RNA–Protein interactions for RNA: ENST00000570977.1

TOM1L1-208, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1L1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-208ENST00000570977 MBD5Q9P267 1494 aa9.4□□□□□ -0.9
TOM1L1-208ENST00000570977 IQGAP1P46940 1657 aa9.4□□□□□ -0.9
TOM1L1-208ENST00000570977 DMRTA1Q5VZB9 504 aa9.4□□□□□ -0.9
TOM1L1-208ENST00000570977 ADGBQ8N7X0 1667 aa9.39□□□□□ -0.91
TOM1L1-208ENST00000570977 SPDYE16A6NNV3 312 aaPredicted RBP9.39□□□□□ -0.91
TOM1L1-208ENST00000570977 LTKP29376 864 aa9.39□□□□□ -0.91
TOM1L1-208ENST00000570977 KDM5DQ9BY66 1539 aa9.39□□□□□ -0.91
TOM1L1-208ENST00000570977 CCNB3Q8WWL7 1395 aa9.38□□□□□ -0.91
TOM1L1-208ENST00000570977 ZNF644Q9H582 1327 aaPredicted RBP9.38□□□□□ -0.91
TOM1L1-208ENST00000570977 GRXCR2A6NFK2 248 aa9.38□□□□□ -0.91
TOM1L1-208ENST00000570977 PHF14O94880 888 aa9.38□□□□□ -0.91
TOM1L1-208ENST00000570977 NBR1Q14596 966 aa9.38□□□□□ -0.91
TOM1L1-208ENST00000570977 RSPH4AQ5TD94 716 aa9.38□□□□□ -0.91
TOM1L1-208ENST00000570977 RBM33Q96EV2 1170 aaKnown RBP9.38□□□□□ -0.91
TOM1L1-208ENST00000570977 BCL2L12Q9HB09 334 aa9.38□□□□□ -0.91
TOM1L1-208ENST00000570977 ARIH1Q9Y4X5 557 aaPredicted RBP9.38□□□□□ -0.91
TOM1L1-208ENST00000570977 TYW1BQ6NUM6 668 aa9.37□□□□□ -0.91
TOM1L1-208ENST00000570977 TXNDC2Q86VQ3 553 aa9.37□□□□□ -0.91
TOM1L1-208ENST00000570977 PTPREP23469 700 aa9.36□□□□□ -0.91
TOM1L1-208ENST00000570977 ZNF772Q68DY9 489 aaPredicted RBP9.36□□□□□ -0.91
TOM1L1-208ENST00000570977 JCADQ9P266 1359 aa9.36□□□□□ -0.91
TOM1L1-208ENST00000570977 ZC3H13Q5T200 1668 aaKnown RBP9.36□□□□□ -0.91
TOM1L1-208ENST00000570977 SCAF11Q99590 1463 aaKnown RBP9.35□□□□□ -0.91
TOM1L1-208ENST00000570977 ARHGAP23Q9P227 1491 aa9.35□□□□□ -0.91
TOM1L1-208ENST00000570977 KCNA6P17658 529 aa9.35□□□□□ -0.91
TOM1L1-208ENST00000570977 ARHGEF1Q92888 912 aaKnown RBP9.35□□□□□ -0.91
TOM1L1-208ENST00000570977 TMEM94Q12767 1356 aa9.35□□□□□ -0.91
TOM1L1-208ENST00000570977 PTGER2P43116 358 aa9.34□□□□□ -0.91
TOM1L1-208ENST00000570977 MMRN1Q13201 1228 aa9.34□□□□□ -0.91
TOM1L1-208ENST00000570977 NCOA2Q15596 1464 aa9.34□□□□□ -0.91
TOM1L1-208ENST00000570977 FYCO1Q9BQS8 1478 aa9.34□□□□□ -0.91
TOM1L1-208ENST00000570977 XIRP1Q702N8 1843 aaKnown RBP9.33□□□□□ -0.92
TOM1L1-208ENST00000570977 SLIT1O75093 1534 aa9.33□□□□□ -0.92
TOM1L1-208ENST00000570977 ADGRD1Q6QNK2 874 aa9.33□□□□□ -0.92
TOM1L1-208ENST00000570977 FBXW7Q969H0 707 aa9.33□□□□□ -0.92
TOM1L1-208ENST00000570977 EPAS1Q99814 870 aa9.33□□□□□ -0.92
TOM1L1-208ENST00000570977 SLAIN2Q9P270 581 aa9.33□□□□□ -0.92
TOM1L1-208ENST00000570977 EID1Q9Y6B2 187 aa9.33□□□□□ -0.92
TOM1L1-208ENST00000570977 SETD1AO15047 1707 aaKnown RBP9.33□□□□□ -0.92
TOM1L1-208ENST00000570977 SPATA31A6Q5VVP1 1343 aa9.32□□□□□ -0.92
TOM1L1-208ENST00000570977 MAP3K7O43318 606 aa9.32□□□□□ -0.92
TOM1L1-208ENST00000570977 RXRBP28702 533 aa9.32□□□□□ -0.92
TOM1L1-208ENST00000570977 TMEM132AQ24JP5 1023 aa9.32□□□□□ -0.92
TOM1L1-208ENST00000570977 PROSER2Q86WR7 435 aaPredicted RBP9.32□□□□□ -0.92
TOM1L1-208ENST00000570977 ERVK-7P63135 1459 aa9.32□□□□□ -0.92
TOM1L1-208ENST00000570977 LRRC9Q6ZRR7 1453 aa9.32□□□□□ -0.92
TOM1L1-208ENST00000570977 MLLT3P42568 568 aaPredicted RBP9.31□□□□□ -0.92
TOM1L1-208ENST00000570977 PRIM1P49642 420 aaKnown RBP9.31□□□□□ -0.92
TOM1L1-208ENST00000570977 TRIM52Q96A61 297 aa9.31□□□□□ -0.92
TOM1L1-208ENST00000570977 ROBO1Q9Y6N7 1651 aa9.31□□□□□ -0.92
TOM1L1-208ENST00000570977 CDK12Q9NYV4 1490 aaPredicted RBP9.3□□□□□ -0.92
TOM1L1-208ENST00000570977 COL9A1P20849 921 aa9.3□□□□□ -0.92
TOM1L1-208ENST00000570977 EN1Q05925 392 aaPredicted RBP9.3□□□□□ -0.92
TOM1L1-208ENST00000570977 TSR1Q2NL82 804 aaKnown RBP9.3□□□□□ -0.92
TOM1L1-208ENST00000570977 FGD6Q6ZV73 1430 aa9.3□□□□□ -0.92
TOM1L1-208ENST00000570977 CCDC141Q6ZP82 1450 aa9.29□□□□□ -0.92
TOM1L1-208ENST00000570977 MTUS2Q5JR59 1369 aa9.29□□□□□ -0.92
TOM1L1-208ENST00000570977 TMEM2Q9UHN6 1383 aa9.29□□□□□ -0.92
TOM1L1-208ENST00000570977 TSPY4P0CV99 314 aa9.29□□□□□ -0.92
TOM1L1-208ENST00000570977 TSPY10P0CW01 314 aa9.29□□□□□ -0.92
TOM1L1-208ENST00000570977 C6orf132Q5T0Z8 1188 aa9.29□□□□□ -0.92
TOM1L1-208ENST00000570977 ABCC3O15438 1527 aa9.29□□□□□ -0.92
TOM1L1-208ENST00000570977 MAP3K1Q13233 1512 aa9.29□□□□□ -0.92
TOM1L1-208ENST00000570977 UBR1Q8IWV7 1749 aa9.28□□□□□ -0.92
TOM1L1-208ENST00000570977 SRCAPQ6ZRS2 3230 aa9.28□□□□□ -0.92
TOM1L1-208ENST00000570977 LRP6O75581 1613 aa9.28□□□□□ -0.92
TOM1L1-208ENST00000570977 PRDM15P57071 1507 aaPredicted RBP9.28□□□□□ -0.92
TOM1L1-208ENST00000570977 PPP1R3GB7ZBB8 358 aa9.28□□□□□ -0.92
TOM1L1-208ENST00000570977 C14orf37Q86TY3 774 aa9.28□□□□□ -0.92
TOM1L1-208ENST00000570977 ZBED2Q9BTP6 218 aa9.28□□□□□ -0.92
TOM1L1-208ENST00000570977 MSH6P52701 1360 aa9.27□□□□□ -0.93
TOM1L1-208ENST00000570977 TK2O00142 265 aa9.27□□□□□ -0.93
TOM1L1-208ENST00000570977 SEMA3EO15041 775 aa9.27□□□□□ -0.93
TOM1L1-208ENST00000570977 PROX2Q3B8N5 592 aa9.27□□□□□ -0.93
TOM1L1-208ENST00000570977 MEX3CQ5U5Q3 659 aaKnown RBP9.27□□□□□ -0.93
TOM1L1-208ENST00000570977 RNF166Q96A37 237 aaPredicted RBP9.27□□□□□ -0.93
TOM1L1-208ENST00000570977 VPS9D1Q9Y2B5 631 aa9.27□□□□□ -0.93
TOM1L1-208ENST00000570977 ARHGAP31Q2M1Z3 1444 aa9.27□□□□□ -0.93
TOM1L1-208ENST00000570977 TET3O43151 1660 aa9.26□□□□□ -0.93
TOM1L1-208ENST00000570977 TIAM1Q13009 1591 aa9.26□□□□□ -0.93
TOM1L1-208ENST00000570977 CEP162Q5TB80 1403 aa9.26□□□□□ -0.93
TOM1L1-208ENST00000570977 OSBPP22059 807 aa9.26□□□□□ -0.93
TOM1L1-208ENST00000570977 SLC26A8Q96RN1 970 aa9.26□□□□□ -0.93
TOM1L1-208ENST00000570977 CDHR5Q9HBB8 845 aa9.26□□□□□ -0.93
TOM1L1-208ENST00000570977 CAMSAP2Q08AD1 1489 aa9.26□□□□□ -0.93
TOM1L1-208ENST00000570977 NCOA3Q9Y6Q9 1424 aa9.25□□□□□ -0.93
TOM1L1-208ENST00000570977 NKTRP30414 1462 aaKnown RBP9.25□□□□□ -0.93
TOM1L1-208ENST00000570977 COL16A1Q07092 1604 aaPredicted RBP9.24□□□□□ -0.93
TOM1L1-208ENST00000570977 HRO43593 1189 aa9.24□□□□□ -0.93
TOM1L1-208ENST00000570977 IDI1Q13907 227 aa9.24□□□□□ -0.93
TOM1L1-208ENST00000570977 PHLPP1O60346 1717 aa9.24□□□□□ -0.93
TOM1L1-208ENST00000570977 RBM6P78332 1123 aaKnown RBP9.23□□□□□ -0.93
TOM1L1-208ENST00000570977 STAC3Q96MF2 364 aa9.23□□□□□ -0.93
TOM1L1-208ENST00000570977 QTRT2Q9H974 415 aaKnown RBP9.22□□□□□ -0.93
TOM1L1-208ENST00000570977 ARHGEF5Q12774 1597 aa9.21□□□□□ -0.93
TOM1L1-208ENST00000570977 NWD1Q149M9 1564 aa9.21□□□□□ -0.93
TOM1L1-208ENST00000570977 MROH1Q8NDA8 1641 aa9.21□□□□□ -0.93
TOM1L1-208ENST00000570977 SLC4A5Q9BY07 1137 aa9.21□□□□□ -0.94
TOM1L1-208ENST00000570977 C19orf44Q9H6X5 657 aa9.21□□□□□ -0.94
TOM1L1-208ENST00000570977 AFF2P51816 1311 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms