RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 POLR3GLQ9BT43 218 aa21.76■■□□□ 1.07
CCNE1-204ENST00000574121 AKAP12Q02952 1782 aa21.76■■□□□ 1.07
CCNE1-204ENST00000574121 SPATA31A6Q5VVP1 1343 aa21.76■■□□□ 1.07
CCNE1-204ENST00000574121 TTC21AQ8NDW8 1320 aa21.76■■□□□ 1.07
CCNE1-204ENST00000574121 CCDC7Q96M83 1385 aa21.75■■□□□ 1.07
CCNE1-204ENST00000574121 EDC4Q6P2E9 1401 aaKnown RBP21.75■■□□□ 1.07
CCNE1-204ENST00000574121 MYOM1P52179 1685 aa21.75■■□□□ 1.07
CCNE1-204ENST00000574121 SHPRHQ149N8 1683 aa21.75■■□□□ 1.07
CCNE1-204ENST00000574121 WASHC2AQ641Q2 1341 aa21.75■■□□□ 1.07
CCNE1-204ENST00000574121 PAK3O75914 559 aaPredicted RBP21.74■■□□□ 1.07
CCNE1-204ENST00000574121 MON2Q7Z3U7 1717 aa21.73■■□□□ 1.07
CCNE1-204ENST00000574121 TTC21BQ7Z4L5 1316 aa21.73■■□□□ 1.07
CCNE1-204ENST00000574121 ALS2Q96Q42 1657 aa21.72■■□□□ 1.07
CCNE1-204ENST00000574121 NRKQ7Z2Y5 1582 aa21.71■■□□□ 1.07
CCNE1-204ENST00000574121 COL22A1Q8NFW1 1626 aaPredicted RBP21.71■■□□□ 1.07
CCNE1-204ENST00000574121 LMOD2Q6P5Q4 547 aa21.71■■□□□ 1.07
CCNE1-204ENST00000574121 ABTB2Q8N961 1025 aa21.7■■□□□ 1.06
CCNE1-204ENST00000574121 MED1Q15648 1581 aaPredicted RBP21.69■■□□□ 1.06
CCNE1-204ENST00000574121 NLRP13Q86W25 1043 aa21.68■■□□□ 1.06
CCNE1-204ENST00000574121 USP31Q70CQ4 1352 aa21.65■■□□□ 1.06
CCNE1-204ENST00000574121 USP19O94966 1318 aa21.65■■□□□ 1.06
CCNE1-204ENST00000574121 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.65■■□□□ 1.06
CCNE1-204ENST00000574121 CARD14Q9BXL6 1004 aa21.65■■□□□ 1.06
CCNE1-204ENST00000574121 PANK3Q9H999 370 aa21.65■■□□□ 1.06
CCNE1-204ENST00000574121 NSD3Q9BZ95 1437 aa21.64■■□□□ 1.06
CCNE1-204ENST00000574121 NLRP6P59044 892 aa21.64■■□□□ 1.05
CCNE1-204ENST00000574121 PIK3C2AO00443 1686 aa21.63■■□□□ 1.05
CCNE1-204ENST00000574121 CGNL1Q0VF96 1302 aa21.62■■□□□ 1.05
CCNE1-204ENST00000574121 HAP1P54257 671 aaPredicted RBP21.61■■□□□ 1.05
CCNE1-204ENST00000574121 NME9Q86XW9 330 aa21.61■■□□□ 1.05
CCNE1-204ENST00000574121 NUTM2BA6NNL0 878 aaPredicted RBP21.6■■□□□ 1.05
CCNE1-204ENST00000574121 NUTM2EB1AL46 878 aaPredicted RBP21.6■■□□□ 1.05
CCNE1-204ENST00000574121 NUTM2GQ5VZR2 741 aa21.6■■□□□ 1.05
CCNE1-204ENST00000574121 NUTM2AQ8IVF1 878 aaPredicted RBP21.6■■□□□ 1.05
CCNE1-204ENST00000574121 LRP6O75581 1613 aa21.59■■□□□ 1.05
CCNE1-204ENST00000574121 OVOS2A0A0J9YW53 1432 aa21.59■■□□□ 1.05
CCNE1-204ENST00000574121 FYB1O15117 783 aa21.59■■□□□ 1.05
CCNE1-204ENST00000574121 OVOS2Q6IE36 1432 aa21.59■■□□□ 1.05
CCNE1-204ENST00000574121 CABLES1Q8TDN4 633 aa21.59■■□□□ 1.05
CCNE1-204ENST00000574121 KNSTRNQ9Y448 316 aa21.59■■□□□ 1.05
CCNE1-204ENST00000574121 USP54Q70EL1 1684 aa21.59■■□□□ 1.05
CCNE1-204ENST00000574121 KCNH5Q8NCM2 988 aa21.58■■□□□ 1.05
CCNE1-204ENST00000574121 SLIT3O75094 1523 aa21.58■■□□□ 1.04
CCNE1-204ENST00000574121 GCP02774 474 aa21.57■■□□□ 1.04
CCNE1-204ENST00000574121 COG3Q96JB2 828 aa21.57■■□□□ 1.04
CCNE1-204ENST00000574121 NSD2O96028 1365 aa21.57■■□□□ 1.04
CCNE1-204ENST00000574121 CRYBG1Q9Y4K1 1723 aa21.57■■□□□ 1.04
CCNE1-204ENST00000574121 ABCA3Q99758 1704 aa21.56■■□□□ 1.04
CCNE1-204ENST00000574121 ZNF316A6NFI3 1004 aaPredicted RBP21.56■■□□□ 1.04
CCNE1-204ENST00000574121 PER1O15534 1290 aaPredicted RBP21.56■■□□□ 1.04
CCNE1-204ENST00000574121 MEX3CQ5U5Q3 659 aaKnown RBP21.55■■□□□ 1.04
CCNE1-204ENST00000574121 PHRF1Q9P1Y6 1649 aaKnown RBP21.55■■□□□ 1.04
CCNE1-204ENST00000574121 CPDO75976 1380 aa21.54■■□□□ 1.04
CCNE1-204ENST00000574121 ADAMTS2O95450 1211 aa21.54■■□□□ 1.04
CCNE1-204ENST00000574121 GGNBP2Q9H3C7 697 aa21.54■■□□□ 1.04
CCNE1-204ENST00000574121 ZRANB1Q9UGI0 708 aa21.54■■□□□ 1.04
CCNE1-204ENST00000574121 NPC1L1Q9UHC9 1359 aa21.52■■□□□ 1.04
CCNE1-204ENST00000574121 PLEKHG5O94827 1062 aa21.52■■□□□ 1.04
CCNE1-204ENST00000574121 MARF1Q9Y4F3 1742 aaKnown RBP21.52■■□□□ 1.03
CCNE1-204ENST00000574121 KIF20BQ96Q89 1820 aa21.51■■□□□ 1.03
CCNE1-204ENST00000574121 AMER1Q5JTC6 1135 aaPredicted RBP21.51■■□□□ 1.03
CCNE1-204ENST00000574121 PRDM11Q9NQV5 511 aa21.5■■□□□ 1.03
CCNE1-204ENST00000574121 KIAA0232Q92628 1395 aa21.49■■□□□ 1.03
CCNE1-204ENST00000574121 C8orf37Q96NL8 207 aa21.49■■□□□ 1.03
CCNE1-204ENST00000574121 NFAT5O94916 1531 aa21.49■■□□□ 1.03
CCNE1-204ENST00000574121 ZC3H6P61129 1189 aaKnown RBP21.48■■□□□ 1.03
CCNE1-204ENST00000574121 FNBP4Q8N3X1 1017 aaPredicted RBP21.48■■□□□ 1.03
CCNE1-204ENST00000574121 NGLY1Q96IV0 654 aa21.48■■□□□ 1.03
CCNE1-204ENST00000574121 ARHGEF25Q86VW2 580 aa21.47■■□□□ 1.03
CCNE1-204ENST00000574121 FAM83GA6ND36 823 aa21.46■■□□□ 1.03
CCNE1-204ENST00000574121 DDX10Q13206 875 aaKnown RBP21.46■■□□□ 1.03
CCNE1-204ENST00000574121 AATKQ6ZMQ8 1374 aa21.46■■□□□ 1.03
CCNE1-204ENST00000574121 SLIT2O94813 1529 aa21.45■■□□□ 1.02
CCNE1-204ENST00000574121 ABCC6O95255 1503 aa21.45■■□□□ 1.02
CCNE1-204ENST00000574121 COL14A1Q05707 1796 aaKnown RBP21.44■■□□□ 1.02
CCNE1-204ENST00000574121 SOX12O15370 315 aa21.44■■□□□ 1.02
CCNE1-204ENST00000574121 PHF23Q9BUL5 403 aaPredicted RBP21.44■■□□□ 1.02
CCNE1-204ENST00000574121 ANKRD26Q9UPS8 1709 aa21.43■■□□□ 1.02
CCNE1-204ENST00000574121 ZNF772Q68DY9 489 aaPredicted RBP21.43■■□□□ 1.02
CCNE1-204ENST00000574121 MORC1Q86VD1 984 aa21.43■■□□□ 1.02
CCNE1-204ENST00000574121 AFF2P51816 1311 aa21.43■■□□□ 1.02
CCNE1-204ENST00000574121 KIF24Q5T7B8 1368 aa21.42■■□□□ 1.02
CCNE1-204ENST00000574121 CHRNA2Q15822 529 aa21.41■■□□□ 1.02
CCNE1-204ENST00000574121 BCL9LQ86UU0 1499 aa21.4■■□□□ 1.02
CCNE1-204ENST00000574121 MAP3K19Q56UN5 1328 aa21.4■■□□□ 1.02
CCNE1-204ENST00000574121 USP21Q9UK80 565 aa21.4■■□□□ 1.02
CCNE1-204ENST00000574121 NWD2Q9ULI1 1742 aa21.4■■□□□ 1.02
CCNE1-204ENST00000574121 RTL1A6NKG5 1358 aa21.39■■□□□ 1.02
CCNE1-204ENST00000574121 CC2D1BQ5T0F9 858 aaKnown RBP21.39■■□□□ 1.01
CCNE1-204ENST00000574121 UNC5CLQ8IV45 518 aa21.39■■□□□ 1.01
CCNE1-204ENST00000574121 BTG4Q9NY30 223 aa21.39■■□□□ 1.01
CCNE1-204ENST00000574121 LMO7Q8WWI1 1683 aa21.39■■□□□ 1.01
CCNE1-204ENST00000574121 PLCH1Q4KWH8 1693 aa21.37■■□□□ 1.01
CCNE1-204ENST00000574121 ZBTB7CA1YPR0 619 aa21.37■■□□□ 1.01
CCNE1-204ENST00000574121 IP6K1Q92551 441 aa21.37■■□□□ 1.01
CCNE1-204ENST00000574121 BLMP54132 1417 aaPredicted RBP21.37■■□□□ 1.01
CCNE1-204ENST00000574121 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.36■■□□□ 1.01
CCNE1-204ENST00000574121 RRS1Q15050 365 aaKnown RBP21.36■■□□□ 1.01
CCNE1-204ENST00000574121 RGS17Q9UGC6 210 aaPredicted RBP21.36■■□□□ 1.01
CCNE1-204ENST00000574121 CAMTA1Q9Y6Y1 1673 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms