RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 ALS2Q96Q42 1657 aa24.02■■□□□ 1.44
LITAF-212ENST00000573332 C11orf95C9JLR9 678 aaPredicted RBP24■■□□□ 1.43
LITAF-212ENST00000573332 LMOD2Q6P5Q4 547 aa24■■□□□ 1.43
LITAF-212ENST00000573332 A0A1W2PP64 1363 aa24■■□□□ 1.43
LITAF-212ENST00000573332 LRP6O75581 1613 aa23.99■■□□□ 1.43
LITAF-212ENST00000573332 TTC21BQ7Z4L5 1316 aa23.99■■□□□ 1.43
LITAF-212ENST00000573332 TTC21AQ8NDW8 1320 aa23.99■■□□□ 1.43
LITAF-212ENST00000573332 ANKRD36BQ8N2N9 1353 aa23.99■■□□□ 1.43
LITAF-212ENST00000573332 MED1Q15648 1581 aaPredicted RBP23.99■■□□□ 1.43
LITAF-212ENST00000573332 AKAP12Q02952 1782 aa23.98■■□□□ 1.43
LITAF-212ENST00000573332 NUTM2BA6NNL0 878 aaPredicted RBP23.97■■□□□ 1.43
LITAF-212ENST00000573332 NUTM2EB1AL46 878 aaPredicted RBP23.97■■□□□ 1.43
LITAF-212ENST00000573332 NUTM2AQ8IVF1 878 aaPredicted RBP23.97■■□□□ 1.43
LITAF-212ENST00000573332 ABTB2Q8N961 1025 aa23.97■■□□□ 1.43
LITAF-212ENST00000573332 EDC4Q6P2E9 1401 aaKnown RBP23.96■■□□□ 1.43
LITAF-212ENST00000573332 NLRP13Q86W25 1043 aa23.95■■□□□ 1.42
LITAF-212ENST00000573332 MON2Q7Z3U7 1717 aa23.95■■□□□ 1.42
LITAF-212ENST00000573332 NRKQ7Z2Y5 1582 aa23.94■■□□□ 1.42
LITAF-212ENST00000573332 KIF7Q2M1P5 1343 aa23.93■■□□□ 1.42
LITAF-212ENST00000573332 CABLES1Q8TDN4 633 aa23.93■■□□□ 1.42
LITAF-212ENST00000573332 USP19O94966 1318 aa23.92■■□□□ 1.42
LITAF-212ENST00000573332 MYOM1P52179 1685 aa23.92■■□□□ 1.42
LITAF-212ENST00000573332 POLR3GLQ9BT43 218 aa23.91■■□□□ 1.42
LITAF-212ENST00000573332 NLRP6P59044 892 aa23.9■■□□□ 1.42
LITAF-212ENST00000573332 MEX3CQ5U5Q3 659 aaKnown RBP23.9■■□□□ 1.42
LITAF-212ENST00000573332 NUTM2GQ5VZR2 741 aa23.9■■□□□ 1.42
LITAF-212ENST00000573332 USP31Q70CQ4 1352 aa23.9■■□□□ 1.42
LITAF-212ENST00000573332 ADAMTS2O95450 1211 aa23.89■■□□□ 1.41
LITAF-212ENST00000573332 HAP1P54257 671 aaPredicted RBP23.89■■□□□ 1.41
LITAF-212ENST00000573332 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.89■■□□□ 1.41
LITAF-212ENST00000573332 CCDC7Q96M83 1385 aa23.88■■□□□ 1.41
LITAF-212ENST00000573332 CARD14Q9BXL6 1004 aa23.87■■□□□ 1.41
LITAF-212ENST00000573332 CRYBG1Q9Y4K1 1723 aa23.87■■□□□ 1.41
LITAF-212ENST00000573332 WASHC2AQ641Q2 1341 aa23.86■■□□□ 1.41
LITAF-212ENST00000573332 PIK3C2AO00443 1686 aa23.86■■□□□ 1.41
LITAF-212ENST00000573332 NME9Q86XW9 330 aa23.86■■□□□ 1.41
LITAF-212ENST00000573332 ABCA3Q99758 1704 aa23.85■■□□□ 1.41
LITAF-212ENST00000573332 GCP02774 474 aa23.85■■□□□ 1.41
LITAF-212ENST00000573332 FNBP4Q8N3X1 1017 aaPredicted RBP23.85■■□□□ 1.41
LITAF-212ENST00000573332 PLEKHG5O94827 1062 aa23.84■■□□□ 1.41
LITAF-212ENST00000573332 C8orf37Q96NL8 207 aa23.84■■□□□ 1.41
LITAF-212ENST00000573332 PHF23Q9BUL5 403 aaPredicted RBP23.84■■□□□ 1.41
LITAF-212ENST00000573332 SLIT3O75094 1523 aa23.84■■□□□ 1.41
LITAF-212ENST00000573332 NGLY1Q96IV0 654 aa23.83■■□□□ 1.41
LITAF-212ENST00000573332 PANK3Q9H999 370 aa23.83■■□□□ 1.41
LITAF-212ENST00000573332 RGS17Q9UGC6 210 aaPredicted RBP23.83■■□□□ 1.41
LITAF-212ENST00000573332 KCNH5Q8NCM2 988 aa23.82■■□□□ 1.4
LITAF-212ENST00000573332 PHRF1Q9P1Y6 1649 aaKnown RBP23.81■■□□□ 1.4
LITAF-212ENST00000573332 CPDO75976 1380 aa23.81■■□□□ 1.4
LITAF-212ENST00000573332 USP54Q70EL1 1684 aa23.81■■□□□ 1.4
LITAF-212ENST00000573332 FYB1O15117 783 aa23.81■■□□□ 1.4
LITAF-212ENST00000573332 ZRANB1Q9UGI0 708 aa23.81■■□□□ 1.4
LITAF-212ENST00000573332 OVOS2A0A0J9YW53 1432 aa23.81■■□□□ 1.4
LITAF-212ENST00000573332 OVOS2Q6IE36 1432 aa23.81■■□□□ 1.4
LITAF-212ENST00000573332 NSD3Q9BZ95 1437 aa23.81■■□□□ 1.4
LITAF-212ENST00000573332 AFF2P51816 1311 aa23.81■■□□□ 1.4
LITAF-212ENST00000573332 ZNF772Q68DY9 489 aaPredicted RBP23.8■■□□□ 1.4
LITAF-212ENST00000573332 FAM83GA6ND36 823 aa23.79■■□□□ 1.4
LITAF-212ENST00000573332 SLIT2O94813 1529 aa23.79■■□□□ 1.4
LITAF-212ENST00000573332 MARF1Q9Y4F3 1742 aaKnown RBP23.79■■□□□ 1.4
LITAF-212ENST00000573332 KIAA0232Q92628 1395 aa23.78■■□□□ 1.4
LITAF-212ENST00000573332 ZC3H6P61129 1189 aaKnown RBP23.77■■□□□ 1.4
LITAF-212ENST00000573332 COG3Q96JB2 828 aa23.77■■□□□ 1.4
LITAF-212ENST00000573332 PRDM11Q9NQV5 511 aa23.77■■□□□ 1.4
LITAF-212ENST00000573332 CGNL1Q0VF96 1302 aa23.77■■□□□ 1.4
LITAF-212ENST00000573332 USP21Q9UK80 565 aa23.75■■□□□ 1.39
LITAF-212ENST00000573332 BCL9LQ86UU0 1499 aa23.75■■□□□ 1.39
LITAF-212ENST00000573332 ARHGEF25Q86VW2 580 aa23.74■■□□□ 1.39
LITAF-212ENST00000573332 GGNBP2Q9H3C7 697 aa23.74■■□□□ 1.39
LITAF-212ENST00000573332 PER1O15534 1290 aaPredicted RBP23.73■■□□□ 1.39
LITAF-212ENST00000573332 NFAT5O94916 1531 aa23.73■■□□□ 1.39
LITAF-212ENST00000573332 UNC5CLQ8IV45 518 aa23.72■■□□□ 1.39
LITAF-212ENST00000573332 COL14A1Q05707 1796 aaKnown RBP23.72■■□□□ 1.39
LITAF-212ENST00000573332 AATKQ6ZMQ8 1374 aa23.71■■□□□ 1.39
LITAF-212ENST00000573332 POTEAQ6S8J7 498 aa23.71■■□□□ 1.39
LITAF-212ENST00000573332 KNSTRNQ9Y448 316 aa23.71■■□□□ 1.39
LITAF-212ENST00000573332 CHRNA2Q15822 529 aa23.7■■□□□ 1.38
LITAF-212ENST00000573332 BTG4Q9NY30 223 aa23.7■■□□□ 1.38
LITAF-212ENST00000573332 NSD2O96028 1365 aa23.69■■□□□ 1.38
LITAF-212ENST00000573332 QTRT2Q9H974 415 aaKnown RBP23.69■■□□□ 1.38
LITAF-212ENST00000573332 TRPC5Q9UL62 973 aaPredicted RBP23.69■■□□□ 1.38
LITAF-212ENST00000573332 NWD2Q9ULI1 1742 aa23.68■■□□□ 1.38
LITAF-212ENST00000573332 SOX12O15370 315 aa23.68■■□□□ 1.38
LITAF-212ENST00000573332 ATRNO75882 1429 aa23.67■■□□□ 1.38
LITAF-212ENST00000573332 PLCH1Q4KWH8 1693 aa23.67■■□□□ 1.38
LITAF-212ENST00000573332 KIF20BQ96Q89 1820 aa23.66■■□□□ 1.38
LITAF-212ENST00000573332 AMER1Q5JTC6 1135 aaPredicted RBP23.66■■□□□ 1.38
LITAF-212ENST00000573332 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.66■■□□□ 1.38
LITAF-212ENST00000573332 LMO7Q8WWI1 1683 aa23.66■■□□□ 1.38
LITAF-212ENST00000573332 ABCC6O95255 1503 aa23.65■■□□□ 1.38
LITAF-212ENST00000573332 VPS72Q15906 364 aa23.65■■□□□ 1.38
LITAF-212ENST00000573332 CAMTA1Q9Y6Y1 1673 aa23.64■■□□□ 1.38
LITAF-212ENST00000573332 NPC1L1Q9UHC9 1359 aa23.64■■□□□ 1.37
LITAF-212ENST00000573332 RBM6P78332 1123 aaKnown RBP23.63■■□□□ 1.37
LITAF-212ENST00000573332 RXRBP28702 533 aa23.62■■□□□ 1.37
LITAF-212ENST00000573332 GJD4Q96KN9 370 aaPredicted RBP23.62■■□□□ 1.37
LITAF-212ENST00000573332 AXIN2Q9Y2T1 843 aa23.62■■□□□ 1.37
LITAF-212ENST00000573332 COL18A1P39060 1754 aa23.62■■□□□ 1.37
LITAF-212ENST00000573332 NRAPQ86VF7 1730 aa23.62■■□□□ 1.37
LITAF-212ENST00000573332 MAP3K19Q56UN5 1328 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms