RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 MFAP1P55081 439 aaKnown RBP19.8■□□□□ 0.76
NUP88-207ENST00000573584 ARHGEF28Q8N1W1 1705 aaKnown RBP19.8■□□□□ 0.76
NUP88-207ENST00000573584 RIPK4P57078 832 aa19.78■□□□□ 0.76
NUP88-207ENST00000573584 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.78■□□□□ 0.76
NUP88-207ENST00000573584 FYB1O15117 783 aa19.78■□□□□ 0.76
NUP88-207ENST00000573584 IDI1Q13907 227 aa19.78■□□□□ 0.76
NUP88-207ENST00000573584 NEXMIFQ5QGS0 1516 aa19.77■□□□□ 0.76
NUP88-207ENST00000573584 IL16Q14005 1332 aa19.77■□□□□ 0.76
NUP88-207ENST00000573584 TERF2IPQ9NYB0 399 aa19.77■□□□□ 0.76
NUP88-207ENST00000573584 TMEM57Q8N5G2 664 aa19.76■□□□□ 0.75
NUP88-207ENST00000573584 SMC5Q8IY18 1101 aa19.76■□□□□ 0.75
NUP88-207ENST00000573584 CAMSAP1Q5T5Y3 1602 aa19.76■□□□□ 0.75
NUP88-207ENST00000573584 FAM43AQ8N2R8 423 aa19.75■□□□□ 0.75
NUP88-207ENST00000573584 ZBTB40Q9NUA8 1239 aa19.75■□□□□ 0.75
NUP88-207ENST00000573584 IPO8O15397 1037 aaKnown RBP19.75■□□□□ 0.75
NUP88-207ENST00000573584 L1TD1Q5T7N2 865 aaKnown RBP19.75■□□□□ 0.75
NUP88-207ENST00000573584 COL3A1P02461 1466 aaPredicted RBP19.74■□□□□ 0.75
NUP88-207ENST00000573584 MINK1Q8N4C8 1332 aaPredicted RBP19.74■□□□□ 0.75
NUP88-207ENST00000573584 DIAPH1O60610 1272 aaKnown RBP19.74■□□□□ 0.75
NUP88-207ENST00000573584 RAPGEF3O95398 923 aa19.74■□□□□ 0.75
NUP88-207ENST00000573584 SIGLEC1Q9BZZ2 1709 aa19.74■□□□□ 0.75
NUP88-207ENST00000573584 ATAD2Q6PL18 1390 aa19.73■□□□□ 0.75
NUP88-207ENST00000573584 PNNQ9H307 717 aaKnown RBP19.73■□□□□ 0.75
NUP88-207ENST00000573584 PIK3C2BO00750 1634 aa19.73■□□□□ 0.75
NUP88-207ENST00000573584 KIF16BQ96L93 1317 aa19.73■□□□□ 0.75
NUP88-207ENST00000573584 MCM4P33991 863 aa19.72■□□□□ 0.75
NUP88-207ENST00000573584 PRAM1Q96QH2 718 aa19.72■□□□□ 0.75
NUP88-207ENST00000573584 CFAP74Q9C0B2 1584 aa19.72■□□□□ 0.75
NUP88-207ENST00000573584 CHMP5Q9NZZ3 219 aa19.72■□□□□ 0.75
NUP88-207ENST00000573584 SLC52A1Q9NWF4 448 aa19.72■□□□□ 0.75
NUP88-207ENST00000573584 ZFYVE9O95405 1425 aa19.71■□□□□ 0.75
NUP88-207ENST00000573584 HDGFL2Q7Z4V5 671 aaPredicted RBP19.69■□□□□ 0.74
NUP88-207ENST00000573584 ALDH1L2Q3SY69 923 aa19.69■□□□□ 0.74
NUP88-207ENST00000573584 NUCB1Q02818 461 aa19.69■□□□□ 0.74
NUP88-207ENST00000573584 HSCBQ8IWL3 235 aa19.69■□□□□ 0.74
NUP88-207ENST00000573584 MED14O60244 1454 aa19.68■□□□□ 0.74
NUP88-207ENST00000573584 LNPKQ9C0E8 428 aa19.68■□□□□ 0.74
NUP88-207ENST00000573584 PNPLA6Q8IY17 1366 aa19.68■□□□□ 0.74
NUP88-207ENST00000573584 ARHGAP31Q2M1Z3 1444 aa19.68■□□□□ 0.74
NUP88-207ENST00000573584 CD163L1Q9NR16 1453 aa19.67■□□□□ 0.74
NUP88-207ENST00000573584 FCHSD2O94868 740 aa19.67■□□□□ 0.74
NUP88-207ENST00000573584 PTPRMP28827 1452 aa19.67■□□□□ 0.74
NUP88-207ENST00000573584 ARXQ96QS3 562 aa19.66■□□□□ 0.74
NUP88-207ENST00000573584 GZF1Q9H116 711 aaPredicted RBP19.66■□□□□ 0.74
NUP88-207ENST00000573584 CABP1Q9NZU7 370 aa19.66■□□□□ 0.74
NUP88-207ENST00000573584 GOLGA6L3A6NEY3 463 aa19.66■□□□□ 0.74
NUP88-207ENST00000573584 CDK19Q9BWU1 502 aa19.65■□□□□ 0.74
NUP88-207ENST00000573584 CHD1LQ86WJ1 897 aa19.65■□□□□ 0.74
NUP88-207ENST00000573584 PRKAR2BP31323 418 aa19.64■□□□□ 0.73
NUP88-207ENST00000573584 YTHDC2Q9H6S0 1430 aaKnown RBP19.64■□□□□ 0.73
NUP88-207ENST00000573584 TRAK2O60296 914 aa19.64■□□□□ 0.73
NUP88-207ENST00000573584 RBM25P49756 843 aaKnown RBP19.64■□□□□ 0.73
NUP88-207ENST00000573584 XRCC6P12956 609 aaKnown RBP eCLIP19.63■□□□□ 0.73
NUP88-207ENST00000573584 ZNF428Q96B54 188 aa19.63■□□□□ 0.73
NUP88-207ENST00000573584 RSPH6AQ9H0K4 717 aa19.62■□□□□ 0.73
NUP88-207ENST00000573584 FSD2A1L4K1 749 aa19.62■□□□□ 0.73
NUP88-207ENST00000573584 FBLN1P23142 703 aa19.62■□□□□ 0.73
NUP88-207ENST00000573584 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.62■□□□□ 0.73
NUP88-207ENST00000573584 BRPF1P55201 1214 aaPredicted RBP19.62■□□□□ 0.73
NUP88-207ENST00000573584 ZNF692Q9BU19 519 aaPredicted RBP19.61■□□□□ 0.73
NUP88-207ENST00000573584 ANKRD26Q9UPS8 1709 aa19.61■□□□□ 0.73
NUP88-207ENST00000573584 ZBTB7BO15156 539 aaPredicted RBP19.6■□□□□ 0.73
NUP88-207ENST00000573584 ANKRD45Q5TZF3 282 aa19.6■□□□□ 0.73
NUP88-207ENST00000573584 SNX21Q969T3 373 aa19.6■□□□□ 0.73
NUP88-207ENST00000573584 POLKQ9UBT6 870 aa19.6■□□□□ 0.73
NUP88-207ENST00000573584 DIP2CQ9Y2E4 1556 aa19.6■□□□□ 0.73
NUP88-207ENST00000573584 NEO1Q92859 1461 aa19.6■□□□□ 0.73
NUP88-207ENST00000573584 BMP2KLQ5H9B9 411 aa19.6■□□□□ 0.73
NUP88-207ENST00000573584 PHACTR3Q96KR7 559 aa19.59■□□□□ 0.73
NUP88-207ENST00000573584 EIF5BO60841 1220 aaKnown RBP19.59■□□□□ 0.73
NUP88-207ENST00000573584 VAMP4O75379 141 aa19.59■□□□□ 0.73
NUP88-207ENST00000573584 CHMP4BQ9H444 224 aaKnown RBP19.59■□□□□ 0.73
NUP88-207ENST00000573584 HMOX1P09601 288 aa19.58■□□□□ 0.73
NUP88-207ENST00000573584 THUMPD2Q9BTF0 503 aaKnown RBP19.58■□□□□ 0.73
NUP88-207ENST00000573584 LRRC7Q96NW7 1537 aa19.58■□□□□ 0.73
NUP88-207ENST00000573584 DDX11L8A8MPP1 907 aa19.58■□□□□ 0.73
NUP88-207ENST00000573584 NFE2L2Q16236 605 aa19.58■□□□□ 0.73
NUP88-207ENST00000573584 GCC1Q96CN9 775 aa19.58■□□□□ 0.73
NUP88-207ENST00000573584 RRAGDQ9NQL2 400 aaPredicted RBP19.58■□□□□ 0.73
NUP88-207ENST00000573584 MRPL50Q8N5N7 158 aaKnown RBP19.58■□□□□ 0.72
NUP88-207ENST00000573584 C1orf115Q9H7X2 142 aa19.58■□□□□ 0.72
NUP88-207ENST00000573584 FAM135BQ49AJ0 1406 aa19.57■□□□□ 0.72
NUP88-207ENST00000573584 DDIT3P35638 169 aa19.57■□□□□ 0.72
NUP88-207ENST00000573584 ARHGAP45Q92619 1136 aa19.57■□□□□ 0.72
NUP88-207ENST00000573584 CALD1Q05682 793 aaKnown RBP19.57■□□□□ 0.72
NUP88-207ENST00000573584 PPIP5K1Q6PFW1 1433 aa19.57■□□□□ 0.72
NUP88-207ENST00000573584 NCOA3Q9Y6Q9 1424 aa19.57■□□□□ 0.72
NUP88-207ENST00000573584 ARHGEF40Q8TER5 1519 aa19.57■□□□□ 0.72
NUP88-207ENST00000573584 CLTCQ00610 1675 aaKnown RBP19.57■□□□□ 0.72
NUP88-207ENST00000573584 TMEM131LA2VDJ0 1609 aa19.56■□□□□ 0.72
NUP88-207ENST00000573584 TSPYL6Q8N831 410 aa19.56■□□□□ 0.72
NUP88-207ENST00000573584 FBXO31Q5XUX0 539 aaPredicted RBP19.56■□□□□ 0.72
NUP88-207ENST00000573584 ELL2O00472 640 aaPredicted RBP19.55■□□□□ 0.72
NUP88-207ENST00000573584 HSP90AB1P08238 724 aaKnown RBP19.55■□□□□ 0.72
NUP88-207ENST00000573584 PANK2Q9BZ23 570 aa19.55■□□□□ 0.72
NUP88-207ENST00000573584 MYO5BQ9ULV0 1848 aa19.55■□□□□ 0.72
NUP88-207ENST00000573584 STAG3Q9UJ98 1225 aa19.55■□□□□ 0.72
NUP88-207ENST00000573584 GNAI1P63096 354 aa19.55■□□□□ 0.72
NUP88-207ENST00000573584 CDC42BPGQ6DT37 1551 aa19.54■□□□□ 0.72
NUP88-207ENST00000573584 YEATS2Q9ULM3 1422 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms