RNA–Protein interactions for RNA: ENST00000572845.1

TVP23B-205, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 483 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-205ENST00000572845 LINC01559Q495D7 138 aa7.83□□□□□ -1.16
TVP23B-205ENST00000572845 PRPF38BQ5VTL8 546 aaKnown RBP7.83□□□□□ -1.16
TVP23B-205ENST00000572845 TRIM46Q7Z4K8 759 aa7.83□□□□□ -1.16
TVP23B-205ENST00000572845 FAM174AQ8TBP5 190 aa7.83□□□□□ -1.16
TVP23B-205ENST00000572845 IRF7Q92985 503 aa7.83□□□□□ -1.16
TVP23B-205ENST00000572845 TBC1D2Q9BYX2 928 aa7.83□□□□□ -1.16
TVP23B-205ENST00000572845 SPTLC1O15269 473 aa7.82□□□□□ -1.16
TVP23B-205ENST00000572845 SCARF1Q14162 830 aa7.82□□□□□ -1.16
TVP23B-205ENST00000572845 RSBN1LQ6PCB5 846 aaPredicted RBP7.82□□□□□ -1.16
TVP23B-205ENST00000572845 ZBTB3Q9H5J0 574 aa7.82□□□□□ -1.16
TVP23B-205ENST00000572845 NNTQ13423 1086 aa7.81□□□□□ -1.16
TVP23B-205ENST00000572845 ADH1CP00326 375 aa7.8□□□□□ -1.16
TVP23B-205ENST00000572845 BMP1P13497 986 aa7.8□□□□□ -1.16
TVP23B-205ENST00000572845 AK7Q96M32 723 aa7.8□□□□□ -1.16
TVP23B-205ENST00000572845 ZFP42Q96MM3 310 aa7.8□□□□□ -1.16
TVP23B-205ENST00000572845 RIC3Q7Z5B4 369 aa7.79□□□□□ -1.16
TVP23B-205ENST00000572845 CDK15Q96Q40 435 aa7.79□□□□□ -1.16
TVP23B-205ENST00000572845 TLL2Q9Y6L7 1015 aa7.79□□□□□ -1.16
TVP23B-205ENST00000572845 TRIM66O15016 1216 aa7.78□□□□□ -1.16
TVP23B-205ENST00000572845 HRCP23327 699 aa7.78□□□□□ -1.16
TVP23B-205ENST00000572845 NR5A1Q13285 461 aa7.78□□□□□ -1.16
TVP23B-205ENST00000572845 MRPL14Q6P1L8 145 aaKnown RBP7.78□□□□□ -1.16
TVP23B-205ENST00000572845 PARP9Q8IXQ6 854 aa7.78□□□□□ -1.16
TVP23B-205ENST00000572845 ARMC2Q8NEN0 867 aa7.78□□□□□ -1.16
TVP23B-205ENST00000572845 PCDHB15Q9Y5E8 787 aa7.78□□□□□ -1.16
TVP23B-205ENST00000572845 H3BM21 787 aa7.77□□□□□ -1.17
TVP23B-205ENST00000572845 WDR4P57081 412 aaKnown RBP7.77□□□□□ -1.17
TVP23B-205ENST00000572845 TUSC1Q2TAM9 212 aa7.77□□□□□ -1.17
TVP23B-205ENST00000572845 BPHLQ86WA6 291 aaPredicted RBP7.77□□□□□ -1.17
TVP23B-205ENST00000572845 CFAP99D6REC4 459 aa7.76□□□□□ -1.17
TVP23B-205ENST00000572845 F12P00748 615 aaPredicted RBP7.76□□□□□ -1.17
TVP23B-205ENST00000572845 TIMP2P16035 220 aa7.76□□□□□ -1.17
TVP23B-205ENST00000572845 AGERQ15109 404 aa7.76□□□□□ -1.17
TVP23B-205ENST00000572845 LCE2CQ5TA81 110 aa7.76□□□□□ -1.17
TVP23B-205ENST00000572845 ARID5BQ14865 1188 aa7.75□□□□□ -1.17
TVP23B-205ENST00000572845 KLF16Q9BXK1 252 aaPredicted RBP7.75□□□□□ -1.17
TVP23B-205ENST00000572845 NUTM2BA6NNL0 878 aaPredicted RBP7.74□□□□□ -1.17
TVP23B-205ENST00000572845 NUTM2EB1AL46 878 aaPredicted RBP7.74□□□□□ -1.17
TVP23B-205ENST00000572845 GMPRP36959 345 aa7.74□□□□□ -1.17
TVP23B-205ENST00000572845 NUTM2DQ5VT03 806 aaPredicted RBP7.74□□□□□ -1.17
TVP23B-205ENST00000572845 NUTM2AQ8IVF1 878 aaPredicted RBP7.74□□□□□ -1.17
TVP23B-205ENST00000572845 ZSCAN1Q8NBB4 408 aa7.74□□□□□ -1.17
TVP23B-205ENST00000572845 UPP2O95045 317 aa7.73□□□□□ -1.17
TVP23B-205ENST00000572845 FOXJ1Q92949 421 aa7.73□□□□□ -1.17
TVP23B-205ENST00000572845 PURBQ96QR8 312 aaKnown RBP7.73□□□□□ -1.17
TVP23B-205ENST00000572845 ZIC2O95409 532 aaPredicted RBP7.72□□□□□ -1.17
TVP23B-205ENST00000572845 NBPF14Q5TI25 921 aa7.72□□□□□ -1.17
TVP23B-205ENST00000572845 HELBQ8NG08 1087 aaPredicted RBP7.72□□□□□ -1.17
TVP23B-205ENST00000572845 MAP10Q9P2G4 905 aa7.72□□□□□ -1.17
TVP23B-205ENST00000572845 RSPH6AQ9H0K4 717 aa7.71□□□□□ -1.18
TVP23B-205ENST00000572845 LILRB3O75022 631 aa7.7□□□□□ -1.18
TVP23B-205ENST00000572845 GRM5P41594 1212 aa7.7□□□□□ -1.18
TVP23B-205ENST00000572845 VEGFBP49765 207 aa7.7□□□□□ -1.18
TVP23B-205ENST00000572845 CSPP1Q1MSJ5 1256 aa7.7□□□□□ -1.18
TVP23B-205ENST00000572845 CABLES1Q8TDN4 633 aa7.7□□□□□ -1.18
TVP23B-205ENST00000572845 TSC1Q92574 1164 aa7.7□□□□□ -1.18
TVP23B-205ENST00000572845 GPKOWQ92917 476 aaPredicted RBP eCLIP7.7□□□□□ -1.18
TVP23B-205ENST00000572845 MAN1A2O60476 641 aa7.69□□□□□ -1.18
TVP23B-205ENST00000572845 PDE4DQ08499 809 aa7.69□□□□□ -1.18
TVP23B-205ENST00000572845 MYSM1Q5VVJ2 828 aa7.69□□□□□ -1.18
TVP23B-205ENST00000572845 MAP4K5Q9Y4K4 846 aa7.69□□□□□ -1.18
TVP23B-205ENST00000572845 PER1O15534 1290 aaPredicted RBP7.68□□□□□ -1.18
TVP23B-205ENST00000572845 VSIG8P0DPA2 414 aa7.68□□□□□ -1.18
TVP23B-205ENST00000572845 ITPKCQ96DU7 683 aa7.68□□□□□ -1.18
TVP23B-205ENST00000572845 C4orf48Q5BLP8 95 aa7.67□□□□□ -1.18
TVP23B-205ENST00000572845 SH3RF1Q7Z6J0 888 aa7.67□□□□□ -1.18
TVP23B-205ENST00000572845 TRMT44Q8IYL2 757 aaKnown RBP7.67□□□□□ -1.18
TVP23B-205ENST00000572845 TSEN34Q9BSV6 310 aaKnown RBP7.67□□□□□ -1.18
TVP23B-205ENST00000572845 C1QTNF2Q9BXJ5 285 aa7.67□□□□□ -1.18
TVP23B-205ENST00000572845 ZFAND3Q9H8U3 227 aa7.67□□□□□ -1.18
TVP23B-205ENST00000572845 LIMD1Q9UGP4 676 aa7.67□□□□□ -1.18
TVP23B-205ENST00000572845 EMILIN1Q9Y6C2 1016 aa7.67□□□□□ -1.18
TVP23B-205ENST00000572845 ERBB4Q15303 1308 aa7.67□□□□□ -1.18
TVP23B-205ENST00000572845 NR3C2P08235 984 aa7.66□□□□□ -1.18
TVP23B-205ENST00000572845 BMP2P12643 396 aa7.66□□□□□ -1.18
TVP23B-205ENST00000572845 VASH1Q7L8A9 365 aaPredicted RBP7.66□□□□□ -1.18
TVP23B-205ENST00000572845 LORP23490 312 aaPredicted RBP7.65□□□□□ -1.18
TVP23B-205ENST00000572845 QPCTQ16769 361 aa7.65□□□□□ -1.18
TVP23B-205ENST00000572845 C6orf118Q5T5N4 469 aa7.65□□□□□ -1.18
TVP23B-205ENST00000572845 LINC00528Q8N1L1 170 aa7.65□□□□□ -1.18
TVP23B-205ENST00000572845 MEIOBQ8N635 442 aa7.65□□□□□ -1.18
TVP23B-205ENST00000572845 CLK2P49760 499 aaKnown RBP7.64□□□□□ -1.19
TVP23B-205ENST00000572845 SH3BP5LQ7L8J4 393 aa7.64□□□□□ -1.19
TVP23B-205ENST00000572845 CDV3Q9UKY7 258 aaKnown RBP7.64□□□□□ -1.19
TVP23B-205ENST00000572845 CCDC116Q8IYX3 515 aa7.63□□□□□ -1.19
TVP23B-205ENST00000572845 MAGEB6P1A0A0J9YX57 407 aa7.62□□□□□ -1.19
TVP23B-205ENST00000572845 SOBPA7XYQ1 873 aa7.62□□□□□ -1.19
TVP23B-205ENST00000572845 PPFIA3O75145 1194 aa7.62□□□□□ -1.19
TVP23B-205ENST00000572845 FSHRP23945 695 aa7.62□□□□□ -1.19
TVP23B-205ENST00000572845 RTL5Q5HYW3 569 aaPredicted RBP7.62□□□□□ -1.19
TVP23B-205ENST00000572845 PDXDC2PQ6P474 469 aa7.62□□□□□ -1.19
TVP23B-205ENST00000572845 PGPEP1Q9NXJ5 209 aa7.62□□□□□ -1.19
TVP23B-205ENST00000572845 SOS2Q07890 1332 aaPredicted RBP7.61□□□□□ -1.19
TVP23B-205ENST00000572845 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.61□□□□□ -1.19
TVP23B-205ENST00000572845 ZC3H4Q9UPT8 1303 aaKnown RBP7.6□□□□□ -1.19
TVP23B-205ENST00000572845 DHX9Q08211 1270 aaKnown RBP7.6□□□□□ -1.19
TVP23B-205ENST00000572845 SLC24A3Q9HC58 644 aa7.6□□□□□ -1.19
TVP23B-205ENST00000572845 TTLL8A6PVC2 850 aa7.58□□□□□ -1.2
TVP23B-205ENST00000572845 ERFEQ4G0M1 354 aa7.58□□□□□ -1.2
TVP23B-205ENST00000572845 ARHGAP9Q9BRR9 750 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms