL18A1P39060 1754 aa13.63□□□□□ -0.23
NDE1-210ENST00000574163 PLEKHG5O94827 1062 aa13.62□□□□□ -0.23
NDE1-210ENST00000574163 VPS72Q15906 364 aa13.62□□□□□ -0.23
NDE1-210ENST00000574163 AATKQ6ZMQ8 1374 aa13.61□□□□□ -0.23
NDE1-210ENST00000574163 LTN1O94822 1766 aa13.61□□□□□ -0.23
NDE1-210ENST00000574163 CAMTA1Q9Y6Y1 1673 aa13.61□□□□□ -0.23
NDE1-210ENST00000574163 KCNH5Q8NCM2 988 aa13.61□□□□□ -0.23
NDE1-210ENST00000574163 GJD4Q96KN9 370 aaPredicted RBP13.6□□□□□ -0.23
NDE1-210ENST00000574163 COL5A2P05997 1499 aaPredicted RBP13.6□□□□□ -0.23
NDE1-210ENST00000574163 THSD7AQ9UPZ6 1657 aa13.59□□□□□ -0.23
NDE1-210ENST00000574163 ANKRD26Q9UPS8 1709 aa13.59□□□□□ -0.23
NDE1-210ENST00000574163 ZC3H6P61129 1189 aaKnown RBP13.59□□□□□ -0.23
NDE1-210ENST00000574163 NME9Q86XW9 330 aa13.59□□□□□ -0.23
NDE1-210ENST00000574163 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.59□□□□□ -0.23
NDE1-210ENST00000574163 BTG4Q9NY30 223 aa13.59□□□□□ -0.23
NDE1-210ENST00000574163 WNK3Q9BYP7 1800 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms