RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 HSPA5P11021 654 aaKnown RBP22.62■■□□□ 1.21
LITAF-210ENST00000571976 HAP1P54257 671 aaPredicted RBP22.61■■□□□ 1.21
LITAF-210ENST00000571976 CPSF1Q10570 1443 aaKnown RBP22.61■■□□□ 1.21
LITAF-210ENST00000571976 SLC12A5Q9H2X9 1139 aa22.61■■□□□ 1.21
LITAF-210ENST00000571976 RGS17Q9UGC6 210 aaPredicted RBP22.61■■□□□ 1.21
LITAF-210ENST00000571976 CABLES1Q8TDN4 633 aa22.6■■□□□ 1.21
LITAF-210ENST00000571976 C8orf37Q96NL8 207 aa22.6■■□□□ 1.21
LITAF-210ENST00000571976 NINLQ9Y2I6 1382 aa22.6■■□□□ 1.21
LITAF-210ENST00000571976 ABTB2Q8N961 1025 aa22.59■■□□□ 1.21
LITAF-210ENST00000571976 PLEKHG5O94827 1062 aa22.58■■□□□ 1.21
LITAF-210ENST00000571976 HDGFL2Q7Z4V5 671 aaPredicted RBP22.58■■□□□ 1.21
LITAF-210ENST00000571976 NGLY1Q96IV0 654 aa22.58■■□□□ 1.21
LITAF-210ENST00000571976 TERF2IPQ9NYB0 399 aa22.58■■□□□ 1.21
LITAF-210ENST00000571976 KTN1Q86UP2 1357 aaKnown RBP22.58■■□□□ 1.21
LITAF-210ENST00000571976 SSH2Q76I76 1423 aa22.57■■□□□ 1.2
LITAF-210ENST00000571976 ZNF772Q68DY9 489 aaPredicted RBP22.57■■□□□ 1.2
LITAF-210ENST00000571976 AKAP12Q02952 1782 aa22.57■■□□□ 1.2
LITAF-210ENST00000571976 CD163L1Q9NR16 1453 aa22.55■■□□□ 1.2
LITAF-210ENST00000571976 NLRP13Q86W25 1043 aa22.55■■□□□ 1.2
LITAF-210ENST00000571976 AFF2P51816 1311 aa22.55■■□□□ 1.2
LITAF-210ENST00000571976 TTC21BQ7Z4L5 1316 aa22.55■■□□□ 1.2
LITAF-210ENST00000571976 NUTM2GQ5VZR2 741 aa22.54■■□□□ 1.2
LITAF-210ENST00000571976 TTC21AQ8NDW8 1320 aa22.54■■□□□ 1.2
LITAF-210ENST00000571976 FNBP4Q8N3X1 1017 aaPredicted RBP22.53■■□□□ 1.2
LITAF-210ENST00000571976 ABCA3Q99758 1704 aa22.53■■□□□ 1.2
LITAF-210ENST00000571976 MARF1Q9Y4F3 1742 aaKnown RBP22.53■■□□□ 1.2
LITAF-210ENST00000571976 A0A1W2PP64 1363 aa22.51■■□□□ 1.19
LITAF-210ENST00000571976 MON2Q7Z3U7 1717 aa22.51■■□□□ 1.19
LITAF-210ENST00000571976 NLRP6P59044 892 aa22.51■■□□□ 1.19
LITAF-210ENST00000571976 POTEAQ6S8J7 498 aa22.51■■□□□ 1.19
LITAF-210ENST00000571976 EDC4Q6P2E9 1401 aaKnown RBP22.49■■□□□ 1.19
LITAF-210ENST00000571976 CRYBG1Q9Y4K1 1723 aa22.49■■□□□ 1.19
LITAF-210ENST00000571976 NRKQ7Z2Y5 1582 aa22.49■■□□□ 1.19
LITAF-210ENST00000571976 USP19O94966 1318 aa22.49■■□□□ 1.19
LITAF-210ENST00000571976 ANKRD36BQ8N2N9 1353 aa22.49■■□□□ 1.19
LITAF-210ENST00000571976 USP21Q9UK80 565 aa22.48■■□□□ 1.19
LITAF-210ENST00000571976 FAM83GA6ND36 823 aa22.47■■□□□ 1.19
LITAF-210ENST00000571976 ILDR2Q71H61 639 aa22.47■■□□□ 1.19
LITAF-210ENST00000571976 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.47■■□□□ 1.19
LITAF-210ENST00000571976 PHRF1Q9P1Y6 1649 aaKnown RBP22.46■■□□□ 1.19
LITAF-210ENST00000571976 PIK3C2AO00443 1686 aa22.46■■□□□ 1.19
LITAF-210ENST00000571976 GCP02774 474 aa22.46■■□□□ 1.19
LITAF-210ENST00000571976 POLR3GLQ9BT43 218 aa22.45■■□□□ 1.18
LITAF-210ENST00000571976 SLIT2O94813 1529 aa22.44■■□□□ 1.18
LITAF-210ENST00000571976 ZC3H6P61129 1189 aaKnown RBP22.44■■□□□ 1.18
LITAF-210ENST00000571976 QTRT2Q9H974 415 aaKnown RBP22.44■■□□□ 1.18
LITAF-210ENST00000571976 BCL9LQ86UU0 1499 aa22.43■■□□□ 1.18
LITAF-210ENST00000571976 USP31Q70CQ4 1352 aa22.43■■□□□ 1.18
LITAF-210ENST00000571976 PRDM11Q9NQV5 511 aa22.43■■□□□ 1.18
LITAF-210ENST00000571976 TRPC5Q9UL62 973 aaPredicted RBP22.43■■□□□ 1.18
LITAF-210ENST00000571976 KIAA0232Q92628 1395 aa22.42■■□□□ 1.18
LITAF-210ENST00000571976 C11orf95C9JLR9 678 aaPredicted RBP22.42■■□□□ 1.18
LITAF-210ENST00000571976 NME9Q86XW9 330 aa22.42■■□□□ 1.18
LITAF-210ENST00000571976 UNC5CLQ8IV45 518 aa22.42■■□□□ 1.18
LITAF-210ENST00000571976 KCNH5Q8NCM2 988 aa22.42■■□□□ 1.18
LITAF-210ENST00000571976 SLIT3O75094 1523 aa22.41■■□□□ 1.18
LITAF-210ENST00000571976 RXRBP28702 533 aa22.41■■□□□ 1.18
LITAF-210ENST00000571976 MYOM1P52179 1685 aa22.41■■□□□ 1.18
LITAF-210ENST00000571976 COL14A1Q05707 1796 aaKnown RBP22.4■■□□□ 1.18
LITAF-210ENST00000571976 CPDO75976 1380 aa22.4■■□□□ 1.18
LITAF-210ENST00000571976 BTG4Q9NY30 223 aa22.39■■□□□ 1.17
LITAF-210ENST00000571976 ZRANB1Q9UGI0 708 aa22.39■■□□□ 1.17
LITAF-210ENST00000571976 NWD2Q9ULI1 1742 aa22.39■■□□□ 1.17
LITAF-210ENST00000571976 RBM6P78332 1123 aaKnown RBP22.38■■□□□ 1.17
LITAF-210ENST00000571976 CHRNA2Q15822 529 aa22.38■■□□□ 1.17
LITAF-210ENST00000571976 PLCH1Q4KWH8 1693 aa22.38■■□□□ 1.17
LITAF-210ENST00000571976 ATRNO75882 1429 aa22.38■■□□□ 1.17
LITAF-210ENST00000571976 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.37■■□□□ 1.17
LITAF-210ENST00000571976 CARD14Q9BXL6 1004 aa22.36■■□□□ 1.17
LITAF-210ENST00000571976 USP54Q70EL1 1684 aa22.36■■□□□ 1.17
LITAF-210ENST00000571976 KIF7Q2M1P5 1343 aa22.35■■□□□ 1.17
LITAF-210ENST00000571976 OVOS2A0A0J9YW53 1432 aa22.34■■□□□ 1.17
LITAF-210ENST00000571976 OVOS2Q6IE36 1432 aa22.34■■□□□ 1.17
LITAF-210ENST00000571976 SOX12O15370 315 aa22.34■■□□□ 1.17
LITAF-210ENST00000571976 VPS72Q15906 364 aa22.34■■□□□ 1.17
LITAF-210ENST00000571976 COG3Q96JB2 828 aa22.34■■□□□ 1.17
LITAF-210ENST00000571976 GJD4Q96KN9 370 aaPredicted RBP22.34■■□□□ 1.17
LITAF-210ENST00000571976 FYB1O15117 783 aa22.33■■□□□ 1.17
LITAF-210ENST00000571976 ZEB1P37275 1124 aaPredicted RBP22.33■■□□□ 1.17
LITAF-210ENST00000571976 NSD3Q9BZ95 1437 aa22.32■■□□□ 1.16
LITAF-210ENST00000571976 ARHGEF25Q86VW2 580 aa22.32■■□□□ 1.16
LITAF-210ENST00000571976 CDK12Q9NYV4 1490 aaPredicted RBP22.31■■□□□ 1.16
LITAF-210ENST00000571976 AATKQ6ZMQ8 1374 aa22.31■■□□□ 1.16
LITAF-210ENST00000571976 ZBTB7CA1YPR0 619 aa22.31■■□□□ 1.16
LITAF-210ENST00000571976 PANK3Q9H999 370 aa22.31■■□□□ 1.16
LITAF-210ENST00000571976 NFAT5O94916 1531 aa22.31■■□□□ 1.16
LITAF-210ENST00000571976 EVA1CP58658 441 aa22.3■■□□□ 1.16
LITAF-210ENST00000571976 GGNBP2Q9H3C7 697 aa22.3■■□□□ 1.16
LITAF-210ENST00000571976 CCDC9Q9Y3X0 531 aaKnown RBP22.3■■□□□ 1.16
LITAF-210ENST00000571976 NRAPQ86VF7 1730 aa22.3■■□□□ 1.16
LITAF-210ENST00000571976 CAMTA1Q9Y6Y1 1673 aa22.29■■□□□ 1.16
LITAF-210ENST00000571976 LMO7Q8WWI1 1683 aa22.28■■□□□ 1.16
LITAF-210ENST00000571976 STRN4Q9NRL3 753 aa22.28■■□□□ 1.16
LITAF-210ENST00000571976 CGNL1Q0VF96 1302 aa22.28■■□□□ 1.16
LITAF-210ENST00000571976 CCDC7Q96M83 1385 aa22.27■■□□□ 1.16
LITAF-210ENST00000571976 WASHC2AQ641Q2 1341 aa22.27■■□□□ 1.16
LITAF-210ENST00000571976 KIF20BQ96Q89 1820 aa22.25■■□□□ 1.15
LITAF-210ENST00000571976 GLI3P10071 1580 aa22.25■■□□□ 1.15
LITAF-210ENST00000571976 AXIN2Q9Y2T1 843 aa22.24■■□□□ 1.15
LITAF-210ENST00000571976 COL18A1P39060 1754 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms