RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 KRT28Q7Z3Y7 464 aa14.42□□□□□ -0.1
RPA1-206ENST00000573994 NGLY1Q96IV0 654 aa14.42□□□□□ -0.1
RPA1-206ENST00000573994 EIF3AQ14152 1382 aaKnown RBP14.42□□□□□ -0.1
RPA1-206ENST00000573994 WASLO00401 505 aaPredicted RBP14.41□□□□□ -0.1
RPA1-206ENST00000573994 RGPD8O14715 1765 aaPredicted RBP14.41□□□□□ -0.1
RPA1-206ENST00000573994 KIAA1210Q9ULL0 1709 aa14.41□□□□□ -0.1
RPA1-206ENST00000573994 RXRBP28702 533 aa14.4□□□□□ -0.1
RPA1-206ENST00000573994 ATP7BP35670 1465 aa14.39□□□□□ -0.11
RPA1-206ENST00000573994 LMOD2Q6P5Q4 547 aa14.39□□□□□ -0.11
RPA1-206ENST00000573994 PSME1Q06323 249 aa14.38□□□□□ -0.11
RPA1-206ENST00000573994 QTRT2Q9H974 415 aaKnown RBP14.38□□□□□ -0.11
RPA1-206ENST00000573994 SBNO1A3KN83 1393 aa14.37□□□□□ -0.11
RPA1-206ENST00000573994 TRIM26Q12899 539 aaPredicted RBP14.37□□□□□ -0.11
RPA1-206ENST00000573994 CABLES1Q8TDN4 633 aa14.37□□□□□ -0.11
RPA1-206ENST00000573994 USP21Q9UK80 565 aa14.37□□□□□ -0.11
RPA1-206ENST00000573994 RGS12O14924 1447 aa14.37□□□□□ -0.11
RPA1-206ENST00000573994 CENPJQ9HC77 1338 aaPredicted RBP14.36□□□□□ -0.11
RPA1-206ENST00000573994 ARHGEF10O15013 1369 aa14.35□□□□□ -0.11
RPA1-206ENST00000573994 HAP1P54257 671 aaPredicted RBP14.35□□□□□ -0.11
RPA1-206ENST00000573994 FNBP4Q8N3X1 1017 aaPredicted RBP14.35□□□□□ -0.11
RPA1-206ENST00000573994 NGDNQ8NEJ9 315 aaKnown RBP14.35□□□□□ -0.11
RPA1-206ENST00000573994 NUDT16Q96DE0 195 aaKnown RBP14.35□□□□□ -0.11
RPA1-206ENST00000573994 CDK19Q9BWU1 502 aa14.35□□□□□ -0.11
RPA1-206ENST00000573994 CDK12Q9NYV4 1490 aaPredicted RBP14.35□□□□□ -0.11
RPA1-206ENST00000573994 GPRASP1Q5JY77 1395 aa14.34□□□□□ -0.11
RPA1-206ENST00000573994 TRPM1Q7Z4N2 1603 aa14.34□□□□□ -0.11
RPA1-206ENST00000573994 ATRNO75882 1429 aa14.34□□□□□ -0.11
RPA1-206ENST00000573994 PRR29P0C7W0 189 aa14.34□□□□□ -0.11
RPA1-206ENST00000573994 RBM6P78332 1123 aaKnown RBP14.34□□□□□ -0.11
RPA1-206ENST00000573994 TRPM3Q9HCF6 1732 aaPredicted RBP14.34□□□□□ -0.11
RPA1-206ENST00000573994 ROCK2O75116 1388 aaKnown RBP14.34□□□□□ -0.11
RPA1-206ENST00000573994 BCL9LQ86UU0 1499 aa14.33□□□□□ -0.12
RPA1-206ENST00000573994 HAX1O00165 279 aa14.33□□□□□ -0.12
RPA1-206ENST00000573994 PRKAR2AP13861 404 aaKnown RBP14.33□□□□□ -0.12
RPA1-206ENST00000573994 ABCA3Q99758 1704 aa14.32□□□□□ -0.12
RPA1-206ENST00000573994 PAK3O75914 559 aaPredicted RBP14.32□□□□□ -0.12
RPA1-206ENST00000573994 TRPC5Q9UL62 973 aaPredicted RBP14.32□□□□□ -0.12
RPA1-206ENST00000573994 TOPAZ1Q8N9V7 1692 aa14.32□□□□□ -0.12
RPA1-206ENST00000573994 QRICH2Q9H0J4 1663 aa14.31□□□□□ -0.12
RPA1-206ENST00000573994 SRPK2P78362 688 aaKnown RBP14.31□□□□□ -0.12
RPA1-206ENST00000573994 NBPF8Q3BBV2 869 aa14.31□□□□□ -0.12
RPA1-206ENST00000573994 ITSN1Q15811 1721 aa14.31□□□□□ -0.12
RPA1-206ENST00000573994 MARF1Q9Y4F3 1742 aaKnown RBP14.31□□□□□ -0.12
RPA1-206ENST00000573994 SLIT2O94813 1529 aa14.31□□□□□ -0.12
RPA1-206ENST00000573994 ALS2Q96Q42 1657 aa14.3□□□□□ -0.12
RPA1-206ENST00000573994 CABP2Q9NPB3 220 aa14.3□□□□□ -0.12
RPA1-206ENST00000573994 TONSLQ96HA7 1378 aa14.3□□□□□ -0.12
RPA1-206ENST00000573994 SPDYE4A6NLX3 237 aa14.28□□□□□ -0.12
RPA1-206ENST00000573994 POLR3AO14802 1390 aaPredicted RBP14.28□□□□□ -0.12
RPA1-206ENST00000573994 ACEP12821 1306 aa14.28□□□□□ -0.12
RPA1-206ENST00000573994 PPIP5K1Q6PFW1 1433 aa14.28□□□□□ -0.12
RPA1-206ENST00000573994 UNC5CLQ8IV45 518 aa14.28□□□□□ -0.12
RPA1-206ENST00000573994 CCDC61Q9Y6R9 512 aa14.28□□□□□ -0.12
RPA1-206ENST00000573994 RALGAPBQ86X10 1494 aa14.27□□□□□ -0.12
RPA1-206ENST00000573994 NUTM2GQ5VZR2 741 aa14.27□□□□□ -0.13
RPA1-206ENST00000573994 PLCH1Q4KWH8 1693 aa14.26□□□□□ -0.13
RPA1-206ENST00000573994 SP7Q8TDD2 431 aaPredicted RBP14.26□□□□□ -0.13
RPA1-206ENST00000573994 UPF1Q92900 1129 aaKnown RBP eCLIP14.26□□□□□ -0.131e-10■□□□□ 9.2
RPA1-206ENST00000573994 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.26□□□□□ -0.13
RPA1-206ENST00000573994 PLEKHG3A1L390 1219 aa14.25□□□□□ -0.13
RPA1-206ENST00000573994 FAM83GA6ND36 823 aa14.25□□□□□ -0.13
RPA1-206ENST00000573994 GJD4Q96KN9 370 aaPredicted RBP14.25□□□□□ -0.13
RPA1-206ENST00000573994 GLI3P10071 1580 aa14.25□□□□□ -0.13
RPA1-206ENST00000573994 CRYBG1Q9Y4K1 1723 aa14.24□□□□□ -0.13
RPA1-206ENST00000573994 EVC2Q86UK5 1308 aa14.23□□□□□ -0.13
RPA1-206ENST00000573994 CARD11Q9BXL7 1154 aa14.23□□□□□ -0.13
RPA1-206ENST00000573994 CCDC9Q9Y3X0 531 aaKnown RBP14.23□□□□□ -0.13
RPA1-206ENST00000573994 ATAD2Q6PL18 1390 aa14.22□□□□□ -0.13
RPA1-206ENST00000573994 PRDM11Q9NQV5 511 aa14.22□□□□□ -0.13
RPA1-206ENST00000573994 CABP1Q9NZU7 370 aa14.22□□□□□ -0.13
RPA1-206ENST00000573994 PHRF1Q9P1Y6 1649 aaKnown RBP14.22□□□□□ -0.13
RPA1-206ENST00000573994 KIAA0232Q92628 1395 aa14.22□□□□□ -0.13
RPA1-206ENST00000573994 NWD2Q9ULI1 1742 aa14.21□□□□□ -0.13
RPA1-206ENST00000573994 VPS72Q15906 364 aa14.21□□□□□ -0.13
RPA1-206ENST00000573994 BTG4Q9NY30 223 aa14.21□□□□□ -0.13
RPA1-206ENST00000573994 EP400Q96L91 3159 aa14.21□□□□□ -0.14
RPA1-206ENST00000573994 NRAPQ86VF7 1730 aa14.21□□□□□ -0.14
RPA1-206ENST00000573994 COL14A1Q05707 1796 aaKnown RBP14.2□□□□□ -0.14
RPA1-206ENST00000573994 CHRNA2Q15822 529 aa14.2□□□□□ -0.14
RPA1-206ENST00000573994 USP6P35125 1406 aa14.2□□□□□ -0.14
RPA1-206ENST00000573994 NRKQ7Z2Y5 1582 aa14.2□□□□□ -0.14
RPA1-206ENST00000573994 ZC3H6P61129 1189 aaKnown RBP14.19□□□□□ -0.14
RPA1-206ENST00000573994 ABTB2Q8N961 1025 aa14.19□□□□□ -0.14
RPA1-206ENST00000573994 USP19O94966 1318 aa14.17□□□□□ -0.14
RPA1-206ENST00000573994 A0A0G2JS52 829 aa14.17□□□□□ -0.14
RPA1-206ENST00000573994 MYT1Q01538 1121 aa14.17□□□□□ -0.14
RPA1-206ENST00000573994 SEPT12Q8IYM1 358 aa14.17□□□□□ -0.14
RPA1-206ENST00000573994 SBNO2Q9Y2G9 1366 aa14.17□□□□□ -0.14
RPA1-206ENST00000573994 FAM98CQ17RN3 349 aaKnown RBP14.16□□□□□ -0.14
RPA1-206ENST00000573994 PCGF6Q9BYE7 350 aa14.16□□□□□ -0.14
RPA1-206ENST00000573994 STRN4Q9NRL3 753 aa14.15□□□□□ -0.14
RPA1-206ENST00000573994 SSH2Q76I76 1423 aa14.15□□□□□ -0.14
RPA1-206ENST00000573994 BRD4O60885 1362 aaPredicted RBP14.14□□□□□ -0.15
RPA1-206ENST00000573994 ZBTB7CA1YPR0 619 aa14.14□□□□□ -0.15
RPA1-206ENST00000573994 PIK3C2AO00443 1686 aa14.14□□□□□ -0.15
RPA1-206ENST00000573994 NLRP6P59044 892 aa14.13□□□□□ -0.15
RPA1-206ENST00000573994 NLRP13Q86W25 1043 aa14.13□□□□□ -0.15
RPA1-206ENST00000573994 SPATA31A5Q5VU36 1347 aa14.13□□□□□ -0.15
RPA1-206ENST00000573994 SPATA31A7Q8IWB4 1347 aa14.13□□□□□ -0.15
RPA1-206ENST00000573994 CPDO75976 1380 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms