RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 MINK1Q8N4C8 1332 aaPredicted RBP11.09□□□□□ -0.63
SMG6-211ENST00000572369 RGPD8O14715 1765 aaPredicted RBP11.09□□□□□ -0.63
SMG6-211ENST00000572369 ROCK2O75116 1388 aaKnown RBP11.09□□□□□ -0.63
SMG6-211ENST00000572369 ONECUT3O60422 494 aaPredicted RBP11.09□□□□□ -0.63
SMG6-211ENST00000572369 HSPA6P17066 643 aa11.09□□□□□ -0.63
SMG6-211ENST00000572369 HIRIP3Q9BW71 556 aaPredicted RBP11.09□□□□□ -0.63
SMG6-211ENST00000572369 NRKQ7Z2Y5 1582 aa11.08□□□□□ -0.64
SMG6-211ENST00000572369 COL13A1Q5TAT6 717 aaPredicted RBP11.08□□□□□ -0.64
SMG6-211ENST00000572369 CAMKK2Q96RR4 588 aa11.08□□□□□ -0.64
SMG6-211ENST00000572369 ORAI2Q96SN7 254 aa11.08□□□□□ -0.64
SMG6-211ENST00000572369 RREB1Q92766 1687 aa11.08□□□□□ -0.64
SMG6-211ENST00000572369 PARD3Q8TEW0 1356 aa11.07□□□□□ -0.64
SMG6-211ENST00000572369 CLSPNQ9HAW4 1339 aa11.07□□□□□ -0.64
SMG6-211ENST00000572369 NUP188Q5SRE5 1749 aa11.06□□□□□ -0.64
SMG6-211ENST00000572369 QRICH2Q9H0J4 1663 aa11.06□□□□□ -0.64
SMG6-211ENST00000572369 SHANK3Q9BYB0 1731 aa11.06□□□□□ -0.64
SMG6-211ENST00000572369 EIF3AQ14152 1382 aaKnown RBP11.05□□□□□ -0.64
SMG6-211ENST00000572369 KIF1AQ12756 1690 aa11.05□□□□□ -0.64
SMG6-211ENST00000572369 NBPF8Q3BBV2 869 aa11.05□□□□□ -0.64
SMG6-211ENST00000572369 TNS4Q8IZW8 715 aa11.05□□□□□ -0.64
SMG6-211ENST00000572369 CENPJQ9HC77 1338 aaPredicted RBP11.05□□□□□ -0.64
SMG6-211ENST00000572369 MYOM1P52179 1685 aa11.04□□□□□ -0.64
SMG6-211ENST00000572369 WASLO00401 505 aaPredicted RBP11.04□□□□□ -0.64
SMG6-211ENST00000572369 VPS72Q15906 364 aa11.04□□□□□ -0.64
SMG6-211ENST00000572369 NBPF14Q5TI25 921 aa11.04□□□□□ -0.64
SMG6-211ENST00000572369 CARD11Q9BXL7 1154 aa11.04□□□□□ -0.64
SMG6-211ENST00000572369 NPHP3Q7Z494 1330 aa11.04□□□□□ -0.64
SMG6-211ENST00000572369 ITSN1Q15811 1721 aa11.04□□□□□ -0.64
SMG6-211ENST00000572369 A0A0G2JS52 829 aa11.03□□□□□ -0.64
SMG6-211ENST00000572369 FOXO3O43524 673 aa11.03□□□□□ -0.64
SMG6-211ENST00000572369 MYT1Q01538 1121 aa11.03□□□□□ -0.64
SMG6-211ENST00000572369 XPCQ01831 940 aaPredicted RBP11.02□□□□□ -0.65
SMG6-211ENST00000572369 PHF8Q9UPP1 1060 aa11.02□□□□□ -0.65
SMG6-211ENST00000572369 TULP4Q9NRJ4 1543 aa11.02□□□□□ -0.65
SMG6-211ENST00000572369 USP32Q8NFA0 1604 aa11.02□□□□□ -0.65
SMG6-211ENST00000572369 ANKARQ7Z5J8 1434 aa11.01□□□□□ -0.65
SMG6-211ENST00000572369 FAM83GA6ND36 823 aa11.01□□□□□ -0.65
SMG6-211ENST00000572369 SRPK2P78362 688 aaKnown RBP11.01□□□□□ -0.65
SMG6-211ENST00000572369 FAM182BQ5T319 152 aa11.01□□□□□ -0.65
SMG6-211ENST00000572369 PMFBP1Q8TBY8 1022 aa11.01□□□□□ -0.65
SMG6-211ENST00000572369 CDK19Q9BWU1 502 aa11.01□□□□□ -0.65
SMG6-211ENST00000572369 TIMELESSQ9UNS1 1208 aa11.01□□□□□ -0.65
SMG6-211ENST00000572369 CCDC9Q9Y3X0 531 aaKnown RBP11.01□□□□□ -0.65
SMG6-211ENST00000572369 PSME1Q06323 249 aa11□□□□□ -0.65
SMG6-211ENST00000572369 LMOD2Q6P5Q4 547 aa10.99□□□□□ -0.65
SMG6-211ENST00000572369 KRT28Q7Z3Y7 464 aa10.99□□□□□ -0.65
SMG6-211ENST00000572369 NGDNQ8NEJ9 315 aaKnown RBP10.99□□□□□ -0.65
SMG6-211ENST00000572369 NUDT16Q96DE0 195 aaKnown RBP10.99□□□□□ -0.65
SMG6-211ENST00000572369 SYT17Q9BSW7 474 aa10.99□□□□□ -0.65
SMG6-211ENST00000572369 GPRASP1Q5JY77 1395 aa10.99□□□□□ -0.65
SMG6-211ENST00000572369 FHDC1Q9C0D6 1143 aaPredicted RBP10.98□□□□□ -0.65
SMG6-211ENST00000572369 EVC2Q86UK5 1308 aa10.98□□□□□ -0.65
SMG6-211ENST00000572369 PRR36Q9H6K5 1346 aa10.98□□□□□ -0.65
SMG6-211ENST00000572369 PLCH1Q4KWH8 1693 aa10.98□□□□□ -0.65
SMG6-211ENST00000572369 NWD2Q9ULI1 1742 aa10.98□□□□□ -0.65
SMG6-211ENST00000572369 CASZ1Q86V15 1759 aa10.98□□□□□ -0.65
SMG6-211ENST00000572369 PLEKHG5O94827 1062 aa10.97□□□□□ -0.65
SMG6-211ENST00000572369 APBA3O96018 575 aa10.97□□□□□ -0.65
SMG6-211ENST00000572369 CABP2Q9NPB3 220 aa10.97□□□□□ -0.65
SMG6-211ENST00000572369 PXDNQ92626 1479 aa10.97□□□□□ -0.65
SMG6-211ENST00000572369 TOPAZ1Q8N9V7 1692 aa10.96□□□□□ -0.65
SMG6-211ENST00000572369 ATP7BP35670 1465 aa10.96□□□□□ -0.65
SMG6-211ENST00000572369 PAK3O75914 559 aaPredicted RBP10.96□□□□□ -0.65
SMG6-211ENST00000572369 TRIM37O94972 964 aa10.96□□□□□ -0.65
SMG6-211ENST00000572369 HAP1P54257 671 aaPredicted RBP10.96□□□□□ -0.65
SMG6-211ENST00000572369 FAM98CQ17RN3 349 aaKnown RBP10.96□□□□□ -0.65
SMG6-211ENST00000572369 CCDC61Q9Y6R9 512 aa10.96□□□□□ -0.65
SMG6-211ENST00000572369 PTGER2P43116 358 aa10.95□□□□□ -0.66
SMG6-211ENST00000572369 GOLGB1Q14789 3259 aaKnown RBP10.94□□□□□ -0.66
SMG6-211ENST00000572369 PPIP5K1Q6PFW1 1433 aa10.94□□□□□ -0.66
SMG6-211ENST00000572369 SPATA31A3Q5VYP0 1347 aa10.94□□□□□ -0.66
SMG6-211ENST00000572369 TNS3Q68CZ2 1445 aa10.93□□□□□ -0.66
SMG6-211ENST00000572369 TRPM3Q9HCF6 1732 aaPredicted RBP10.92□□□□□ -0.66
SMG6-211ENST00000572369 SBNO1A3KN83 1393 aa10.92□□□□□ -0.66
SMG6-211ENST00000572369 ACEP12821 1306 aa10.92□□□□□ -0.66
SMG6-211ENST00000572369 ST20-MTHFSA0A0A6YYL1 179 aa10.92□□□□□ -0.66
SMG6-211ENST00000572369 DNAJC5GQ8N7S2 189 aa10.92□□□□□ -0.66
SMG6-211ENST00000572369 THSD7AQ9UPZ6 1657 aa10.92□□□□□ -0.66
SMG6-211ENST00000572369 ARHGEF10O15013 1369 aa10.91□□□□□ -0.66
SMG6-211ENST00000572369 USP47Q96K76 1375 aa10.91□□□□□ -0.66
SMG6-211ENST00000572369 SBNO2Q9Y2G9 1366 aa10.91□□□□□ -0.66
SMG6-211ENST00000572369 PLEKHG3A1L390 1219 aa10.91□□□□□ -0.66
SMG6-211ENST00000572369 SLC24A1O60721 1099 aa10.91□□□□□ -0.66
SMG6-211ENST00000572369 ZBTB7AO95365 584 aa10.91□□□□□ -0.66
SMG6-211ENST00000572369 APLP1P51693 650 aa10.91□□□□□ -0.66
SMG6-211ENST00000572369 GPR162Q16538 588 aa10.91□□□□□ -0.66
SMG6-211ENST00000572369 CABP1Q9NZU7 370 aa10.91□□□□□ -0.66
SMG6-211ENST00000572369 ATP10DQ9P241 1426 aa10.91□□□□□ -0.66
SMG6-211ENST00000572369 ALS2Q96Q42 1657 aa10.9□□□□□ -0.66
SMG6-211ENST00000572369 FAM196AQ6ZSG2 479 aa10.9□□□□□ -0.66
SMG6-211ENST00000572369 TMC1Q8TDI8 760 aa10.9□□□□□ -0.66
SMG6-211ENST00000572369 CABLES1Q8TDN4 633 aa10.89□□□□□ -0.67
SMG6-211ENST00000572369 NRAPQ86VF7 1730 aa10.89□□□□□ -0.67
SMG6-211ENST00000572369 POLR3AO14802 1390 aaPredicted RBP10.89□□□□□ -0.67
SMG6-211ENST00000572369 AKAP12Q02952 1782 aa10.88□□□□□ -0.67
SMG6-211ENST00000572369 TMF1P82094 1093 aa10.88□□□□□ -0.67
SMG6-211ENST00000572369 NUTM2GQ5VZR2 741 aa10.88□□□□□ -0.67
SMG6-211ENST00000572369 ABCA3Q99758 1704 aa10.88□□□□□ -0.67
SMG6-211ENST00000572369 PDGFDQ9GZP0 370 aaPredicted RBP10.88□□□□□ -0.67
SMG6-211ENST00000572369 GPBP1L1Q9HC44 474 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms