RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 MARF1Q9Y4F3 1742 aaKnown RBP12.99□□□□□ -0.33
NDE1-207ENST00000573203 TNS3Q68CZ2 1445 aa12.98□□□□□ -0.33
NDE1-207ENST00000573203 TONSLQ96HA7 1378 aa12.98□□□□□ -0.33
NDE1-207ENST00000573203 CENPJQ9HC77 1338 aaPredicted RBP12.98□□□□□ -0.33
NDE1-207ENST00000573203 CDK19Q9BWU1 502 aa12.98□□□□□ -0.33
NDE1-207ENST00000573203 QRICH2Q9H0J4 1663 aa12.98□□□□□ -0.33
NDE1-207ENST00000573203 SBNO1A3KN83 1393 aa12.97□□□□□ -0.33
NDE1-207ENST00000573203 ROCK2O75116 1388 aaKnown RBP12.97□□□□□ -0.33
NDE1-207ENST00000573203 GPRASP1Q5JY77 1395 aa12.97□□□□□ -0.33
NDE1-207ENST00000573203 LMOD2Q6P5Q4 547 aa12.97□□□□□ -0.33
NDE1-207ENST00000573203 NUDT16Q96DE0 195 aaKnown RBP12.97□□□□□ -0.33
NDE1-207ENST00000573203 ATP7BP35670 1465 aa12.97□□□□□ -0.33
NDE1-207ENST00000573203 RXRBP28702 533 aa12.96□□□□□ -0.33
NDE1-207ENST00000573203 NGDNQ8NEJ9 315 aaKnown RBP12.96□□□□□ -0.33
NDE1-207ENST00000573203 ARHGEF10O15013 1369 aa12.95□□□□□ -0.34
NDE1-207ENST00000573203 PLEKHG5O94827 1062 aa12.95□□□□□ -0.34
NDE1-207ENST00000573203 HAP1P54257 671 aaPredicted RBP12.95□□□□□ -0.34
NDE1-207ENST00000573203 NBPF8Q3BBV2 869 aa12.95□□□□□ -0.34
NDE1-207ENST00000573203 QTRT2Q9H974 415 aaKnown RBP12.95□□□□□ -0.34
NDE1-207ENST00000573203 TRPM3Q9HCF6 1732 aaPredicted RBP12.95□□□□□ -0.34
NDE1-207ENST00000573203 TOPAZ1Q8N9V7 1692 aa12.94□□□□□ -0.34
NDE1-207ENST00000573203 ZNF692Q9BU19 519 aaPredicted RBP12.94□□□□□ -0.34
NDE1-207ENST00000573203 USP21Q9UK80 565 aa12.94□□□□□ -0.34
NDE1-207ENST00000573203 SSUH2Q9Y2M2 353 aa12.94□□□□□ -0.34
NDE1-207ENST00000573203 PAK3O75914 559 aaPredicted RBP12.93□□□□□ -0.34
NDE1-207ENST00000573203 SRPK2P78362 688 aaKnown RBP12.93□□□□□ -0.34
NDE1-207ENST00000573203 REM2Q8IYK8 340 aaPredicted RBP12.93□□□□□ -0.34
NDE1-207ENST00000573203 CCDC61Q9Y6R9 512 aa12.93□□□□□ -0.34
NDE1-207ENST00000573203 ALS2Q96Q42 1657 aa12.93□□□□□ -0.34
NDE1-207ENST00000573203 FNBP4Q8N3X1 1017 aaPredicted RBP12.92□□□□□ -0.34
NDE1-207ENST00000573203 CABLES1Q8TDN4 633 aa12.92□□□□□ -0.34
NDE1-207ENST00000573203 ABCA3Q99758 1704 aa12.92□□□□□ -0.34
NDE1-207ENST00000573203 RBM6P78332 1123 aaKnown RBP12.91□□□□□ -0.34
NDE1-207ENST00000573203 CABP2Q9NPB3 220 aa12.91□□□□□ -0.34
NDE1-207ENST00000573203 TRPC5Q9UL62 973 aaPredicted RBP12.91□□□□□ -0.34
NDE1-207ENST00000573203 ACEP12821 1306 aa12.9□□□□□ -0.34
NDE1-207ENST00000573203 CARD11Q9BXL7 1154 aa12.9□□□□□ -0.34
NDE1-207ENST00000573203 RALGAPBQ86X10 1494 aa12.9□□□□□ -0.34
NDE1-207ENST00000573203 CDK12Q9NYV4 1490 aaPredicted RBP12.9□□□□□ -0.34
NDE1-207ENST00000573203 EVC2Q86UK5 1308 aa12.89□□□□□ -0.35
NDE1-207ENST00000573203 PPIP5K1Q6PFW1 1433 aa12.89□□□□□ -0.35
NDE1-207ENST00000573203 PLEKHG3A1L390 1219 aa12.89□□□□□ -0.35
NDE1-207ENST00000573203 POLR3AO14802 1390 aaPredicted RBP12.89□□□□□ -0.35
NDE1-207ENST00000573203 ATRNO75882 1429 aa12.88□□□□□ -0.35
NDE1-207ENST00000573203 BCL9LQ86UU0 1499 aa12.88□□□□□ -0.35
NDE1-207ENST00000573203 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.88□□□□□ -0.35
NDE1-207ENST00000573203 PLCH1Q4KWH8 1693 aa12.87□□□□□ -0.35
NDE1-207ENST00000573203 SLIT2O94813 1529 aa12.87□□□□□ -0.35
NDE1-207ENST00000573203 NWD2Q9ULI1 1742 aa12.86□□□□□ -0.35
NDE1-207ENST00000573203 CRYBG1Q9Y4K1 1723 aa12.86□□□□□ -0.35
NDE1-207ENST00000573203 UNC5CLQ8IV45 518 aa12.86□□□□□ -0.35
NDE1-207ENST00000573203 CABP1Q9NZU7 370 aa12.86□□□□□ -0.35
NDE1-207ENST00000573203 RGS12O14924 1447 aa12.86□□□□□ -0.35
NDE1-207ENST00000573203 CHRDL2Q6WN34 429 aa12.85□□□□□ -0.35
NDE1-207ENST00000573203 FAM83GA6ND36 823 aa12.84□□□□□ -0.35
NDE1-207ENST00000573203 NUTM2GQ5VZR2 741 aa12.84□□□□□ -0.35
NDE1-207ENST00000573203 GJD4Q96KN9 370 aaPredicted RBP12.84□□□□□ -0.35
NDE1-207ENST00000573203 PHRF1Q9P1Y6 1649 aaKnown RBP12.84□□□□□ -0.35
NDE1-207ENST00000573203 COL14A1Q05707 1796 aaKnown RBP12.84□□□□□ -0.35
NDE1-207ENST00000573203 SBNO2Q9Y2G9 1366 aa12.83□□□□□ -0.36
NDE1-207ENST00000573203 ABTB2Q8N961 1025 aa12.83□□□□□ -0.36
NDE1-207ENST00000573203 CLSPNQ9HAW4 1339 aa12.83□□□□□ -0.36
NDE1-207ENST00000573203 BRD4O60885 1362 aaPredicted RBP12.82□□□□□ -0.36
NDE1-207ENST00000573203 ATAD2Q6PL18 1390 aa12.82□□□□□ -0.36
NDE1-207ENST00000573203 CCDC9Q9Y3X0 531 aaKnown RBP12.82□□□□□ -0.36
NDE1-207ENST00000573203 USP6P35125 1406 aa12.81□□□□□ -0.36
NDE1-207ENST00000573203 PRDM11Q9NQV5 511 aa12.81□□□□□ -0.36
NDE1-207ENST00000573203 BTG4Q9NY30 223 aa12.81□□□□□ -0.36
NDE1-207ENST00000573203 AKAP12Q02952 1782 aa12.81□□□□□ -0.36
NDE1-207ENST00000573203 GLI3P10071 1580 aa12.81□□□□□ -0.36
NDE1-207ENST00000573203 NRAPQ86VF7 1730 aa12.8□□□□□ -0.36
NDE1-207ENST00000573203 VPS72Q15906 364 aa12.8□□□□□ -0.36
NDE1-207ENST00000573203 NLRP13Q86W25 1043 aa12.8□□□□□ -0.36
NDE1-207ENST00000573203 UPF1Q92900 1129 aaKnown RBP eCLIP12.8□□□□□ -0.36
NDE1-207ENST00000573203 ZC3H6P61129 1189 aaKnown RBP12.79□□□□□ -0.36
NDE1-207ENST00000573203 TIMELESSQ9UNS1 1208 aa12.79□□□□□ -0.36
NDE1-207ENST00000573203 KIAA0232Q92628 1395 aa12.79□□□□□ -0.36
NDE1-207ENST00000573203 NRKQ7Z2Y5 1582 aa12.78□□□□□ -0.36
NDE1-207ENST00000573203 ST20-MTHFSA0A0A6YYL1 179 aa12.78□□□□□ -0.36
NDE1-207ENST00000573203 NLRP6P59044 892 aa12.78□□□□□ -0.36
NDE1-207ENST00000573203 CHRNA2Q15822 529 aa12.78□□□□□ -0.36
NDE1-207ENST00000573203 CCER1Q8TC90 406 aaPredicted RBP12.78□□□□□ -0.36
NDE1-207ENST00000573203 USP19O94966 1318 aa12.78□□□□□ -0.36
NDE1-207ENST00000573203 SPDYE1Q8NFV5 336 aaPredicted RBP12.77□□□□□ -0.37
NDE1-207ENST00000573203 TMC1Q8TDI8 760 aa12.77□□□□□ -0.37
NDE1-207ENST00000573203 KTN1Q86UP2 1357 aaKnown RBP12.77□□□□□ -0.37
NDE1-207ENST00000573203 PIK3C2AO00443 1686 aa12.77□□□□□ -0.37
NDE1-207ENST00000573203 PITPNM1O00562 1244 aa12.76□□□□□ -0.37
NDE1-207ENST00000573203 SLC24A1O60721 1099 aa12.76□□□□□ -0.37
NDE1-207ENST00000573203 GCP02774 474 aa12.76□□□□□ -0.37
NDE1-207ENST00000573203 POTEHQ6S545 545 aa12.76□□□□□ -0.37
NDE1-207ENST00000573203 TTC21BQ7Z4L5 1316 aa12.76□□□□□ -0.37
NDE1-207ENST00000573203 CPSF1Q10570 1443 aaKnown RBP12.76□□□□□ -0.37
NDE1-207ENST00000573203 SSH2Q76I76 1423 aa12.76□□□□□ -0.37
NDE1-207ENST00000573203 MON2Q7Z3U7 1717 aa12.76□□□□□ -0.37
NDE1-207ENST00000573203 BRWD3Q6RI45 1802 aa12.76□□□□□ -0.37
NDE1-207ENST00000573203 A0A0G2JS52 829 aa12.75□□□□□ -0.37
NDE1-207ENST00000573203 SPDYE4A6NLX3 237 aa12.75□□□□□ -0.37
NDE1-207ENST00000573203 MYT1Q01538 1121 aa12.75□□□□□ -0.37
NDE1-207ENST00000573203 TTC21AQ8NDW8 1320 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms