RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 SALL2Q9Y467 1007 aaPredicted RBP27.3■■□□□ 1.96
CHRNE-202ENST00000572438 TTC21BQ7Z4L5 1316 aa27.3■■□□□ 1.96
CHRNE-202ENST00000572438 PDE3BQ13370 1112 aa27.3■■□□□ 1.96
CHRNE-202ENST00000572438 PMFBP1Q8TBY8 1022 aa27.28■■□□□ 1.96
CHRNE-202ENST00000572438 COG3Q96JB2 828 aa27.28■■□□□ 1.96
CHRNE-202ENST00000572438 RBM33Q96EV2 1170 aaKnown RBP27.27■■□□□ 1.96
CHRNE-202ENST00000572438 SSH2Q76I76 1423 aa27.27■■□□□ 1.96
CHRNE-202ENST00000572438 CCDC146Q8IYE0 955 aa27.27■■□□□ 1.96
CHRNE-202ENST00000572438 ZRANB1Q9UGI0 708 aa27.27■■□□□ 1.96
CHRNE-202ENST00000572438 COL3A1P02461 1466 aaPredicted RBP27.27■■□□□ 1.96
CHRNE-202ENST00000572438 NGDNQ8NEJ9 315 aaKnown RBP27.26■■□□□ 1.95
CHRNE-202ENST00000572438 RGPD8O14715 1765 aaPredicted RBP27.25■■□□□ 1.95
CHRNE-202ENST00000572438 STRCQ7RTU9 1775 aa27.25■■□□□ 1.95
CHRNE-202ENST00000572438 SUPT16HQ9Y5B9 1047 aaKnown RBP27.25■■□□□ 1.95
CHRNE-202ENST00000572438 AATKQ6ZMQ8 1374 aa27.25■■□□□ 1.95
CHRNE-202ENST00000572438 PNPLA6Q8IY17 1366 aa27.25■■□□□ 1.95
CHRNE-202ENST00000572438 NEFLP07196 543 aa27.23■■□□□ 1.95
CHRNE-202ENST00000572438 POLKQ9UBT6 870 aa27.23■■□□□ 1.95
CHRNE-202ENST00000572438 TTC21AQ8NDW8 1320 aa27.23■■□□□ 1.95
CHRNE-202ENST00000572438 C14orf37Q86TY3 774 aa27.22■■□□□ 1.95
CHRNE-202ENST00000572438 PROSER2Q86WR7 435 aaPredicted RBP27.21■■□□□ 1.95
CHRNE-202ENST00000572438 OVOS2A0A0J9YW53 1432 aa27.2■■□□□ 1.95
CHRNE-202ENST00000572438 OVOS2Q6IE36 1432 aa27.2■■□□□ 1.95
CHRNE-202ENST00000572438 APAF1O14727 1248 aa27.2■■□□□ 1.94
CHRNE-202ENST00000572438 NGEFQ8N5V2 710 aa27.2■■□□□ 1.94
CHRNE-202ENST00000572438 FBLN1P23142 703 aa27.18■■□□□ 1.94
CHRNE-202ENST00000572438 U2AF1L5P0DN76 240 aaPredicted RBP27.18■■□□□ 1.94
CHRNE-202ENST00000572438 U2AF1Q01081 240 aaKnown RBP eCLIP27.18■■□□□ 1.94
CHRNE-202ENST00000572438 FKBP8Q14318 412 aa27.18■■□□□ 1.94
CHRNE-202ENST00000572438 RUNDC1Q96C34 613 aa27.18■■□□□ 1.94
CHRNE-202ENST00000572438 ZNF521Q96K83 1311 aa27.17■■□□□ 1.94
CHRNE-202ENST00000572438 DIAPH1O60610 1272 aaKnown RBP27.17■■□□□ 1.94
CHRNE-202ENST00000572438 PHF8Q9UPP1 1060 aa27.17■■□□□ 1.94
CHRNE-202ENST00000572438 CDCA7LQ96GN5 454 aa27.15■■□□□ 1.94
CHRNE-202ENST00000572438 EMILIN1Q9Y6C2 1016 aa27.15■■□□□ 1.94
CHRNE-202ENST00000572438 CDK12Q9NYV4 1490 aaPredicted RBP27.15■■□□□ 1.94
CHRNE-202ENST00000572438 PPM1GO15355 546 aaPredicted RBP27.14■■□□□ 1.94
CHRNE-202ENST00000572438 USP31Q70CQ4 1352 aa27.14■■□□□ 1.93
CHRNE-202ENST00000572438 MAP2P11137 1827 aaKnown RBP27.13■■□□□ 1.93
CHRNE-202ENST00000572438 U2SURPO15042 1029 aaKnown RBP27.13■■□□□ 1.93
CHRNE-202ENST00000572438 IQSEC2Q5JU85 1478 aa27.12■■□□□ 1.93
CHRNE-202ENST00000572438 C19orf44Q9H6X5 657 aa27.11■■□□□ 1.93
CHRNE-202ENST00000572438 NCOA3Q9Y6Q9 1424 aa27.1■■□□□ 1.93
CHRNE-202ENST00000572438 RRS1Q15050 365 aaKnown RBP27.1■■□□□ 1.93
CHRNE-202ENST00000572438 ESCO1Q5FWF5 840 aa27.1■■□□□ 1.93
CHRNE-202ENST00000572438 GOLGA2Q08379 1002 aa27.09■■□□□ 1.93
CHRNE-202ENST00000572438 STRCP1A6NGW2 1772 aa27.09■■□□□ 1.93
CHRNE-202ENST00000572438 TCP11L2Q8N4U5 519 aa27.09■■□□□ 1.93
CHRNE-202ENST00000572438 TMEM94Q12767 1356 aa27.09■■□□□ 1.93
CHRNE-202ENST00000572438 PIK3C2AO00443 1686 aa27.08■■□□□ 1.93
CHRNE-202ENST00000572438 NCBP3Q53F19 620 aaKnown RBP27.06■■□□□ 1.92
CHRNE-202ENST00000572438 PLEKHF1Q96S99 279 aa27.05■■□□□ 1.92
CHRNE-202ENST00000572438 RNF123Q5XPI4 1314 aa27.05■■□□□ 1.92
CHRNE-202ENST00000572438 IL13P35225 146 aa27.04■■□□□ 1.92
CHRNE-202ENST00000572438 PNNQ9H307 717 aaKnown RBP27.04■■□□□ 1.92
CHRNE-202ENST00000572438 DCCP43146 1447 aa27.04■■□□□ 1.92
CHRNE-202ENST00000572438 NLRP6P59044 892 aa27.03■■□□□ 1.92
CHRNE-202ENST00000572438 C1orf167Q5SNV9 1468 aa27.02■■□□□ 1.92
CHRNE-202ENST00000572438 WWC1Q8IX03 1113 aa27.02■■□□□ 1.92
CHRNE-202ENST00000572438 ORAI2Q96SN7 254 aa27.02■■□□□ 1.92
CHRNE-202ENST00000572438 USP54Q70EL1 1684 aa27.02■■□□□ 1.92
CHRNE-202ENST00000572438 PAK3O75914 559 aaPredicted RBP27.02■■□□□ 1.92
CHRNE-202ENST00000572438 FCHSD2O94868 740 aa27.02■■□□□ 1.92
CHRNE-202ENST00000572438 PSME1Q06323 249 aa27.02■■□□□ 1.92
CHRNE-202ENST00000572438 SLFN5Q08AF3 891 aa27.02■■□□□ 1.92
CHRNE-202ENST00000572438 PHF23Q9BUL5 403 aaPredicted RBP27.02■■□□□ 1.92
CHRNE-202ENST00000572438 CCDC27Q2M243 656 aa27.01■■□□□ 1.91
CHRNE-202ENST00000572438 DUSP27Q5VZP5 1158 aa27.01■■□□□ 1.91
CHRNE-202ENST00000572438 ABTB2Q8N961 1025 aa27.01■■□□□ 1.91
CHRNE-202ENST00000572438 RRP7AQ9Y3A4 280 aaKnown RBP27.01■■□□□ 1.91
CHRNE-202ENST00000572438 LRRC7Q96NW7 1537 aa27.01■■□□□ 1.91
CHRNE-202ENST00000572438 RCAN3Q9UKA8 241 aa27■■□□□ 1.91
CHRNE-202ENST00000572438 MAPK8IP3Q9UPT6 1336 aa27■■□□□ 1.91
CHRNE-202ENST00000572438 ATF3P18847 181 aa27■■□□□ 1.91
CHRNE-202ENST00000572438 NEUROD2Q15784 382 aa27■■□□□ 1.91
CHRNE-202ENST00000572438 IRX6P78412 446 aaPredicted RBP26.99■■□□□ 1.91
CHRNE-202ENST00000572438 TRMT2AQ8IZ69 625 aaKnown RBP26.99■■□□□ 1.91
CHRNE-202ENST00000572438 E9PSI1 815 aa26.98■■□□□ 1.91
CHRNE-202ENST00000572438 SOX12O15370 315 aa26.97■■□□□ 1.91
CHRNE-202ENST00000572438 RSPH6AQ9H0K4 717 aa26.97■■□□□ 1.91
CHRNE-202ENST00000572438 DMRT2Q9Y5R5 561 aa26.97■■□□□ 1.91
CHRNE-202ENST00000572438 MST1RQ04912 1400 aa26.97■■□□□ 1.91
CHRNE-202ENST00000572438 MAP3K19Q56UN5 1328 aa26.96■■□□□ 1.91
CHRNE-202ENST00000572438 KIF1AQ12756 1690 aa26.96■■□□□ 1.91
CHRNE-202ENST00000572438 ERICH6BQ5W0A0 696 aa26.96■■□□□ 1.91
CHRNE-202ENST00000572438 PEAK1Q9H792 1746 aa26.96■■□□□ 1.91
CHRNE-202ENST00000572438 MARF1Q9Y4F3 1742 aaKnown RBP26.96■■□□□ 1.91
CHRNE-202ENST00000572438 NUTM2GQ5VZR2 741 aa26.95■■□□□ 1.91
CHRNE-202ENST00000572438 SPINK5Q9NQ38 1064 aaPredicted RBP26.95■■□□□ 1.91
CHRNE-202ENST00000572438 FOXO3O43524 673 aa26.95■■□□□ 1.9
CHRNE-202ENST00000572438 WDR63Q8IWG1 891 aa26.95■■□□□ 1.9
CHRNE-202ENST00000572438 SBNO1A3KN83 1393 aa26.94■■□□□ 1.9
CHRNE-202ENST00000572438 TMPOP42166 694 aaKnown RBP26.94■■□□□ 1.9
CHRNE-202ENST00000572438 CADPS2Q86UW7 1296 aa26.94■■□□□ 1.9
CHRNE-202ENST00000572438 MSH6P52701 1360 aa26.94■■□□□ 1.9
CHRNE-202ENST00000572438 PRKAR2BP31323 418 aa26.93■■□□□ 1.9
CHRNE-202ENST00000572438 EIF4A2Q14240 407 aaKnown RBP26.93■■□□□ 1.9
CHRNE-202ENST00000572438 FLT4P35916 1363 aa26.93■■□□□ 1.9
CHRNE-202ENST00000572438 HMOX1P09601 288 aa26.92■■□□□ 1.9
CHRNE-202ENST00000572438 HSP90AB2PQ58FF8 381 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms