RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 RIPK4P57078 832 aa22.05■■□□□ 1.12
SCARF1-205ENST00000571272 GLI2P10070 1586 aa22.05■■□□□ 1.12
SCARF1-205ENST00000571272 ADGRB2O60241 1585 aa22.04■■□□□ 1.12
SCARF1-205ENST00000571272 PUS7Q96PZ0 661 aaKnown RBP22.04■■□□□ 1.12
SCARF1-205ENST00000571272 CHMP5Q9NZZ3 219 aa22.04■■□□□ 1.12
SCARF1-205ENST00000571272 SMC5Q8IY18 1101 aa22.03■■□□□ 1.12
SCARF1-205ENST00000571272 RRAGDQ9NQL2 400 aaPredicted RBP22.02■■□□□ 1.12
SCARF1-205ENST00000571272 XRCC6P12956 609 aaKnown RBP eCLIP22.02■■□□□ 1.12
SCARF1-205ENST00000571272 LNPKQ9C0E8 428 aa22.02■■□□□ 1.12
SCARF1-205ENST00000571272 GOLGA6L3A6NEY3 463 aa22.01■■□□□ 1.11
SCARF1-205ENST00000571272 ZBTB40Q9NUA8 1239 aa22.01■■□□□ 1.11
SCARF1-205ENST00000571272 FYB1O15117 783 aa22.01■■□□□ 1.11
SCARF1-205ENST00000571272 MINK1Q8N4C8 1332 aaPredicted RBP22.01■■□□□ 1.11
SCARF1-205ENST00000571272 HSCBQ8IWL3 235 aa22.01■■□□□ 1.11
SCARF1-205ENST00000571272 ABCC11Q96J66 1382 aa22■■□□□ 1.11
SCARF1-205ENST00000571272 TRAK2O60296 914 aa21.99■■□□□ 1.11
SCARF1-205ENST00000571272 PANK2Q9BZ23 570 aa21.99■■□□□ 1.11
SCARF1-205ENST00000571272 ARHGEF28Q8N1W1 1705 aaKnown RBP21.98■■□□□ 1.11
SCARF1-205ENST00000571272 FRMPD1Q5SYB0 1578 aa21.98■■□□□ 1.11
SCARF1-205ENST00000571272 DIAPH1O60610 1272 aaKnown RBP21.97■■□□□ 1.11
SCARF1-205ENST00000571272 IDI1Q13907 227 aa21.97■■□□□ 1.11
SCARF1-205ENST00000571272 IPO8O15397 1037 aaKnown RBP21.97■■□□□ 1.11
SCARF1-205ENST00000571272 FBLN1P23142 703 aa21.96■■□□□ 1.11
SCARF1-205ENST00000571272 FSD2A1L4K1 749 aa21.96■■□□□ 1.11
SCARF1-205ENST00000571272 RSPH6AQ9H0K4 717 aa21.96■■□□□ 1.11
SCARF1-205ENST00000571272 IL16Q14005 1332 aa21.96■■□□□ 1.11
SCARF1-205ENST00000571272 KIF16BQ96L93 1317 aa21.96■■□□□ 1.11
SCARF1-205ENST00000571272 ABCC3O15438 1527 aa21.95■■□□□ 1.1
SCARF1-205ENST00000571272 NUCB1Q02818 461 aa21.95■■□□□ 1.1
SCARF1-205ENST00000571272 TERF2IPQ9NYB0 399 aa21.95■■□□□ 1.1
SCARF1-205ENST00000571272 CAMSAP1Q5T5Y3 1602 aa21.95■■□□□ 1.1
SCARF1-205ENST00000571272 COL3A1P02461 1466 aaPredicted RBP21.95■■□□□ 1.1
SCARF1-205ENST00000571272 RAPGEF3O95398 923 aa21.94■■□□□ 1.1
SCARF1-205ENST00000571272 PRAM1Q96QH2 718 aa21.94■■□□□ 1.1
SCARF1-205ENST00000571272 POGZQ7Z3K3 1410 aa21.94■■□□□ 1.1
SCARF1-205ENST00000571272 NPM1P06748 294 aaKnown RBP eCLIP21.93■■□□□ 1.1
SCARF1-205ENST00000571272 CHD1LQ86WJ1 897 aa21.93■■□□□ 1.1
SCARF1-205ENST00000571272 ZNF692Q9BU19 519 aaPredicted RBP21.93■■□□□ 1.1
SCARF1-205ENST00000571272 NEXMIFQ5QGS0 1516 aa21.93■■□□□ 1.1
SCARF1-205ENST00000571272 C1orf115Q9H7X2 142 aa21.93■■□□□ 1.1
SCARF1-205ENST00000571272 HECW2Q9P2P5 1572 aa21.92■■□□□ 1.1
SCARF1-205ENST00000571272 SIGLEC1Q9BZZ2 1709 aa21.92■■□□□ 1.1
SCARF1-205ENST00000571272 ANKRD45Q5TZF3 282 aa21.91■■□□□ 1.1
SCARF1-205ENST00000571272 MLH3Q9UHC1 1453 aa21.9■■□□□ 1.1
SCARF1-205ENST00000571272 PRKAR2BP31323 418 aa21.9■■□□□ 1.1
SCARF1-205ENST00000571272 THUMPD2Q9BTF0 503 aaKnown RBP21.9■■□□□ 1.1
SCARF1-205ENST00000571272 RBM25P49756 843 aaKnown RBP21.9■■□□□ 1.1
SCARF1-205ENST00000571272 ELL2O00472 640 aaPredicted RBP21.89■■□□□ 1.09
SCARF1-205ENST00000571272 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.89■■□□□ 1.09
SCARF1-205ENST00000571272 CABP1Q9NZU7 370 aa21.89■■□□□ 1.09
SCARF1-205ENST00000571272 ALDH1L2Q3SY69 923 aa21.89■■□□□ 1.09
SCARF1-205ENST00000571272 FOXD4L1Q9NU39 408 aa21.89■■□□□ 1.09
SCARF1-205ENST00000571272 HSP90AB1P08238 724 aaKnown RBP21.88■■□□□ 1.09
SCARF1-205ENST00000571272 ATAD2Q6PL18 1390 aa21.88■■□□□ 1.09
SCARF1-205ENST00000571272 HDGFL2Q7Z4V5 671 aaPredicted RBP21.88■■□□□ 1.09
SCARF1-205ENST00000571272 PNNQ9H307 717 aaKnown RBP21.88■■□□□ 1.09
SCARF1-205ENST00000571272 HMOX1P09601 288 aa21.87■■□□□ 1.09
SCARF1-205ENST00000571272 DDX11L8A8MPP1 907 aa21.87■■□□□ 1.09
SCARF1-205ENST00000571272 FCHSD2O94868 740 aa21.86■■□□□ 1.09
SCARF1-205ENST00000571272 TNPO1Q92973 898 aaKnown RBP21.86■■□□□ 1.09
SCARF1-205ENST00000571272 CDK19Q9BWU1 502 aa21.86■■□□□ 1.09
SCARF1-205ENST00000571272 CD163L1Q9NR16 1453 aa21.86■■□□□ 1.09
SCARF1-205ENST00000571272 PHACTR3Q96KR7 559 aa21.85■■□□□ 1.09
SCARF1-205ENST00000571272 ZBTB7BO15156 539 aaPredicted RBP21.85■■□□□ 1.09
SCARF1-205ENST00000571272 DDIT3P35638 169 aa21.85■■□□□ 1.09
SCARF1-205ENST00000571272 TSPYL6Q8N831 410 aa21.85■■□□□ 1.09
SCARF1-205ENST00000571272 SNX21Q969T3 373 aa21.85■■□□□ 1.09
SCARF1-205ENST00000571272 BMP2KLQ5H9B9 411 aa21.85■■□□□ 1.09
SCARF1-205ENST00000571272 CD2BP2O95400 341 aaKnown RBP21.84■■□□□ 1.09
SCARF1-205ENST00000571272 HSP90AA1P07900 732 aaKnown RBP21.84■■□□□ 1.09
SCARF1-205ENST00000571272 MRE11P49959 708 aa21.84■■□□□ 1.09
SCARF1-205ENST00000571272 PNPLA6Q8IY17 1366 aa21.84■■□□□ 1.09
SCARF1-205ENST00000571272 PPIP5K1Q6PFW1 1433 aa21.83■■□□□ 1.09
SCARF1-205ENST00000571272 KIF2CQ99661 725 aa21.83■■□□□ 1.08
SCARF1-205ENST00000571272 NCOA3Q9Y6Q9 1424 aa21.83■■□□□ 1.08
SCARF1-205ENST00000571272 PIK3C2BO00750 1634 aa21.83■■□□□ 1.08
SCARF1-205ENST00000571272 PTPRMP28827 1452 aa21.82■■□□□ 1.08
SCARF1-205ENST00000571272 VAMP4O75379 141 aa21.82■■□□□ 1.08
SCARF1-205ENST00000571272 RBM42Q9BTD8 480 aaKnown RBP21.82■■□□□ 1.08
SCARF1-205ENST00000571272 GRPEL1Q9HAV7 217 aa21.82■■□□□ 1.08
SCARF1-205ENST00000571272 POLKQ9UBT6 870 aa21.82■■□□□ 1.08
SCARF1-205ENST00000571272 MRPL50Q8N5N7 158 aaKnown RBP21.81■■□□□ 1.08
SCARF1-205ENST00000571272 SLC52A1Q9NWF4 448 aa21.81■■□□□ 1.08
SCARF1-205ENST00000571272 TBC1D9Q6ZT07 1266 aa21.81■■□□□ 1.08
SCARF1-205ENST00000571272 LRRC7Q96NW7 1537 aa21.8■■□□□ 1.08
SCARF1-205ENST00000571272 YTHDC2Q9H6S0 1430 aaKnown RBP21.8■■□□□ 1.08
SCARF1-205ENST00000571272 SIRT2Q8IXJ6 389 aa21.8■■□□□ 1.08
SCARF1-205ENST00000571272 GCC1Q96CN9 775 aa21.8■■□□□ 1.08
SCARF1-205ENST00000571272 MED14O60244 1454 aa21.79■■□□□ 1.08
SCARF1-205ENST00000571272 NFE2L2Q16236 605 aa21.79■■□□□ 1.08
SCARF1-205ENST00000571272 GBP4Q96PP9 640 aa21.77■■□□□ 1.08
SCARF1-205ENST00000571272 ZFYVE9O95405 1425 aa21.77■■□□□ 1.08
SCARF1-205ENST00000571272 BRPF1P55201 1214 aaPredicted RBP21.77■■□□□ 1.08
SCARF1-205ENST00000571272 RAB3GAP1Q15042 981 aa21.77■■□□□ 1.08
SCARF1-205ENST00000571272 ZNF428Q96B54 188 aa21.77■■□□□ 1.08
SCARF1-205ENST00000571272 EMILIN1Q9Y6C2 1016 aa21.77■■□□□ 1.08
SCARF1-205ENST00000571272 FAM135BQ49AJ0 1406 aa21.77■■□□□ 1.08
SCARF1-205ENST00000571272 FBXO31Q5XUX0 539 aaPredicted RBP21.76■■□□□ 1.07
SCARF1-205ENST00000571272 GAS2L3Q86XJ1 694 aa21.76■■□□□ 1.07
SCARF1-205ENST00000571272 MBIPQ9NS73 344 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms