RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 NUTM2AQ8IVF1 878 aaPredicted RBP9.7□□□□□ -0.86
KARSP3-201ENST00000571212 PER1O15534 1290 aaPredicted RBP9.69□□□□□ -0.86
KARSP3-201ENST00000571212 AVPP01185 164 aa9.69□□□□□ -0.86
KARSP3-201ENST00000571212 RTL5Q5HYW3 569 aaPredicted RBP9.69□□□□□ -0.86
KARSP3-201ENST00000571212 PRPF38BQ5VTL8 546 aaKnown RBP9.69□□□□□ -0.86
KARSP3-201ENST00000571212 DCAF1Q9Y4B6 1507 aa9.69□□□□□ -0.86
KARSP3-201ENST00000571212 CTHP32929 405 aa9.68□□□□□ -0.86
KARSP3-201ENST00000571212 FAM117AQ9C073 453 aa9.68□□□□□ -0.86
KARSP3-201ENST00000571212 KDM4CQ9H3R0 1056 aa9.68□□□□□ -0.86
KARSP3-201ENST00000571212 MAP10Q9P2G4 905 aa9.68□□□□□ -0.86
KARSP3-201ENST00000571212 ZCCHC6Q5VYS8 1495 aaKnown RBP9.68□□□□□ -0.86
KARSP3-201ENST00000571212 LILRB3O75022 631 aa9.67□□□□□ -0.86
KARSP3-201ENST00000571212 CLK2P49760 499 aaKnown RBP9.67□□□□□ -0.86
KARSP3-201ENST00000571212 EHBP1Q8NDI1 1231 aa9.67□□□□□ -0.86
KARSP3-201ENST00000571212 AXIN1O15169 862 aa9.66□□□□□ -0.86
KARSP3-201ENST00000571212 SIAH2O43255 324 aa9.66□□□□□ -0.86
KARSP3-201ENST00000571212 ALDH1A1P00352 501 aa9.66□□□□□ -0.86
KARSP3-201ENST00000571212 HPS1Q92902 700 aa9.66□□□□□ -0.86
KARSP3-201ENST00000571212 FBXO31Q5XUX0 539 aaPredicted RBP9.65□□□□□ -0.86
KARSP3-201ENST00000571212 CRIPAKQ8N1N5 446 aa9.65□□□□□ -0.86
KARSP3-201ENST00000571212 F12P00748 615 aaPredicted RBP9.64□□□□□ -0.87
KARSP3-201ENST00000571212 TUSC1Q2TAM9 212 aa9.64□□□□□ -0.87
KARSP3-201ENST00000571212 ZNF511Q8NB15 262 aa9.64□□□□□ -0.87
KARSP3-201ENST00000571212 RSPH6AQ9H0K4 717 aa9.64□□□□□ -0.87
KARSP3-201ENST00000571212 CC2D2AQ9P2K1 1620 aa9.63□□□□□ -0.87
KARSP3-201ENST00000571212 SMCPP49901 116 aaPredicted RBP9.62□□□□□ -0.87
KARSP3-201ENST00000571212 CTC1Q2NKJ3 1217 aa9.62□□□□□ -0.87
KARSP3-201ENST00000571212 PROCA1Q8NCQ7 364 aaPredicted RBP9.62□□□□□ -0.87
KARSP3-201ENST00000571212 ZNF775Q96BV0 537 aaPredicted RBP9.62□□□□□ -0.87
KARSP3-201ENST00000571212 GMPR2Q9P2T1 348 aaKnown RBP9.62□□□□□ -0.87
KARSP3-201ENST00000571212 PLEKHG3A1L390 1219 aa9.61□□□□□ -0.87
KARSP3-201ENST00000571212 TLL2Q9Y6L7 1015 aa9.61□□□□□ -0.87
KARSP3-201ENST00000571212 CECR2Q9BXF3 1484 aa9.61□□□□□ -0.87
KARSP3-201ENST00000571212 FOXJ1Q92949 421 aa9.61□□□□□ -0.87
KARSP3-201ENST00000571212 SCRIBQ14160 1630 aa9.6□□□□□ -0.87
KARSP3-201ENST00000571212 CTDSPL2Q05D32 466 aa9.59□□□□□ -0.87
KARSP3-201ENST00000571212 SKIV2LQ15477 1246 aaKnown RBP9.59□□□□□ -0.87
KARSP3-201ENST00000571212 ATP1B4Q9UN42 357 aaPredicted RBP9.59□□□□□ -0.87
KARSP3-201ENST00000571212 EIF4G1Q04637 1599 aaKnown RBP9.58□□□□□ -0.88
KARSP3-201ENST00000571212 WASF2Q9Y6W5 498 aa9.58□□□□□ -0.88
KARSP3-201ENST00000571212 HELBQ8NG08 1087 aaPredicted RBP9.57□□□□□ -0.88
KARSP3-201ENST00000571212 DDRGK1Q96HY6 314 aa9.57□□□□□ -0.88
KARSP3-201ENST00000571212 SH3D19Q5HYK7 790 aa9.56□□□□□ -0.88
KARSP3-201ENST00000571212 ATP13A2Q9NQ11 1180 aa9.56□□□□□ -0.88
KARSP3-201ENST00000571212 VARSP26640 1264 aaKnown RBP9.56□□□□□ -0.88
KARSP3-201ENST00000571212 C4orf48Q5BLP8 95 aa9.56□□□□□ -0.88
KARSP3-201ENST00000571212 C11orf95C9JLR9 678 aaPredicted RBP9.55□□□□□ -0.88
KARSP3-201ENST00000571212 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.55□□□□□ -0.88
KARSP3-201ENST00000571212 AGERQ15109 404 aa9.54□□□□□ -0.88
KARSP3-201ENST00000571212 LRRN4Q8WUT4 740 aa9.54□□□□□ -0.88
KARSP3-201ENST00000571212 NEUROD2Q15784 382 aa9.53□□□□□ -0.88
KARSP3-201ENST00000571212 ARID5BQ14865 1188 aa9.52□□□□□ -0.88
KARSP3-201ENST00000571212 BMP1P13497 986 aa9.51□□□□□ -0.89
KARSP3-201ENST00000571212 SNRPBP14678 240 aaKnown RBP9.51□□□□□ -0.89
KARSP3-201ENST00000571212 FAM174AQ8TBP5 190 aa9.51□□□□□ -0.89
KARSP3-201ENST00000571212 CAPN5O15484 640 aaPredicted RBP9.51□□□□□ -0.89
KARSP3-201ENST00000571212 NNTQ13423 1086 aa9.51□□□□□ -0.89
KARSP3-201ENST00000571212 PPP2R2DQ66LE6 453 aa9.5□□□□□ -0.89
KARSP3-201ENST00000571212 IL27Q8NEV9 243 aa9.5□□□□□ -0.89
KARSP3-201ENST00000571212 AP1G2O75843 785 aa9.49□□□□□ -0.89
KARSP3-201ENST00000571212 TRIM46Q7Z4K8 759 aa9.49□□□□□ -0.89
KARSP3-201ENST00000571212 BPHLQ86WA6 291 aaPredicted RBP9.49□□□□□ -0.89
KARSP3-201ENST00000571212 MPNDQ8N594 471 aa9.49□□□□□ -0.89
KARSP3-201ENST00000571212 MAGEB6P1A0A0J9YX57 407 aa9.48□□□□□ -0.89
KARSP3-201ENST00000571212 NR6A1Q15406 480 aa9.48□□□□□ -0.89
KARSP3-201ENST00000571212 ARMC2Q8NEN0 867 aa9.48□□□□□ -0.89
KARSP3-201ENST00000571212 ADH1CP00326 375 aa9.47□□□□□ -0.89
KARSP3-201ENST00000571212 TPRNQ4KMQ1 711 aa9.47□□□□□ -0.89
KARSP3-201ENST00000571212 SH3RF1Q7Z6J0 888 aa9.47□□□□□ -0.89
KARSP3-201ENST00000571212 CDK15Q96Q40 435 aa9.47□□□□□ -0.89
KARSP3-201ENST00000571212 CARD14Q9BXL6 1004 aa9.47□□□□□ -0.89
KARSP3-201ENST00000571212 GRM5P41594 1212 aa9.46□□□□□ -0.89
KARSP3-201ENST00000571212 BRPF1P55201 1214 aaPredicted RBP9.46□□□□□ -0.89
KARSP3-201ENST00000571212 SH3BP5LQ7L8J4 393 aa9.46□□□□□ -0.89
KARSP3-201ENST00000571212 TRIM47Q96LD4 638 aa9.46□□□□□ -0.89
KARSP3-201ENST00000571212 NR3C2P08235 984 aa9.46□□□□□ -0.9
KARSP3-201ENST00000571212 NBPF14Q5TI25 921 aa9.46□□□□□ -0.9
KARSP3-201ENST00000571212 EPS8L1Q8TE68 723 aa9.46□□□□□ -0.9
KARSP3-201ENST00000571212 TIMP2P16035 220 aa9.45□□□□□ -0.9
KARSP3-201ENST00000571212 WDR4P57081 412 aaKnown RBP9.45□□□□□ -0.9
KARSP3-201ENST00000571212 KLF16Q9BXK1 252 aaPredicted RBP9.45□□□□□ -0.9
KARSP3-201ENST00000571212 HMX1Q9NP08 348 aaPredicted RBP9.45□□□□□ -0.9
KARSP3-201ENST00000571212 RFC5P40937 340 aa9.44□□□□□ -0.9
KARSP3-201ENST00000571212 C1QTNF2Q9BXJ5 285 aa9.44□□□□□ -0.9
KARSP3-201ENST00000571212 SENP2Q9HC62 589 aa9.44□□□□□ -0.9
KARSP3-201ENST00000571212 ZFAND3Q9H8U3 227 aa9.43□□□□□ -0.9
KARSP3-201ENST00000571212 FKBPLQ9UIM3 349 aa9.43□□□□□ -0.9
KARSP3-201ENST00000571212 USP17L8P0C7I0 530 aa9.42□□□□□ -0.9
KARSP3-201ENST00000571212 ITPKCQ96DU7 683 aa9.42□□□□□ -0.9
KARSP3-201ENST00000571212 ZIC2O95409 532 aaPredicted RBP9.41□□□□□ -0.9
KARSP3-201ENST00000571212 TREML4Q6UXN2 200 aa9.41□□□□□ -0.9
KARSP3-201ENST00000571212 PCMTD1Q96MG8 357 aaPredicted RBP9.41□□□□□ -0.9
KARSP3-201ENST00000571212 ZFP42Q96MM3 310 aa9.41□□□□□ -0.9
KARSP3-201ENST00000571212 NR5A1Q13285 461 aa9.41□□□□□ -0.9
KARSP3-201ENST00000571212 ERFEQ4G0M1 354 aa9.41□□□□□ -0.9
KARSP3-201ENST00000571212 LCE2AQ5TA79 106 aaPredicted RBP9.41□□□□□ -0.9
KARSP3-201ENST00000571212 VASH1Q7L8A9 365 aaPredicted RBP9.41□□□□□ -0.9
KARSP3-201ENST00000571212 FSHRP23945 695 aa9.4□□□□□ -0.91
KARSP3-201ENST00000571212 KIFC2Q96AC6 838 aa9.4□□□□□ -0.91
KARSP3-201ENST00000571212 OCSTAMPQ9BR26 566 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms